ID   AY370535; SV 1; linear; genomic RNA; STD; VRL; 2088 BP.
XX
AC   AY370535;
XX
DT   01-SEP-2004 (Rel. 81, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Havel river tombusvirus strain S coat protein and movement protein genes,
DE   complete cds; and unknown gene.
XX
KW   .
XX
OS   Havel River virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Tombusvirus.
XX
RN   [1]
RP   1-2088
RX   DOI; 10.1023/B:EJPP.0000021084.38938.c3.
RX   AGRICOLA; IND43646220.
RA   Koenig R.;
RT   "Isolation of two strains of a new Tombuvirus (Havel river virus, HaRV)
RT   from surface waters in Germany";
RL   Eur. J. Plant Pathol. 110(4):429-433(2004).
XX
RN   [2]
RP   1-2088
RA   Koenig R.;
RT   ;
RL   Submitted (18-AUG-2003) to the INSDC.
RL   Institut fuer Pflanzenvirologie, Mikrobiologie und biologische Sicherheit,
RL   Biologische Bundesanstalt fur Land- und Forstwirtschaft, Messeweg 11,
RL   Braunschweig D38104, Germany
XX
DR   MD5; e44e2c5c52db8574c487590ffa082e56.
DR   RFAM; RF00176; Tombus_3_IV.
DR   RFAM; RF00215; Tombus_3_III.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2088
FT                   /organism="Havel River virus"
FT                   /strain="S"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:254711"
FT   CDS             19..1161
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q67BT1"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q67BT1"
FT                   /protein_id="AAR26609.1"
FT                   /translation="MSIVTRNSDRALARLAAPAAMAGARMIVENKEVLWNGAKWIWANL
FT                   PKRKKGNKSNGGLISHPQTLPGAIAAPISYAYPVRGRKPKFQASKGSVRITHREYISVI
FT                   EGNTDGNFVVNNGSGASNDFSINPLNPFVFPWLVSIASNFDQYTFRSLKFEYIPLANTG
FT                   ASGRVALFFDKDSTDPGPDDRSALANYRHLSEISPWAIARLTAPTDNVKRFMADNTTAD
FT                   PKLINLGKVGWVTYASQFANLGDLFVEYTVDLYEAQPTAATLESLFRESTNGALTRVGL
FT                   PYFTLEVADGTSLVYQARVPGTYLVTVIFNNTTAGFAISISGGGIINSSFGVSSAGRTS
FT                   VTANVTITRNANLSITSLIGATNAQIFVAKANKDNAVAVV"
FT   CDS             1192..1761
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:Q67BT0"
FT                   /db_xref="InterPro:IPR005332"
FT                   /db_xref="UniProtKB/TrEMBL:Q67BT0"
FT                   /protein_id="AAR26610.1"
FT                   /translation="MDTEYGQVNKPWKELYKEATLGNKLTVNVGMEDVEVPLLPSNFLT
FT                   KVRVSMSGGYITVRRVRIKIIPLVSRKAGVSGKLYLRDISDTTGRKLHCTELLDLGKEV
FT                   RLTMQHLDFSVLARSDVPIVFGFEDLVSPYLEGRELYSVSLRWQFGLSAQCYSLPPAKW
FT                   KVMYQEDALKALKPSKRKASKTDSSV"
FT   CDS             1224..1742
FT                   /codon_start=1
FT                   /product="unknown"
FT                   /db_xref="GOA:Q67BS9"
FT                   /db_xref="InterPro:IPR004905"
FT                   /db_xref="InterPro:IPR036131"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q67BS9"
FT                   /protein_id="AAR28057.1"
FT                   /translation="MEGAIQGSDAREQANSERWDGGCGGTITPFKLPDESPGLHEWRLH
FT                   NSEESEDKDHPLGFKESWGFGKVVFKRYLRYDGTEASLHRALGSWERGSVNDAASRFLG
FT                   LGQVGCTYSIRFRGSCLTLSGGSRTLQRLIEMAIRTKRTMLQLTPSEVEGNVSRGRPEG
FT                   AKAFEKESE"
XX
SQ   Sequence 2088 BP; 571 A; 444 C; 558 G; 515 T; 0 other;
     aagtatacac aagcacacat gtctatcgta acaagaaata gcgatagagc tctggcgaga        60
     ctggccgcgc ctgccgctat ggcaggtgcg cgcatgattg ttgagaataa agaggtgtta       120
     tggaatggag ccaaatggat ttgggcaaat ttgcccaagc ggaagaaagg taataagagt       180
     aatggtggat tgatatcaca cccgcagacg ctccctggag ctatagctgc accaatctct       240
     tatgcctacc cagtcagggg acgcaagcct aaatttcaag cgtctaaggg gtcggtaagg       300
     atcacccatc gtgagtacat tagtgtgatc gagggtaata ccgatggtaa tttcgtcgtt       360
     aacaatgggt caggggcaag taatgatttt agcatcaacc cgctcaaccc ctttgttttc       420
     ccgtggttag ttagcattgc atccaacttt gatcagtaca catttcgcag tttaaaattc       480
     gagtatattc ctctagcgaa cacaggagcg tctggtagag tggcattatt ctttgataaa       540
     gatagcacag accctgggcc cgatgatcgg tcggccctgg cgaactatcg gcatcttagt       600
     gaaatctccc cttgggcgat tgccaggctc acagcaccaa ccgataatgt taagaggttt       660
     atggccgata atacaactgc tgatccgaaa ttgataaatc tcggaaaagt tggatgggtg       720
     acgtatgcgt cccaattcgc taacctgggt gacttattcg tcgagtacac cgtagacctt       780
     tatgaagcgc agcctacagc agctacactg gagtctctct ttagggagag tacaaatggg       840
     gcgctgacgc gtgttgggtt accctacttc actcttgagg tagcggatgg cacatcacta       900
     gtttaccagg cacgtgtccc tgggacttac ctcgttactg tgatcttcaa taataccact       960
     gctgggtttg cgattagcat ctctggcgga ggaattataa atagctcatt tggggttagt      1020
     tccgcgggta gaacgtccgt tacagcaaac gtaaccataa caagaaatgc taatctcagc      1080
     ataaccagtc tgattggagc aactaatgcc caaatattcg tcgccaaggc gaacaaggat      1140
     aatgcggtgg cagttgtgtg attgaagggg cttcttgaat acgaccaatt catggatact      1200
     gaatacggac aagtcaataa accatggaag gagctataca aggaagcgac gctagggaac      1260
     aagctaacag tgaacgttgg gatggaggat gtggaggtac cattactccc ttcaaacttc      1320
     ctgacgaaag tccgggtctc catgagtgga ggctacataa cagtgaggag agtgaggata      1380
     aagatcatcc ccttggtttc aaggaaagct ggggtttcgg gaaagttgta tttaagagat      1440
     atctcagata cgacgggacg gaagcttcat tgcacagagc tcttggatct tgggaaagag      1500
     gttcggttaa cgatgcagca tctagatttc tcggtcttgg ccaggtcgga tgtacctata      1560
     gtattcggtt tcgaggatct tgtctcacct tatctggagg gtcgcgaact ctacagcgtc      1620
     tcattgagat ggcaattcgg actaagcgca caatgttaca gcttaccccc agcgaagtgg      1680
     aaggtaatgt atcaagagga cgccctgaag gcgctaaagc cttcgaaaag gaaagcgagt      1740
     aagacagact cttcagtctg atactgccga agcgagtgaa tactgtttga gcatgcaggt      1800
     tactcttcgt attgttcggt ctacataatg acgagtcagg tcaggctccg cactaggttc      1860
     ggtcacctag gggatggaga catggaaggg atctcgtgcg ctataagtct aacgaaagtt      1920
     gagcttgcga catgggtcta tgcctggata agttgtgtag gttgccgcat acgatgaatt      1980
     ggatgcctgt ttacgactaa tagggaacac tagtggaaac agtaaaggac acggttcatc      2040
     tcacccttcg ggggggctat agagatcgct ggaagcacta ccggacaa                   2088
//