Dbfetch
ID AY366208; SV 1; linear; genomic RNA; STD; VRL; 6624 BP. XX AC AY366208; XX DT 27-APR-2004 (Rel. 79, Created) DT 27-APR-2004 (Rel. 79, Last updated, Version 1) XX DE Zygocactus virus X strain B1 replication-associated protein, triple gene DE block protein 1, triple gene block protein 2, triple gene block protein 3, DE and coat protein genes, complete cds. XX KW . XX OS Zygocactus virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6624 RX DOI; 10.1007/s00705-003-0268-5. RX PUBMED; 15098106. RA Koenig R., Pleij C.W.A., Loss S., Burgermeister W., Aust H., Schiemann J.; RT "Molecular characterisation of potexviruses isolated from three different RT genera in the family Cactaceae"; RL Arch. Virol. 149(5):903-914(2004). XX RN [2] RP 1-6624 RA Koenig R.; RT ; RL Submitted (12-AUG-2003) to the INSDC. RL Institut fuer Pflanzenvirologie, Mikrobiologie und Biologische Sicherheit, RL Biologische Bundesanstalt fuer Land- und Forstwirtschaft, Messeweg 11, RL Braunschweig D-38104, Germany XX DR MD5; 3768cd261481ea611b2b90df1afc52bf. XX FH Key Location/Qualifiers FH FT source 1..6624 FT /organism="Zygocactus virus X" FT /strain="B1" FT /mol_type="genomic RNA" FT /note="previously Cactus virus X" FT /db_xref="taxon:253701" FT CDS 85..4716 FT /codon_start=1 FT /product="replication-associated protein" FT /note="ORF1" FT /db_xref="GOA:Q6UNI6" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:Q6UNI6" FT /protein_id="AAR11542.1" FT /translation="MARVREVFSSITDSSLKAVIQEEAYKTIQTQLRLAASINPYAQPA FT DAADVLETLGIITNPLAVEAHTHGAAKAIENDMYNIVANYLPKENPVTFYYMKKGKLGK FT FRRGPQQGDLFVNSHFEPKDIARYPEETIVEHLESKPCTTSLAFMGDTLHFWSPKQLLT FT LFNASPKLKTLYATIVLPIEATHRLPSLHPSIYTLKYFGDFFMYIPGGHAGAAYTHHQK FT QLAWLFAGRLNGFGITLTIQFLESKGANHLLIIQRGKLLTPPLRTFGSDTPYIQIPPIF FT LPKDHNMTQPIPTVFAMKMFMYTKSLKEVTPRDLYAKMRQLLPDKELAKFSPAHIVHMM FT NYFFLLGKLDSVNHFENLLSGSIIRRTFKPLIVWWQHFKEKIKGPEDFTKLCKAIQWKP FT IDLTYNVEEFTLSLWDNFFKKQITPEGSDAEDFSDFWDPNSYNPLDKVDELDTEQLKAW FT DFLRAQQQPNPQPERFHDDPLEGKESAEAPSAAAGGDKGQAQAPQTNPPNPPATHKEST FT PEASSSNQAWSSGPKTLKTPHGVIIRPFSTDHNCEQTWEHFILSNLRLVDKLRGRRATF FT YSRNAAIKTYSYGNITHQALPWPESLTAITQALDIPNEHDHCLFQVFDKQSSIQFHADD FT EALIRPNSIITTVSIGHCELLTKEKSSGSVQKQILSGPVVHTMPEGFQSTHLHSIKSLQ FT EGRLSITFRTSIHCDRSTDLPWANRIPILKSAGFQGTQSQVNPNDGSLILPISDVKKLE FT KVSAGHPGLLKQLSSLHRAPTPFTYDPLRAKAFGSDVKNLRIDALLRHQPKGWLEAFSR FT KTEKEPRSIALTVIHGAGGSGKSQVIQDFLRNNPDEHITVVLPTNELRLDWVRKLPNAH FT LSTLKTFEKSLLCPASSTMIMDDYPKLPAGFIEAYIANNPGLEWLIITGDSKQSHHHEP FT NDGAMTSKIAPFTEIASGFCRYYLNATHRNRKDLANMLGVYSETEGRTVITMDSTILPG FT RHLLVPSMFKKQAYGELGHKVSTYAGCQGITANEIQILIDSDTPMCSQNVMYTALSRAV FT HAIHFVNTGVNNDAFWNKLSATPYLAAFLRLVREERVSEHKPTEDPPSQSAGPDTHFPV FT ENEAAFFDHITDAMPEKHERELFSNRDGFSNCVQTNDPIVQMFPHQQAKDETLFWATIE FT ARLKITSPEKNFAEFISKKHIGDVLFENYKRAMCLPKEPIAFDEALWNVCADEVQRTYL FT SKPLHLLKNGEGRQSPDFDPKAISLFLKSQWVKKVEKLGQPRIKAGQTIASFQQEAVML FT YGTMARYMRRVREVFQPKEIMINCELTPEELSKWALEHWNFNRNSYANDYTAFDQSQDG FT SMLQFEILKARHHSIPEVYIEGYLDLKCSSKTFLGILKIMRLTGEGPTFDANTECNIAF FT AHTKLKIPIGTAQLYAGDDCAFDYVPEEKPSFKTIETEVSLKAKPVIKRQIKGEWAEFC FT GMLVTPLGVIKDPIKTWAALKLAEKKGEMKDVRDSYERDVSLAYQHKDALHTIFSEEQS FT MAHQLTVRKIIKVGGGHVFSTFD" FT CDS 4716..5405 FT /codon_start=1 FT /product="triple gene block protein 1" FT /note="ORF2" FT /db_xref="GOA:Q6UNI5" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q6UNI5" FT /protein_id="AAR11543.1" FT /translation="MEHLISLLIANGYTRTDTPINKPLVVHAVAGAGKTTVIRQFLKEC FT PAVNAQTLGTPDKPNLTRKMIREYSMPKANHFNVLDEYCAQPLKGSWDAVFADPLQHPD FT FTLEPHFIKETSHRLGRSTCELISSLGIFMLPDAEDQPVNIQGVFESEIHGVVIALDEY FT IHKLAVRHGLKPFCPKATIGLQFPIVTALSSLPLEQVDDSTGLYIALTRHTQALHVRCP FT TEAHAAP" FT CDS 5368..5709 FT /codon_start=1 FT /product="triple gene block protein 2" FT /note="ORF3" FT /db_xref="GOA:Q6UNI4" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q6UNI4" FT /protein_id="AAR11544.1" FT /translation="MSGVPLRLTPPPDYTKTLLPLTVGLGLTLVIFSLTRSTLPTVGDS FT SHSLPHGGWYRDGTKLVHYHKPQSPGTSWTPILLVLGLSAAIYVSHLFSTRSCARHCPH FT CGAKHTESA" FT CDS 5630..5818 FT /codon_start=1 FT /product="triple gene block protein 3" FT /note="ORF4" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q6UNI3" FT /protein_id="AAR11545.1" FT /translation="MFLTYLVLGAVLGIALTAVLNTLNQPNCVLVFTGERTVVSGCEHL FT PHLSEVINSLNNRLSFN" FT CDS 5841..6521 FT /codon_start=1 FT /product="coat protein" FT /note="ORF5" FT /db_xref="GOA:Q6UNI2" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q6UNI2" FT /protein_id="AAR11546.1" FT /translation="MSNTAGVQSSQTSGVRAPATPSPFQTLTAAQLAALTLGVTSSLLP FT SPEELVQLSNALTALGASSSNVSQVALEVVNYCFDNGSSPETVFKGNSNLLQIPLSKVA FT QAITQVTTLRQFCRYFAKLIWNYRVSRNLPPAAWEAWAYKPEQKFAAFDFFDGVLNEAA FT LQPTDGLVRLPNEAERLANQTNRNVHLFESNAQKSRVLTTSALVTKGLQGSETPRIQFL FT PGPE" XX SQ Sequence 6624 BP; 1736 A; 2069 C; 1479 G; 1340 T; 0 other; gaaaacccac cccaactcaa ccaaactcac tcacacctat tcataacaga aaggagctgc 60 ccacgcaggc atattttctg agggatggct cgtgtgcgtg aagttttctc atccatcacc 120 gactcctcgc tcaaagccgt aattcaggag gaagcataca agactatcca aactcaatta 180 cggctagcag catccatcaa cccctacgcc cagccggcag atgccgccga cgtgctagag 240 acactaggca tcattactaa cccattggct gtcgaggcac atacgcatgg ggcagccaaa 300 gcaatagaaa atgatatgta caatatagta gctaactatc tgcccaagga gaaccctgta 360 acattctatt acatgaagaa aggaaaactg ggcaaattcc gacggggacc gcaacagggt 420 gacttgtttg ttaactcaca ctttgagcca aaagacattg cgcgttaccc cgaggaaacc 480 attgtggagc acctggagtc taaaccgtgc accacctctc tggcgtttat gggggacact 540 ctacacttct ggtctccaaa gcagctcctc accctcttta atgcgagccc aaagctgaag 600 accctctacg cgacgattgt actgcccatc gaggctactc acaggctccc ttccctccac 660 ccgtccattt acaccctcaa atacttcggg gacttcttca tgtacatccc cggcggccac 720 gctggcgctg cctacacgca tcatcaaaag cagctcgcgt ggctcttcgc cggccggctc 780 aacgggtttg gcatcactct cactatccag ttcctagaat cgaaaggggc caatcacctg 840 ctgataatcc agaggggaaa gctactcacg ccaccgctgc gcacatttgg ctcagacacc 900 ccctacattc agatcccccc catcttcctg cctaaggacc acaacatgac ccagccgatt 960 ccaaccgtct tcgcaatgaa aatgttcatg tacacgaagt cgctcaagga ggtaacccct 1020 cgagacctct acgcgaagat gcgtcagctc ctacctgaca aggaactggc aaaattttcc 1080 cctgcacata ttgtccacat gatgaactat tttttccttc tcggcaagtt ggattcggtc 1140 aaccattttg agaatctcct gtcaggctca atcatccgaa gaaccttcaa gccactcatt 1200 gtatggtggc aacacttcaa ggagaaaatc aaaggcccgg aggatttcac caagctctgc 1260 aaggcaattc agtggaaacc catcgacctg acctacaacg tagaggagtt cacgctgagt 1320 ctctgggaca acttcttcaa gaagcagatc accccagaag ggagtgacgc cgaggacttc 1380 tccgacttct gggaccccaa ctcctacaac ccacttgaca aggtcgatga gctcgacact 1440 gagcagttga aagcctggga ctttctacgc gcccaacaac agcccaatcc tcagcctgag 1500 cgattccacg atgacccact cgaggggaag gagagtgcag aggcccccag cgcggctgcg 1560 ggtggcgaca agggtcaagc acaagcacca caaaccaatc cgccaaaccc ccctgccact 1620 cacaaggaga gcacgccaga ggccagctcc agcaatcaag cttggtccag cggccctaag 1680 actctcaaga cgccacacgg agtcatcatt cggcccttca gcactgacca caattgtgaa 1740 caaacatggg agcattttat cctcagtaac ctgcgactgg ttgacaagct gagaggccgg 1800 cgcgctacct tctactccag gaatgcggcg atcaagactt acagttacgg gaacatcacc 1860 caccaggccc ttccatggcc tgagagtctg accgccatca cgcaagccct ggacatcccg 1920 aacgagcatg atcactgcct cttccaggtc tttgacaagc aatcctccat ccaattccac 1980 gcagacgatg aggcactcat caggcccaac tccatcatca ccaccgtcag tataggtcac 2040 tgtgagctgc tcacgaaaga gaagagcagt ggctccgtgc agaaacagat cctcagcggg 2100 cctgtcgttc acaccatgcc tgagggcttc cagagcaccc acctccactc catcaagtca 2160 cttcaagagg gaaggctctc catcactttc cgaaccagca tccactgtga caggtccact 2220 gacctgccct gggccaaccg gatccccata ctcaagtcag caggctttca aggcactcag 2280 agccaggtca accccaatga cggctccctc atcctcccca tcagtgacgt caagaaactc 2340 gagaaggtca gtgccggaca cccagggctg cttaagcagc ttagctcact ccaccgtgcc 2400 cccacaccat tcacctacga cccactgcga gccaaggcat tcggatcaga cgtgaaaaat 2460 ctgcggattg acgcattact cagacaccag ccgaagggat ggctcgaagc cttctccagg 2520 aaaacagaga aagagccgcg ctccatcgca ctaaccgtca tccatggagc ggggggaagt 2580 ggcaagtcgc aagttatcca ggatttcctc aggaacaacc ctgacgagca tatcaccgtg 2640 gtactgccca ccaatgagct tcgcctcgac tgggtccgga aattgcccaa tgcgcacctt 2700 tccaccctca agaccttcga gaagagcctc ctctgcccag ccagctccac catgatcatg 2760 gatgactacc ccaaattgcc agcaggcttc atcgaagctt acatagccaa caaccctggg 2820 ctggagtggt tgatcatcac aggtgactct aaacagagcc accaccacga gccaaatgac 2880 ggggccatga ccagcaagat tgcccccttc actgaaattg cttccgggtt ctgccgctac 2940 tacctcaacg caacccatcg caaccggaag gaccttgcta acatgctggg ggtctactcc 3000 gagactgaag gacgcactgt gataactatg gactcaacca tcctgcccgg acgccacctc 3060 ctagtgccat cgatgttcaa aaaacaggcg tacggggagc ttgggcacaa agtctcgaca 3120 tatgccggct gccaagggat cactgccaat gaaattcaga tcctcatcga ctcggacact 3180 cccatgtgct ctcaaaatgt gatgtacacg gcactcagcc gcgccgtaca cgctatccac 3240 tttgtaaaca cgggagtcaa caatgatgct ttctggaaca agctgagtgc caccccctac 3300 ctggcagctt tcctacggct ggtcagagaa gagagagtca gtgagcataa acccacagag 3360 gacccaccct cccagtctgc aggccccgac acccacttcc ccgtggaaaa tgaagcggca 3420 ttctttgacc acatcactga cgccatgccc gagaaacatg agagagagct cttctccaac 3480 cgtgacggct tcagcaactg tgtgcaaaca aatgacccaa tcgtccagat gtttccccac 3540 caacaggcaa aagatgagac actcttctgg gctacaatcg aggccaggct caagatcacc 3600 agtcctgaaa agaacttcgc agagttcatc agcaagaagc acattgggga cgtactcttc 3660 gagaactaca agagagccat gtgtctccca aaggaaccca tagctttcga tgaggcactc 3720 tggaacgtct gtgctgacga agtgcaaaga acctacctct ccaaacctct tcacctgctt 3780 aaaaatggcg agggccgcca atcacctgac tttgacccca aggccattag tctattcctg 3840 aaatctcaat gggtcaagaa agtggagaaa ttaggccagc cccgaatcaa agcgggccag 3900 accatcgcct ccttccaaca ggaggcggtc atgctctacg gaacaatggc gaggtatatg 3960 agacgagtgc gcgaggtctt ccaacccaag gaaatcatga tcaactgtga gctcacccct 4020 gaggagctgt ctaagtgggc cttggagcac tggaatttca acaggaactc ctacgccaat 4080 gactacacgg ccttcgacca gtcgcaagat ggctcaatgt tgcagttcga gatactcaaa 4140 gcacgccacc actccattcc cgaagtgtac attgagggtt acctggacct caagtgctcc 4200 tccaaaacct ttctgggtat tctcaaaatc atgaggctga ccggcgaggg ccccaccttc 4260 gatgccaaca ctgagtgtaa tattgctttc gcccacacga aactgaagat tccaatcggc 4320 acggcccagc tctacgccgg tgatgactgc gctttcgatt atgtcccaga ggaaaagcca 4380 agcttcaaga ccatagagac ggaagtctct ctcaaagcga agccagtgat caagcgccaa 4440 atcaaagggg aatgggctga gttctgcggc atgctagtca ccccgctggg agtgatcaag 4500 gatccgatca aaacttgggc cgcactcaaa ctcgctgaaa agaaaggtga gatgaaagac 4560 gtcagagaca gctatgaaag ggatgtcagc ctggcctatc agcacaagga cgccctccat 4620 acaatcttct cagaggagca gtccatggcc catcaattaa ccgttcgaaa aattatcaag 4680 gtaggcggag gtcacgtctt ctcaaccttt gactaatgga gcacctcatc tctcttctaa 4740 ttgctaacgg ttacactagg actgacacac ccatcaataa gccacttgta gtgcatgcgg 4800 ttgcgggagc gggcaagacc acagtcatcc gccagtttct taaggagtgc cctgcggtca 4860 acgctcaaac tctgggtacc cctgacaaac ccaacctcac tcggaagatg attcgtgagt 4920 actccatgcc gaaagctaac cacttcaatg tactagatga gtactgcgcg cagcccctga 4980 agggcagttg ggacgcagtc tttgccgacc cgctacaaca ccctgatttt acccttgagc 5040 ctcacttcat caaagagacc tcccacagac tggggcgcag cacctgtgaa ctcatttcca 5100 gtctggggat cttcatgctt cctgacgcgg aagatcagcc agtgaacatc cagggggttt 5160 tcgaaagcga aatccacggg gttgtcattg ctctggatga gtacatccac aagcttgccg 5220 tacgccacgg actcaagccg ttctgcccca aagccaccat cgggctgcaa ttccccatcg 5280 taaccgccct ctcctcactg ccccttgagc aagttgacga ctctaccggg ctttacattg 5340 cactgactcg gcacacacaa gccctccatg tccggtgtcc cactgaggct cacgccgccc 5400 cctgactaca ccaagacact tctcccacta acagtaggat taggactaac tcttgtcatt 5460 ttctccctca cacgctctac tctgccgacg gtcggcgatt catcccacag tcttccccac 5520 ggaggctggt accgcgacgg cactaagctc gtccactacc acaagccaca aagccctggt 5580 actagctgga cacccatcct cctggtgctc gggctttctg cagccatcta tgtttctcac 5640 ttatttagta ctaggagctg tgctaggcat tgccctcact gcggtgctaa acacactgaa 5700 tcagcctaac tgtgtcttgg tgttcacagg cgagcgcact gttgtgagcg gctgtgagca 5760 cctccctcat ctctctgagg tcattaactc tttaaacaac cgcttaagtt tcaactaact 5820 gtgaagttca agcaatcgag atgtctaaca ctgcaggagt tcaaagctct caaacctccg 5880 gggtgagagc tccggccaca ccaagcccct tccagacact aactgcagct cagctcgcag 5940 cactaacttt aggagtcacc agctcgcttc taccctcccc tgaggagctc gtgcagttgt 6000 cgaatgcact gacagcacta ggcgcctcca gctccaacgt ctcccaagta gcactagaag 6060 tagtaaacta ctgtttcgac aacgggtcct cacccgaaac tgtcttcaaa ggtaactcga 6120 acctgctcca gatacccctc tcaaaggtgg cccaggccat tacacaggtc accacactcc 6180 gacagttctg ccgctacttc gcaaaactca tctggaacta cagagtgtcc cgcaatctcc 6240 ccccagctgc ctgggaggcc tgggcctaca aacccgaaca gaaattcgca gccttcgact 6300 tcttcgacgg cgtgctcaat gaggctgccc tccagcccac ggacggtctc gtacgccttc 6360 caaatgaggc tgagaggctt gccaaccaga ctaatcggaa tgtccacctc ttcgagagca 6420 atgcccagaa aagtcgagta ctgaccacat cagctctggt cacaaaaggc ctgcaaggtt 6480 ccgagactcc ccgaattcag ttcctaccgg gtcccgaatg agaaataaac tccaggctcc 6540 agcagtagcc tcccactggg ttccaactgt gtctatccag cttaacttaa taagcctagc 6600 cttctgtttt aatgcacatt tcag 6624 //