ID AY366207; SV 2; linear; genomic RNA; STD; VRL; 6633 BP. XX AC AY366207; XX DT 27-APR-2004 (Rel. 79, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 2) XX DE Schlumbergera virus X strain K11, complete genome. XX KW . XX OS Schlumbergera virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6633 RX DOI; 10.1007/s00705-003-0268-5. RX PUBMED; 15098106. RA Koenig R., Pleij C.W.A., Loss S., Burgermeister W., Aust H., Schiemann J.; RT "Molecular characterisation of potexviruses isolated from three different RT genera in the family Cactaceae"; RL Arch. Virol. 149(5):903-914(2004). XX RN [2] RP 1-6633 RA Koenig R.; RT "Complete nucleotide sequence of Schlumbergera virus X RNA"; RL Unpublished. XX RN [3] RP 1-6633 RA Koenig R.; RT ; RL Submitted (12-AUG-2003) to the INSDC. RL Institut fuer Pflanzenvirologie, Mikrobiologie und Biologische Sicherheit, RL Biologische Bundesanstalt fuer Land- und Forstwirtschaft, Messeweg 11, RL Braunschweig D-38104, Germany XX RN [4] RC Sequence update by submitter RP 1-6633 RA Koenig R.; RT ; RL Submitted (11-DEC-2008) to the INSDC. RL Institut fuer Epidemiologie und Pathogendiagnostik, Julius Kuehn Institut, RL Bundesforschungsinstitut fuer Kulturpflanzen, Messeweg 11, Braunschweig RL D38104, Germany XX DR MD5; ec6eb8a2b0b864fd807a89c75e4eafc7. DR EuropePMC; PMC4395048; 25792054. XX CC On Dec 11, 2008 this sequence version replaced gi:38146340. XX FH Key Location/Qualifiers FH FT source 1..6633 FT /organism="Schlumbergera virus X" FT /strain="K11" FT /mol_type="genomic RNA" FT /note="previously Cactus virus X" FT /db_xref="taxon:253700" FT CDS 84..4721 FT /codon_start=1 FT /product="replication-associated protein" FT /note="ORF1" FT /db_xref="GOA:Q6UNJ1" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:Q6UNJ1" FT /protein_id="AAR11537.2" FT /translation="MARVREVFSSLTDSSLKAVIQEEAYKTIQMQLRLASTINPYAHSS FT DSADHLENLGIITNPLAIELHTHGAAKAIENDMYNIVANYLPKDNPVSFFYMKKGKLGK FT FRRGPHQGDRFINSHFEPKDIARYPMETVVEHLEKQPCTTKLAFMGDTLHFWSPTQLLT FT LFKCSPTLQTLYATLVLPIEAVDQLSSLHPSIYTLKYHGDFFMYLPGGHAGAAYTHHKR FT QLAWLFLGRLTDGQTTLTMQILESKGANHLVIIQRGHYETPPLRTFGSDIPYVKLPKIF FT LPSQHNMNQPIPTTFAMKMFMYCKSLKEVTPRDLYAKMRQLLPDKELAKFSPTHIVHLM FT NYFFLIGKLESVNSFEEILSGSAVRRTFKPVIVWWQHFKQKIFGQDDFLKLLQALQWKA FT VDLTYKVEEFNERSWFDFLKEKIEKVAPVGDEDDDFWDPKSYNPLDTTEAPSIEQLKAW FT DYLRNRGENKAPEDFHPDPLENAPKEKTKEIDQTETQENGKQENSEDLSYKASSSSSAE FT KRPDQDEPLPPNSEVNACSTTAHGVPLVRFNPDRNCEETWAQFIKSHLRLVDTVGSRRV FT TLYSRNNKIKTYNYGSVTHKAQPWPEALTAISQHFNIPIEHDHCLYQVFKKQASINFHA FT DDEALILKDSVITTLNIGHAELRTKRIADGDLSFTSLTGVCVYTMPQGFQSTHKHAVTS FT LEEGRISITFRTSVHHAETSVLPWQAWLPILNVAGFKGTQSQVNPNDGSLISPILDIKK FT LEKTPASHPGINEVLTCIHRLPTPFTPDPLRAKAFGSDVKNLRIGALLKHQSKEWLEAF FT SRKTEMPPRTIGLSVIHGTGGSGKSHALQDFLRNNPEERITVILPTNELRLDWQRKLPQ FT AHPNSLKTFEKSLLVGASSVVIMDDYTKLPAGFIEAYINTNSGLETLILTGDPNQSFHH FT EPNENALTSKIAPFSEIAQSFSRYYLNATHRNKRDLANMLAVYSEVEGTTNITMSSTVL FT PGRHLLVPSMYKKQAYGEMGHKVSTYAGCQGITAPEIQILIDNDTPMCSQQVMYTALSR FT AVHAIHFVNTGVTNDAFWEKLAATPYLAAFLRLVREEKTRQPSPTEDPPAQPPAPETHF FT PVENPKNFFDKIIENMPDKHSRELFSEKDGHSNCVQTEDPIVQMFPHQQARDETLFWAT FT IEARLKVSSPEKNFEEFVSKRHIGDVLFENYKLAMGLPKEPIQFDEGLWNVCADEVQRT FT YLSKPLHMLKNGEGRQSPDFDPKTIALFLKSQWVKKVEKLGQPRIKAGQTIASFQQEAV FT MLYGTMARYMRRVREVFQPKDIMINCETTPEALSQWALENWNFNRTSYANDYTAFDQSQ FT DGAMLQFEILKARHHSIPDVYIDGYVELKCCSKTFLGVLKIMRLTGEGPTFDANTECNI FT AFAHTKLKIPIGTAQLYAGDDCAFDFAPEEKQSFKKIETQISLQAKPTYKRQIKGEWAE FT FCGMIITPLGVMKDPIKTWASLELAARRGEIKEVKDSYARDVALAYQHKDRLHEIFSEE FT QSMAHQLTVRKLIKVGSGRIFSTYD" FT CDS 4721..5410 FT /codon_start=1 FT /product="triple gene block protein 1" FT /note="ORF2" FT /db_xref="GOA:Q6UNJ0" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q6UNJ0" FT /protein_id="AAR11538.1" FT /translation="MDALISLLTTNGYSRTDLPISKPLVVHAVAGAGKTTLIREFLKLH FT SSINAQTLGTPDKPNLSRKMIRQYSMPKANHFNILDEYCAQPLKGSWDAVFADPLQHPD FT FAVEPHFIKETSHRLGAQTCQLISDLGILIYPGAEDQPVSRKGVFEGELYGTVIALDSY FT IRDLAQRHGVKTLCPKATIGQQYPVVTVLSSLPLESVENSTELYIALTRHTQELHVRCP FT NPPHPST" FT CDS 5373..5705 FT /codon_start=1 FT /product="triple gene block protein 2" FT /note="ORF3" FT /db_xref="GOA:Q6UNI9" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q6UNI9" FT /protein_id="AAR11539.1" FT /translation="MSGAPIHLTPPPDQTKVIFPLTVGLGLTLVVYSLTRSTLPHVGDS FT THSLPHGGTYRDGTKSVNYYQPSHPVSNHLPLIFVLGLIVAIYVSTLFSNRSRGRHCNH FT CGAKHA" FT CDS 5635..5817 FT /codon_start=1 FT /product="triple gene block protein 3" FT /note="ORF4" FT /db_xref="GOA:Q6UNI8" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q6UNI8" FT /protein_id="AAR11540.1" FT /translation="MFLLYSLIGVVVGIAIIVVLNTLNSPSCTIILNGHSTIIQGCTQL FT SNLDSVIEALNHRLS" FT CDS 5836..6513 FT /codon_start=1 FT /product="coat protein" FT /note="ORF5" FT /db_xref="GOA:Q6UNI7" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q6UNI7" FT /protein_id="AAR11541.1" FT /translation="MSTTPSSASNSIGSRVPTAQGPFASLTSSQLNVLPLSVTSSLLPS FT PEDLVTISQAFITLGAAQTNLTQVSLELVNYCFDNGSSPETVFKGNSATLGVPLSKVAN FT AVTQYTTLRQFCRYFAKLIWNYRLEKNKPPAAWEAWAYKPEQKFAAFDFFDGVLNEAAL FT NPMDGLVRIPNEAERLANQTNRNVHLFESNAQKSRALTTSALVTKGLQGSESPKIQLLP FT SPE" XX SQ Sequence 6633 BP; 1957 A; 1746 C; 1380 G; 1550 T; 0 other; gaaaaccaac ccaaacccaa accaacccac tcacacccat tctaaaagaa aaggagcaac 60 cccagaggtt tatatttctt gagatggctc gtgtgcgtga ggttttctct tctctcactg 120 actcttcgct aaaagctgta attcaagagg aagcctacaa gactatccaa atgcaattgc 180 ggctagcgtc caccatcaat ccatatgcac atagttctga ctcagctgat cacctagaaa 240 acttaggaat tatcactaac cctttagcca tagagttgca cacccatggt gctgccaaag 300 ctatagagaa tgatatgtac aacattgtgg ccaactacct tccaaaagat aacccagttt 360 ctttttttta catgaagaaa ggaaaacttg gaaagttcag aaggggtcca caccaagggg 420 accggtttat taattcgcat ttcgaaccaa aagatatagc acggtaccca atggaaactg 480 ttgttgaaca tctagagaag cagccctgca ccacaaaact tgctttcatg ggtgacactc 540 tccatttttg gagccccaca caactgctca cattgttcaa gtgcagccct actcttcaga 600 ctctctacgc tacacttgtt ttgcccatag aagcagtgga tcagctctct tctctgcacc 660 cctcaatcta cacgctcaag tatcatgggg atttttttat gtatctacca ggaggccacg 720 ctggagcagc ctacactcac cacaaaagac aactagcatg gcttttcctt ggtagactca 780 ctgatggcca aactacgctc acaatgcaga tactggaatc aaaaggagcg aatcacttag 840 ttataatcca aagggggcac tatgagacgc cacctctgag aactttcgga tctgacattc 900 catatgtcaa gctccccaaa attttcttac catcacagca caacatgaac caaccaatcc 960 caacaacatt tgcaatgaaa atgttcatgt actgtaagag tctgaaagaa gtcacaccac 1020 gtgacctcta tgcaaaaatg aggcagctcc taccagacaa agagcttgca aagttttccc 1080 cgacccacat tgtgcactta atgaactact tcttcttgat cggcaagttg gagtcagtca 1140 acagttttga agaaattctt tcggggtctg cagttcgaag gaccttcaag ccagtaatcg 1200 tttggtggca gcacttcaag caaaagatct tcggacaaga tgatttcctt aagctgctcc 1260 aagccttaca gtggaaagct gttgatttaa catataaagt tgaggagttc aacgaaaggt 1320 cctggttcga tttcctaaaa gaaaaaattg agaaagtagc tcctgtggga gatgaggacg 1380 acgacttttg ggacccaaag agctacaatc ccttggacac cactgaggct cccagtattg 1440 aacaactcaa agcttgggat tatctgagaa atcggggaga gaataaggcc ccagaagact 1500 tccaccctga cccccttgaa aacgctccca aggagaaaac gaaagagatt gatcaaaccg 1560 aaactcaaga aaatgggaag caagaaaatt cagaagactt gagctacaaa gccagcagtt 1620 cctcctctgc tgagaaaagg cctgatcagg acgagccttt gccccccaac tctgaagtga 1680 atgcgtgcag cacaactgca catggagtcc cactagtaag gtttaaccca gacagaaact 1740 gtgaagaaac ctgggcgcaa ttcatcaagt ctcatcttag actagtggac acagtcggaa 1800 gcaggcgtgt gaccctgtat tctcgaaata acaagatcaa gacatacaac tatggatctg 1860 tcacacacaa ggcccagccc tggcccgagg cactcactgc catctcgcag cacttcaaca 1920 ttccaatcga acacgatcat tgcttatatc aagtgttcaa gaaacaggcc agcatcaatt 1980 tccatgcaga tgatgaggca ctgatactga aggattctgt gatcaccact ctgaacattg 2040 gacatgcaga acttcgaact aagaggatcg ctgatggtga tttaagcttc acatcactaa 2100 ctggggtctg cgtgtacaca atgcctcaag gctttcaatc cacccacaaa catgcggtca 2160 catcgctaga ggagggtagg atttccatca ctttcagaac cagtgtccat catgctgaaa 2220 cctcagtgct cccgtggcag gcttggctcc caattctgaa cgttgctgga ttcaaaggca 2280 ctcaaagcca agtcaacccg aatgacgggt cgctcatctc accgattctg gacatcaaga 2340 aactggaaaa gacccctgct tctcaccctg ggatcaatga agtgttaact tgtattcatc 2400 gcctccccac tcccttcact cctgacccat tgcgagcaaa agcatttgga tctgatgtaa 2460 agaatctacg cattggagct ctattgaaac atcagtccaa agagtggctt gaggcattct 2520 cccgaaaaac tgaaatgcca ccccgcacca ttgggctcag cgtcattcac ggtactggtg 2580 gaagcggaaa gtcccatgcc ctacaagatt tcctgagaaa taaccctgag gagcgaatca 2640 ctgtcatcct accaacaaat gaactgagat tggactggca gaggaaattg ccgcaggcac 2700 atccaaattc cttgaaaacc tttgagaaaa gcttactagt cggcgcctcc tctgtcgtga 2760 tcatggatga ttacaccaaa ctgcctgcgg ggttcatcga ggcctatatc aacaccaact 2820 caggtctgga aaccctaatt ctgacaggtg accccaatca gagcttccac cacgagccca 2880 atgaaaatgc tctgacatca aaaattgccc ccttctccga aattgcccaa tctttctcca 2940 ggtactacct aaatgccaca caccgcaaca agagagattt ggcaaacatg ctggctgttt 3000 attctgaggt ggagggaacc accaacatta caatgtcgag cactgttctc ccaggccgtc 3060 acttgctagt gccatcaatg tataagaaac aggcctacgg agaaatgggc cacaaagtgt 3120 caacttatgc aggctgtcaa ggaatcactg ccccagagat tcaaattttg attgacaatg 3180 acacgcccat gtgctcccaa caagtgatgt acacagcttt gagcagggca gttcacgcaa 3240 ttcacttcgt gaacaccggg gtaaccaatg atgccttctg ggagaaactg gcagcaactc 3300 cataccttgc ggcgtttctt cggctcgtca gagaggaaaa gactagacaa ccgagcccca 3360 cagaagaccc cccagcccaa ccaccagccc ctgagactca tttccctgta gagaatccaa 3420 agaatttttt cgataaaatc atcgagaaca tgccagacaa acattccagg gaactctttt 3480 ctgaaaagga tggtcacagc aactgtgtgc agacagaaga tccaattgtg cagatgtttc 3540 ctcaccagca ggccagagac gagactctct tctgggccac aattgaagcc cgactgaaag 3600 tctccagccc ggaaaagaat tttgaagaat ttgtgagcaa gaggcatata ggggatgtgc 3660 tctttgaaaa ctacaagctg gccatgggac tcccgaagga gccgattcaa ttcgatgagg 3720 gcttgtggaa tgtctgtgca gatgaagtgc aacgaactta cctatctaaa ccacttcaca 3780 tgttgaaaaa tggagagggc cggcagtcac ctgattttga ccccaagact attgcactgt 3840 ttctgaaatc tcaatgggtg aagaaagtgg agaagctagg acaaccgaga atcaaagctg 3900 gccagaccat agcctcgttc caacaggagg ctgtcatgct ctacggcacc atggcccgtt 3960 acatgagaag ggtgagagag gttttccaac caaaggatat catgatcaat tgtgagacaa 4020 cacctgaagc actctctcaa tgggccctcg aaaattggaa tttcaaccgc acttcttatg 4080 ccaatgatta cactgccttt gaccaatccc aggatggtgc gatgctccaa tttgaaattt 4140 taaaggcgcg ccaccattcc atacccgatg tttacattga cgggtatgtc gagttgaaat 4200 gctgttcaaa aactttcctg ggcgtgctca aaattatgag gctcactgga gaaggcccca 4260 cttttgatgc caacacagag tgcaacattg ccttcgctca caccaaattg aaaattccaa 4320 taggcacagc acagctgtac gcaggtgacg actgtgcttt cgactttgct cccgaggaga 4380 aacagagctt caagaaaatt gagacgcaga tttcactcca ggccaaacca acatacaaac 4440 gacaaatcaa aggagagtgg gcggagttct gcgggatgat catcacgccc ctcggggtca 4500 tgaaggaccc tatcaaaaca tgggcgtcac tcgagcttgc cgcccgaaga ggcgaaatta 4560 aagaagtgaa ggatagttat gctagggatg tggcattggc ctaccaacac aaagacagat 4620 tgcatgagat cttttcagag gagcaatcca tggctcatca attaaccgtt cgaaaactga 4680 tcaaagttgg tagtggaaga atcttctcga catacgactg atggacgctc tcatctcctt 4740 gctaacaact aacggttaca gtaggactga tctgcccatt tctaagcctt tagttgtaca 4800 tgctgtagct ggcgccggga agaccacact catacgggag ttcttgaaac tgcactcgtc 4860 catcaatgca caaactctcg gcactcctga caagcccaat ctctccagga aaatgatcag 4920 gcaatactcg atgcctaaag ccaaccactt caacatcctt gatgagtact gtgcgcagcc 4980 gttgaaaggt tcttgggacg cggttttcgc cgaccccctg caacacccgg actttgcagt 5040 ggaacctcac ttcatcaaag aaacttcaca caggcttggt gctcaaacat gccaactcat 5100 ctcagattta ggtatcctca tctatcccgg tgccgaagat caaccagttt ctaggaaagg 5160 ggttttcgaa ggagagctct acggcactgt gattgctctg gactcataca ttagagattt 5220 ggcccagcga catggtgtga aaactctgtg cccgaaagcc accataggac agcaataccc 5280 agtggtcacc gtcctgtcat cactaccatt ggaaagtgtc gaaaactcca cagagctcta 5340 cattgcactg acccgacaca ctcaagagct tcatgtcagg tgccccaatc cacctcaccc 5400 ctccacctga ccagacaaaa gtgatcttcc cattaactgt aggactagga ttaaccctcg 5460 tagtttattc cctaactcgt tccaccctgc cccacgtagg ggattctact cactctctcc 5520 cacacggagg cacttatcgt gacggaacga aaagtgtcaa ctactaccaa ccatcccacc 5580 cagtgtccaa ccatctccca ctgatctttg tcttagggct aattgtagct atctatgttt 5640 ctactctatt ctctaatagg agtcgtggta ggcattgcaa tcattgtggt gctaaacacg 5700 cttaacagtc ctagttgcac catcattctc aacggccatt ccacaataat ccaaggctgt 5760 acccagctta gtaatttaga tagtgtcata gaagccctta atcatcgctt aagttagaac 5820 ctagtttgaa taataatgtc gaccactcca tcttcagcct ctaactctat tggatccagg 5880 gtcccaactg cccaaggacc ttttgcttcc ctcacatcga gtcagttaaa tgtcctccca 5940 ctctcagtga ccagttccct cctaccatca ccagaggatc tagtgacaat ctcccaagct 6000 ttcatcactc ttggagcagc ccagaccaat ctcacacaag tctctctgga gcttgtcaac 6060 tactgctttg acaatgggtc atcaccggaa actgttttca aaggtaactc tgccacactg 6120 ggtgttcctc tttccaaagt agctaacgcg gttacgcagt acactactct gcgccaattc 6180 tgccgctatt ttgcaaagct gatatggaac tatagactgg aaaagaacaa acccccagca 6240 gcttgggaag cttgggcata caagccagag cagaagtttg ctgcctttga cttctttgat 6300 ggggtactca atgaagctgc tctcaatcca atggatggcc tggtacgcat acccaatgaa 6360 gcagagagat tggcaaacca aacgaatcgc aatgtgcacc tcttcgagag taatgcacaa 6420 aagtctagag cactcaccac ttcagccctg gtcaccaagg gtctccaagg atctgaaagc 6480 ccaaagattc agttattacc atcccctgaa taaataacta tctcaaggcc tcagcggtgg 6540 cctcccactg ggttccaacc gtgtctatca actcaactta acgagtcaag ccttctgttt 6600 taatgcaagt ttcagaaaaa aaaaaaaaaa aaa 6633 //