ID AY328479; SV 1; linear; genomic RNA; STD; VRL; 2639 BP. XX AC AY328479; XX DT 02-JUL-2004 (Rel. 80, Created) DT 02-JUL-2004 (Rel. 80, Last updated, Version 1) XX DE Cryphonectria cubensis mitovirus 2a RNA-dependent RNA polymerase gene, DE complete cds. XX KW . XX OS Cryphonectria cubensis mitovirus 2a OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2639 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT "Molecular characterization of mitoviruses co-infecting South African RT isolates of the Eucalyptus canker pathogen Cryphonectria cubensis"; RL Unpublished. XX RN [2] RP 1-2639 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT ; RL Submitted (24-JUN-2003) to the INSDC. RL Department of Genetics, Forestry and Agricultural Biotechnology Institute, RL University of Pretoria, Pretoria, Gauteng 0001, Republic of South Africa XX DR MD5; 7940ec87b2e46ff4d66dabc4871ff8e0. XX FH Key Location/Qualifiers FH FT source 1..2639 FT /organism="Cryphonectria cubensis mitovirus 2a" FT /mol_type="genomic RNA" FT /db_xref="taxon:249055" FT CDS 893..2563 FT /codon_start=1 FT /transl_table=4 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q6EH18" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q6EH18" FT /protein_id="AAR01973.1" FT /translation="MKLRLKGSLKAGPNGKISLLTSLLDALAFWSDPLRVIHFIWFNIR FT CYGYFWGLIWSMWLIFIMIISLPYYLIALCLGARAPVMGQLATVYDQAGKARIVASTNS FT WIQCSLFGLHNKIFSILRSIPQDGTFDQNKPFDLLLESLQPGYMLYGFDLSAATDRLPI FT AFQKDILNHLGYPGGPWRRLLGIKYNSPCGFISYAVGQPMGAYSSFAMLALTHHVLVQV FT AAQKAGFSDRFTDYCILGDDIVIANSLVAEAYKSLIFDLGLEISESKSVISGTFTEFAK FT KLRGPLMDISPIGAGLILYSLRNKYYICVLVFEILERGLCMWYDVYPQLLSLLPKIYRR FT YFKLCDWFIALHLRRREHLGDQDHEILNPRIAYFNVFLNKEKIISLLEIMWNSTVRDWF FT RLWNSIKYTLNKGLFISQARVGLPDWSELIFFPLLPSTYIMIMSYATSLNDISKAFGNW FT WLLNSLEKDQINIFDVIAMMERESILDLDINDKKKVKLSLDNLYKLNSIINRTGAGLEI FT FIDRWRKTSFRLMTYKSLTASSLSDIPFSILSFDENGKL" XX SQ Sequence 2639 BP; 748 A; 481 C; 510 G; 899 T; 1 other; ctttttttgt tttttttttc ttttctttgg ggtaatgact cttcaagtca cttgacagtc 60 ataatgccta aaccccagtc agtctctctt gccttcacag gtgaggtgtg ctttcggcta 120 taatggtact ttccattcgg acagtagacg agtgtaatga gataacatca aaattcgaat 180 tgcacgggct agcgacccaa cgtaatagta aatcactcca aactgtatcg tgaaacattt 240 gcattaatta attaacacaa agctacaaca acacattcaa aattatactc taaacttaat 300 gcaaaattga gtctaataag aagtaactat ttttctttgt tacttttatt aaaatcattc 360 ttcatcaagc ctaaaagtgt taatgtcaaa cgtgatggta agagctggat ctcccaaaag 420 gagattccaa aatttatcat catggtttgt tggtgtaccg gtacacagtc ctatcaaaga 480 tcttttatga agatgcagga tagatttgtc tttatctgaa atactgctgg ctctacattc 540 ctctttaagt atcttaaaga ggtaatgcgt cttacagtaa gaagattggc gaatatagac 600 cttattccta gtaaagaaaa tctttgttaa attaaacaaa tatagatttc ctgctattat 660 tcctctagag atttgcaagg atctttcctg gtttccaggg agattccatg ttttgtctcg 720 aaaggtaata gctctcctta ccgttatttc gattttcagg gttttaccta ctaaggtatt 780 gcctgattac acgactatca gtaagcccca ttcgggactt attgaaacgt gttcatcaga 840 gtcaattgct ttagcctgta aaaatcttga gatcaaaaga gttgataagg tgatgaagct 900 aagattgaaa ggttctctaa aagccggacc gaatggtaaa atatcattac ttacttcgtt 960 attagatgct ctggcttttt ggtcagatcc tttaagggta atccacttca tctgatttaa 1020 tatcaggtgt tatggttact tttggggact aatatgaagt atgtgattga tttttatcat 1080 gatcatttcc ttaccgtatt accttatagc attgtgtctt ggtgcgagag ccccagtaat 1140 gggtcaattg gcaactgttt atgatcaagc tggaaaagcg agaattgtag cttctacaaa 1200 ctcgtggatt cagtgttctc tctttggttt acacaataag attttttcta tcttacggag 1260 tattcctcaa gatggaactt ttgatcaaaa caagcctttt gatttattat tggagtctct 1320 tcagccaggg tacatgttat atggtttcga cctgagtgca gcgacagata gacttcctat 1380 tgcattccaa aaggatatcc taaatcattt agggtatccc ggaggtcctt gaagaaggtt 1440 actgggtatc aaatataatt caccttgtgg atttatttct tacgcagttg gccaaccaat 1500 gggtgcatat tcttcctttg caatgcttgc tcttacacat cacgtgttgg ttcaagtagc 1560 cgcccaaaag gcgggtttct cagaccgttt cacggactac tgtattcttg gtgacgatat 1620 cgtcatagcc aactctttag ttgctgaagc ttataagtcc ttaatctttg atttaggctt 1680 agaaatttca gaatctaaga gtgttatttc cggaacattt accgaattcg caaagaagtt 1740 gagaggtcca cttatggata tctcacctat cggagcgggt ttgatattat attccttacg 1800 taacaagtac tacatctgtg tgttggtttt tgagatcctg gaaaggggat tatgcatgtg 1860 gtatgacgtc tacccccaat tactcagctt gttacctaag atttatcgta ggtatttcaa 1920 gctttgtgat tggtttattg cgcttcactt gcgtcggaga gagcatctgg gtgaccaaga 1980 tcatgagatc ttgaatccta gaattgctta cttcaacgta ttcttaaata aagagaagat 2040 tatctcttta cttgagatta tgtgaaactc tactgtaagg gattggttcc gattatggaa 2100 ttcgattaag tatactctaa ataagggtct atttatatct caagccagag tcggtcttcc 2160 ggactgaagt gaattgatct tctttccttt gttaccctcn acttatatta tgatcatgtc 2220 ctacgcaacg tccctgaatg acatttccaa agcttttgga aattgatgac ttctcaattc 2280 tctcgagaag gaccagatta acatcttcga tgtaatcgcc atgatggaac gtgagtcaat 2340 acttgatctt gatataaatg ataagaagaa ggttaaatta tctttggata atctatataa 2400 gttaaattct ataatcaata ggactggagc agggctggaa atctttatag atcgttggcg 2460 gaaaacttca ttccgtttaa tgacctataa aagcctaaca gcttcttctc tgtccgatat 2520 accctttagc attcttagtt ttgacgagaa tggcaaattg taatagaatc taaccaacat 2580 gggatcgagg tctacacact tcagtgtgcc ttgtgtacct gagctgatgt tgcttagga 2639 //