ID AY328478; SV 1; linear; genomic RNA; STD; VRL; 2501 BP. XX AC AY328478; XX DT 02-JUL-2004 (Rel. 80, Created) DT 02-JUL-2004 (Rel. 80, Last updated, Version 1) XX DE Cryphonectria cubensis mitovirus 1c RNA-dependent RNA polymerase gene, DE complete cds. XX KW . XX OS Cryphonectria cubensis mitovirus 1c OC Viruses; Riboviria; Narnaviridae; Mitovirus. XX RN [1] RP 1-2501 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT "Molecular characterization of mitoviruses co-infecting South African RT isolates of the Eucalyptus canker pathogen Cryphonectria cubensis"; RL Unpublished. XX RN [2] RP 1-2501 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT ; RL Submitted (24-JUN-2003) to the INSDC. RL Department of Genetics, Forestry and Agricultural Biotechnology Institute, RL University of Pretoria, Pretoria, Gauteng 0001, Republic of South Africa XX DR MD5; 2e7d0d4be0ba3e4a9cc11d690dcac8e8. XX FH Key Location/Qualifiers FH FT source 1..2501 FT /organism="Cryphonectria cubensis mitovirus 1c" FT /mol_type="genomic RNA" FT /db_xref="taxon:249054" FT CDS 84..2318 FT /codon_start=1 FT /transl_table=4 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q6EH19" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q6EH19" FT /protein_id="AAR01972.1" FT /translation="MTKADHYSSASSDPPRWTDCCHNTRQHQPTFAIKWIITKTMKRNL FT NKLYIHLNLLRDIGAIKLSLVWFLHWSHLELGIASRLVSSAVARFQLLATTRGRNAAIS FT EFKASRLAFTRWLCGRPLSGKVGAPITKAGLPKVIPREARLLLLRERPLYLVKAVITVL FT SIGRYFKGGNPVKWENITKPSTPTLPKDGEILFGLEKLNIDVGQFEPTDWKFRWVVTAG FT PNGPSISSCLQDLPKFNGLFRSQVEVILPELLPIIDTLLTWEKSFKLSTLMGLAGFKDD FT SLRKIAIKDDREGKSRPFAIFDYWSQTVLSPLHDWAYATLRSIPQDCTFNQAEGLSKVT FT ARPSQKYFYSYDLEAATDRFPIQFQKKVLSLIFNTTYAQAWAEIMTQEPFRVKGLSDPL FT RWGAGQPLGAKSSWAIFTLCHHLVVHIAAVRTNSDPYYVILGDDIVLRGSRLATVYKRI FT MSELGVSISETKSHVSKDTFEFAKMWMHQGRNASGFPVVGLAETLRKPLEMAALFVFEL FT PAKGYPVTITPRTVSQYFLLVARYNTIPPRLAVWTADKVVWYYSFLSWLATRDDGWAKY FT IAQSASLLVSPNTAHDLLMKAVRDKWAKQLDKSLMDFQDFGFDMFDKVKTLPPFKPTWD FT PEAWPGRLSASGIEFNPAPRKVPIFAALQEEGEIKYSDYLQQKLEMTDDQLTFEEIESL FT KLPPRPQLKGFLPKRTREYVRTLNLISHGLNRDLRAQCIGTRPDVYNMKD" XX SQ Sequence 2501 BP; 685 A; 612 C; 591 G; 613 T; 0 other; cttttccttt ttcttttttt ttttatccgt tccgtgtcca ctagctgctg actgttactg 60 actagccttg taacaacaaa gggataacca aagctgacca ctactcaagt gcgagcagcg 120 acccgccaag gtgaaccgat tgctgtcata atactaggca gcaccagccc acgtttgcta 180 taaaatgaat tataacaaaa accatgaaaa gaaatctcaa taaactctat atacacctaa 240 atctcttacg agacatcggt gcaataaaat tgagtctagt gtgattcctt cactgatccc 300 accttgagct aggtatagcg tcacgtctcg tctcttccgc ggtagccaga tttcaacttc 360 tggccaccac gagagggcgg aacgccgcta tatccgagtt taaggcgtcg cggctagcgt 420 ttacacgatg actctgtggg cggccgctct caggtaaagt tggtgccccg ataacaaaag 480 ctgggcttcc taaggtaatc cctagggagg ccagactttt gttgcttcgg gaacgccctc 540 tttacttggt aaaggccgtc ataacggtgc tatcgatcgg gcgttatttt aagggtggaa 600 accctgtaaa gtgggagaat attacgaagc cgtcaactcc taccctccca aaagatggag 660 aaatcctctt tgggttggag aagttgaaca ttgacgtcgg gcagttcgag ccaacggatt 720 ggaaattccg ttgagtcgtg acagccgggc caaatgggcc aagtatatct tcctgcttac 780 aggacctccc gaaatttaac ggtctcttca ggtcccaggt agaagtcatt ctacctgagc 840 tccttcccat cattgatacc ctattgacct gggagaaaag ctttaagctg tcaaccctta 900 tgggattggc aggctttaaa gacgattccc tccggaaaat agctatcaag gatgataggg 960 agggtaagag tagacctttt gcgatattcg attactgatc ccagacagtt ttatcacctc 1020 tgcatgactg agcgtacgcg accctgaggt caattcctca ggattgcacg ttcaaccagg 1080 cagagggact gtcgaaggtc acagctcggc catcgcaaaa gtatttctat tcttacgacc 1140 ttgaagcggc aacagaccgt tttccgatac aatttcagaa aaaggttctg tccctgatct 1200 ttaacactac ttatgcccag gcgtgagctg agataatgac tcaagagcct tttagagtca 1260 agggattgtc cgacccctta agatgaggag ccgggcagcc tcttggagct aaaagttcct 1320 gagccatttt cacattatgc caccacctag tagttcatat agcagcggta cggactaact 1380 ccgaccccta ctacgtgata ctaggcgatg acatagtgct ccgtggctca cggctggcga 1440 cagtgtacaa acggataatg tccgaacttg gagtatccat atccgaaacg aaatcgcacg 1500 tgtcaaaaga cacgttcgaa ttcgctaaga tgtgaatgca ccaaggtagg aacgcgagtg 1560 ggttccctgt agtgggacta gctgagacac tcagaaagcc actagaaatg gcggctctct 1620 ttgtgtttga gctccctgct aaagggtatc cagtcactat tactccgcgc accgtgtcgc 1680 agtacttcct tctagtagca cgttataata ccattccacc tcgtctggcg gtatgaactg 1740 ccgacaaagt ggtatggtac tatagtttct tgtcatgact ggccacccgg gatgacggat 1800 gggcgaaata tatcgcccag tcggcctccc tattggtgag ccccaatacc gcccacgacc 1860 tccttatgaa ggccgtgaga gataaatggg ctaaacagct tgacaagtct ctaatggatt 1920 tccaggattt tggatttgat atgttcgaca aagtgaagac cttgccgcca ttcaagccta 1980 cctgggatcc agaagcgtga cctggtcggt tgtctgcgag tggaatcgaa ttcaatccag 2040 cccctaggaa ggtaccaata tttgctgctc tccaagaaga aggagagatc aagtattccg 2100 attatctcca acagaagttg gagatgaccg acgatcagct gacgttcgag gagatagaat 2160 ctttgaaact acctcctcgt ccgcaactga aagggttcct tccgaaaagg actagagagt 2220 atgttcgtac acttaaccta attagtcacg gcttaaaccg ggatctaagg gctcagtgca 2280 taggaaccag accagacgta tacaatatga aagactaaga ggttctccct cccaccttga 2340 gaaagtggtg aaagctctcc ttagccccta cacattgtgt acccccattc ccctttcggg 2400 gtaggcagaa gtcaactgct tgctccggca gggatgccgg atgggaagtc gacagcgctg 2460 gggcaaaaaa aaaaaaaaaa aaaagaaaaa aaaaagaaaa a 2501 //