ID AY328477; SV 1; linear; genomic RNA; STD; VRL; 2601 BP. XX AC AY328477; XX DT 02-JUL-2004 (Rel. 80, Created) DT 02-JUL-2004 (Rel. 80, Last updated, Version 1) XX DE Cryphonectria cubensis mitovirus 1b RNA-dependent RNA polymerase gene, DE complete cds. XX KW . XX OS Cryphonectria cubensis mitovirus 1b OC Viruses; Riboviria; Narnaviridae; Mitovirus. XX RN [1] RP 1-2601 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT "Molecular characterization of mitoviruses co-infecting South African RT isolates of the Eucalyptus canker pathogen Cryphonectria cubensis"; RL Unpublished. XX RN [2] RP 1-2601 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT ; RL Submitted (24-JUN-2003) to the INSDC. RL Department of Genetics, Forestry and Agricultural Biotechnology Institute, RL University of Pretoria, Pretoria, Gauteng 0001, Republic of South Africa XX DR MD5; 0fa937dc11c0f6cec6f76778fa5e99e5. XX FH Key Location/Qualifiers FH FT source 1..2601 FT /organism="Cryphonectria cubensis mitovirus 1b" FT /mol_type="genomic RNA" FT /db_xref="taxon:249053" FT CDS 184..2418 FT /codon_start=1 FT /transl_table=4 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q6EH20" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q6EH20" FT /protein_id="AAR01971.1" FT /translation="MTKADHYSSASSDPPRWTDCCHNTRQHQPTFAIKWIITKTMKRNL FT NKLYIHLNLLRDIGAIKLSLVWFLHWSHLELGIASRLVSSAVARFQLLATTRGRNAAIS FT EFKASRLAFTRWLCGRPLSGKVGAPITKAGLPKVIPREARLLLLRERPLYLVKAVITVL FT SIGRYFKGGNPVKWENITKPSTPTLPKDGEILFGLEKLNIDVGQFEPTDWKFRWVVTAG FT PNGPSISSCLQDLPKFNGLFRSQVEVILPELLPIIDTLLTWEKSFKLSTLMGLAGFKDD FT SLRKIAIKDDREGKSRPFAIFDYWSQTVLSPLHDWAYATLRSIPQDCTFNQAEGLSKVT FT ARPSQKYFYSYDLEAATDRFPIQFQKKVLSLIFNTTYAQAWAEIMTQEPFRVKGLSDPL FT RWGAGQPLGAKSSWAIFTLCHHLVVHIAAVRTNSDPYYVILGDDIVLRGSRLATVYKRI FT MSELGVSISETKSHVSKDTFEFAKMWMHQGRNASGFPVVGLAETLRKPLEMAALFVFEL FT PAKGYPVTITPRTVSQYFLLVARYNTIPPRLAVWTADKVVWYYSFLSWLATRDDGWAKY FT IAQSASLLVSPNTAHDLLMKAVRDKWAKQLDKSLMDFQDFGFDMFDKVKTLPPFKPTWD FT PEAWPGRLSASGIEFNPAPRKVPIFAALQEEGEIKYSDYLQQKLEMTDDQLTFEEIESL FT KLPPRPQLKGFLPKRTREYVRTLNLISHGLNRDLRAQCIGTRPDVYNMKD" XX SQ Sequence 2601 BP; 701 A; 639 C; 614 G; 647 T; 0 other; cttttttttt ttttttttct ttcttctttt tttttttttt cttttttttc cccccttgcc 60 ccggtttccc ggggaaggca acggagaagg ggtgacagga cccgaaaggc cccacttgtc 120 aatcatccgt tccgtgtcca ctagctgctg actgttactg actagccttg taacaacaaa 180 gggataacca aagctgacca ctactcaagt gcgagcagcg acccgccaag gtgaaccgat 240 tgctgtcata atactaggca gcaccagccc acgtttgcta taaaatgaat tataacaaaa 300 accatgaaaa gaaatctcaa taaactctat atacacctaa atctcttacg agacatcggt 360 gcaataaaat tgagtctagt gtgattcctt cactgatccc accttgagct aggtatagcg 420 tcacgtctcg tctcttccgc ggtagccaga tttcaacttc tggccaccac gagagggcgg 480 aacgccgcta tatccgagtt taaggcgtcg cggctagcgt ttacacgatg actctgtggg 540 cggccgctct caggtaaagt tggtgccccg ataacaaaag ctgggcttcc taaggtaatc 600 cctagggagg ccagactttt gttgcttcgg gaacgccctc tttacttggt aaaggccgtc 660 ataacggtgc tatcgatcgg gcgttatttt aagggtggaa accctgtaaa gtgggagaat 720 attacgaagc cgtcaactcc taccctccca aaagatggag aaatcctctt tgggttggag 780 aagttgaaca ttgacgtcgg gcagttcgag ccaacggatt ggaaattccg ttgagtcgtg 840 acagccgggc caaatgggcc aagtatatct tcctgcttac aggacctccc gaaatttaac 900 ggtctcttca ggtcccaggt agaagtcatt ctacctgagc tccttcccat cattgatacc 960 ctattgacct gggagaaaag ctttaagctg tcaaccctta tgggattggc aggctttaaa 1020 gacgattccc tccggaaaat agctatcaag gatgataggg agggtaagag tagacctttt 1080 gcgatattcg attactgatc ccagacagtt ttatcacctc tgcatgactg agcgtacgcg 1140 accctgaggt caattcctca ggattgcacg ttcaaccagg cagagggact gtcgaaggtc 1200 acagctcggc catcgcaaaa gtatttctat tcttacgacc ttgaagcggc aacagaccgt 1260 tttccgatac aatttcagaa aaaggttctg tccctgatct ttaacactac ttatgcccag 1320 gcgtgagctg agataatgac tcaagagcct tttagagtca agggattgtc cgacccctta 1380 agatgaggag ccgggcagcc tcttggagct aaaagttcct gagccatttt cacattatgc 1440 caccacctag tagttcatat agcagcggta cggactaact ccgaccccta ctacgtgata 1500 ctaggcgatg acatagtgct ccgtggctca cggctggcga cagtgtacaa acggataatg 1560 tccgaacttg gagtatccat atccgaaacg aaatcgcacg tgtcaaaaga cacgttcgaa 1620 ttcgctaaga tgtgaatgca ccaaggtagg aacgcgagtg ggttccctgt agtgggacta 1680 gctgagacac tcagaaagcc actagaaatg gcggctctct ttgtgtttga gctccctgct 1740 aaagggtatc cagtcactat tactccgcgc accgtgtcgc agtacttcct tctagtagca 1800 cgttataata ccattccacc tcgtctggcg gtatgaactg ccgacaaagt ggtatggtac 1860 tatagtttct tgtcatgact ggccacccgg gatgacggat gggcgaaata tatcgcccag 1920 tcggcctccc tattggtgag ccccaatacc gcccacgacc tccttatgaa ggccgtgaga 1980 gataaatggg ctaaacagct tgacaagtct ctaatggatt tccaggattt tggatttgat 2040 atgttcgaca aagtgaagac cttgccgcca ttcaagccta cctgggatcc agaagcgtga 2100 cctggtcggt tgtctgcgag tggaatcgaa ttcaatccag cccctaggaa ggtaccaata 2160 tttgctgctc tccaagaaga aggagagatc aagtattccg attatctcca acagaagttg 2220 gagatgaccg acgatcagct gacgttcgag gagatagaat ctttgaaact acctcctcgt 2280 ccgcaactga aagggttcct tccgaaaagg actagagagt atgttcgtac acttaaccta 2340 attagtcacg gcttaaaccg ggatctaagg gctcagtgca taggaaccag accagacgta 2400 tacaatatga aagactaaga ggttctccct cccaccttga gaaagtggtg aaagctctcc 2460 ttagccccta cacattgtgt acccccattc ccctttcggg gtaggcagaa gtcaactgct 2520 tgctccggca gggatgccgg atgggaagtc gacagcgctg gggcaaaaaa aaaaaaaaaa 2580 aaaagaaaaa aaaaagaaaa a 2601 //