ID AY328476; SV 1; linear; genomic RNA; STD; VRL; 2555 BP. XX AC AY328476; XX DT 02-JUL-2004 (Rel. 80, Created) DT 02-JUL-2004 (Rel. 80, Last updated, Version 1) XX DE Cryphonectria cubensis mitovirus 1a RNA-dependent RNA polymerase gene, DE complete cds. XX KW . XX OS Cryphonectria cubensis mitovirus 1a OC Viruses; Riboviria; Narnaviridae; Mitovirus. XX RN [1] RP 1-2555 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT "Molecular characterization of mitoviruses co-infecting South African RT isolates of the Eucalyptus canker pathogen Cryphonectria cubensis"; RL Unpublished. XX RN [2] RP 1-2555 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT ; RL Submitted (24-JUN-2003) to the INSDC. RL Department of Genetics, Forestry and Agricultural Biotechnology Institute, RL University of Pretoria, Pretoria, Gauteng 0001, Republic of South Africa XX DR MD5; 1ffbc6077e7e784c31783d54f8940803. XX FH Key Location/Qualifiers FH FT source 1..2555 FT /organism="Cryphonectria cubensis mitovirus 1a" FT /mol_type="genomic RNA" FT /db_xref="taxon:249052" FT CDS 138..2372 FT /codon_start=1 FT /transl_table=4 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q6EH21" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q6EH21" FT /protein_id="AAR01970.1" FT /translation="MTKADHYSSASSDPPRWTDCCHNTRQHQPTFAIKWIITKTMKRNL FT NKLYIHLNLLRDIGAIKLSLVWFLHWSHLELGIASRLVSSAVARFQLLATTRGRNAAIS FT EFKASRLAFTRWLCGRPLSGKVGAPITKAGLPKVIPREARLLLLRERPLYLVKAVITVL FT SIGRYFKGGNPVKWENITKPSTPTLPKDGEILFGLEKLNIDVGQFEPTDWKFRWVVTAG FT PNGPSISSCLQDLPKFNGLFRSQVEVILPELLPIIDTLLTWEKSFKLSTLMGLAGFKDD FT SLRKIAIKDDREGKSRPFAIFDYWSQTVLSPLHDWAYATLRSIPQDCTFNQAEGLSKVT FT ARPSQKYFYSYDLEAATDRFPIQFQKKVLSLIFNTTYAQAWAEIMTQEPFRVKGLSDPL FT RWGAGQPLGAKSSWAIFTLCHHLVVHIAAVRTNSDPYYVILGDDIVLRGSRLATVYKRI FT MSELGVSISETKSHVSKDTFEFAKMWMHQGRNASGFPVVGLAETLRKPLEMAALFVFEL FT PAKGYPVTITPRTVSQYFLLVARYNTIPPRLAVWTADKVVWYYSFLSWLATRDDGWAKY FT IAQSASLLVSPNTAHDLLMKAVRDKWAKQLDKSLMDFQDFGFDMFDKVKTLPPFKPTWD FT PEAWPGRLSASGIEFNPAPRKVPIFAALQEEGEIKYSDYLQQKLEMTDDQLTFEEIESL FT KLPPRPQLKGFLPKRTREYVRTLNLISHGLNRDLRAQCIGTRPDVYNMKD" XX SQ Sequence 2555 BP; 702 A; 633 C; 615 G; 605 T; 0 other; cttagcccct tgccccggtt tcccggggaa ggcaacggag aaggggtgac aggacccgaa 60 aggccccact tgtcaatcat ccgttccgtg tccactagct gctgactgtt actgactagc 120 cttgtaacaa caaagggata accaaagctg accactactc aagtgcgagc agcgacccgc 180 caaggtgaac cgattgctgt cataatacta ggcagcacca gcccacgttt gctataaaat 240 gaattataac aaaaaccatg aaaagaaatc tcaataaact ctatatacac ctaaatctct 300 tacgagacat cggtgcaata aaattgagtc tagtgtgatt ccttcactga tcccaccttg 360 agctaggtat agcgtcacgt ctcgtctctt ccgcggtagc cagatttcaa cttctggcca 420 ccacgagagg gcggaacgcc gctatatccg agtttaaggc gtcgcggcta gcgtttacac 480 gatgactctg tgggcggccg ctctcaggta aagttggtgc cccgataaca aaagctgggc 540 ttcctaaggt aatccctagg gaggccagac ttttgttgct tcgggaacgc cctctttact 600 tggtaaaggc cgtcataacg gtgctatcga tcgggcgtta ttttaagggt ggaaaccctg 660 taaagtggga gaatattacg aagccgtcaa ctcctaccct cccaaaagat ggagaaatcc 720 tctttgggtt ggagaagttg aacattgacg tcgggcagtt cgagccaacg gattggaaat 780 tccgttgagt cgtgacagcc gggccaaatg ggccaagtat atcttcctgc ttacaggacc 840 tcccgaaatt taacggtctc ttcaggtccc aggtagaagt cattctacct gagctccttc 900 ccatcattga taccctattg acctgggaga aaagctttaa gctgtcaacc cttatgggat 960 tggcaggctt taaagacgat tccctccgga aaatagctat caaggatgat agggagggta 1020 agagtagacc ttttgcgata ttcgattact gatcccagac agttttatca cctctgcatg 1080 actgagcgta cgcgaccctg aggtcaattc ctcaggattg cacgttcaac caggcagagg 1140 gactgtcgaa ggtcacagct cggccatcgc aaaagtattt ctattcttac gaccttgaag 1200 cggcaacaga ccgttttccg atacaatttc agaaaaaggt tctgtccctg atctttaaca 1260 ctacttatgc ccaggcgtga gctgagataa tgactcaaga gccttttaga gtcaagggat 1320 tgtccgaccc cttaagatga ggagccgggc agcctcttgg agctaaaagt tcctgagcca 1380 ttttcacatt atgccaccac ctagtagttc atatagcagc ggtacggact aactccgacc 1440 cctactacgt gatactaggc gatgacatag tgctccgtgg ctcacggctg gcgacagtgt 1500 acaaacggat aatgtccgaa cttggagtat ccatatccga aacgaaatcg cacgtgtcaa 1560 aagacacgtt cgaattcgct aagatgtgaa tgcaccaagg taggaacgcg agtgggttcc 1620 ctgtagtggg actagctgag acactcagaa agccactaga aatggcggct ctctttgtgt 1680 ttgagctccc tgctaaaggg tatccagtca ctattactcc gcgcaccgtg tcgcagtact 1740 tccttctagt agcacgttat aataccattc cacctcgtct ggcggtatga actgccgaca 1800 aagtggtatg gtactatagt ttcttgtcat gactggccac ccgggatgac ggatgggcga 1860 aatatatcgc ccagtcggcc tccctattgg tgagccccaa taccgcccac gacctcctta 1920 tgaaggccgt gagagataaa tgggctaaac agcttgacaa gtctctaatg gatttccagg 1980 attttggatt tgatatgttc gacaaagtga agaccttgcc gccattcaag cctacctggg 2040 atccagaagc gtgacctggt cggttgtctg cgagtggaat cgaattcaat ccagccccta 2100 ggaaggtacc aatatttgct gctctccaag aagaaggaga gatcaagtat tccgattatc 2160 tccaacagaa gttggagatg accgacgatc agctgacgtt cgaggagata gaatctttga 2220 aactacctcc tcgtccgcaa ctgaaagggt tccttccgaa aaggactaga gagtatgttc 2280 gtacacttaa cctaattagt cacggcttaa accgggatct aagggctcag tgcataggaa 2340 ccagaccaga cgtatacaat atgaaagact aagaggttct ccctcccacc ttgagaaagt 2400 ggtgaaagct ctccttagcc cctacacatt gtgtaccccc attccccttt cggggtaggc 2460 agaagtcaac tgcttgctcc ggcagggatg ccggatggga agtcgacagc gctggggcaa 2520 aaaaaaaaaa aaaaaaaaga aaaaaaaaag aaaaa 2555 //