Dbfetch

Dbfetch

ID   AY309957; SV 1; linear; genomic DNA; STD; VRL; 1574 BP.
XX
AC   AY309957;
XX
DT   29-JUN-2003 (Rel. 76, Created)
DT   29-JUN-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Luffa begomovirus coat protein (AV1), AC3 (AC3), and AC2 (AC2) genes,
DE   complete cds.
XX
KW   .
XX
OS   Luffa yellow mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1574
RA   Sohrab S.S., Mandal B., Varma A.;
RT   "Association of a Begomovirus with yellow mosaic disease of Luffa
RT   cylindrica";
RL   Unpublished.
XX
RN   [2]
RP   1-1574
RA   Sohrab S.S., Mandal B., Varma A.;
RT   ;
RL   Submitted (30-MAY-2003) to the INSDC.
RL   Plant Pathology, Indian Agricultural Research Institute, New Delhi, Delhi
RL   110012, India
XX
DR   MD5; 95e0c55e3c30b8e91a65beb81f525596.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1574
FT                   /organism="Luffa yellow mosaic virus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:207240"
FT   gene            156..926
FT                   /gene="AV1"
FT   CDS             156..926
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q7TDA4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TDA4"
FT                   /protein_id="AAP74756.1"
FT                   /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT
FT                   NRPMNRKPRMYRMYKSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGNIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLRKWHATVTGGTYASKEQALVRKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   gene            complement(923..1333)
FT                   /gene="AC3"
FT   CDS             complement(923..1333)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="AC3"
FT                   /db_xref="GOA:Q7TDA3"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TDA3"
FT                   /protein_id="AAP74757.1"
FT                   /translation="MITDSRTGEYITADRAESGVYTWEIRNPLYFKILKHDSRPFLTQH
FT                   DIIKIQIQFNHNLRKALGLHKCFLTFKIWTGLRPQIGIFLRVFKTQVLKYLDMLGVIGI
FT                   YNVIRAVYHVLDNVLERTIDVWPSYDIKLDIY"
FT   gene            complement(1053..1472)
FT                   /gene="AC2"
FT   CDS             complement(1053..1472)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="AC2"
FT                   /db_xref="GOA:Q7TDA2"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TDA2"
FT                   /protein_id="AAP74758.1"
FT                   /translation="MQSSSHSKNHSIPVARTSLPQKKKKSIRRRRVDLPCGCSYYISIN
FT                   CHDHGFTHRGIHHCGSSREWRIYLGNSKSPVFQNFETRQQALPNPARHNQDSNTVQPQP
FT                   AESPGTSQVFSNFQNLDGLTPSDWDFLESLQNPGP"
XX
SQ   Sequence 1574 BP; 440 A; 336 C; 357 G; 441 T; 0 other;
     ggatccatta ttgcacgaat ttccagaaag cgttcatggt ctaaggtgca tgctagctgt        60
     aaaatatctc caagagatag aaaagaacta ttcaccagac acagtcggct acgatcttat       120
     tcgagatctc attcttgttc tccgagcaaa gaactatggc gaagcgacca gcagatatca       180
     tcatttcaac gcccgcatcg aaggtacgcc gacgtctcaa cttcgacagc ccctatggag       240
     ctcgtgcagt tgtccccatt gcccgcgtca caaaagcaaa ggcctggacc aacaggccga       300
     tgaacagaaa acccagaatg tacagaatgt ataaaagtcc cgacgtgcca aggggctgtg       360
     aaggcccttg taaagtgcag tcctttgaat ctaggcacga tgtctctcat attggcaaag       420
     tcatgtgtgt tagtgatgtt acccgaggaa ctggactcac acatcgcgta gggaagcgat       480
     tctgtgtgaa atccgtctat gtgctgggaa atatatggat ggatgaaaac atcaagacaa       540
     aaaaccatac taacagtgtc atgttttttc tggttcgtga ccgtcgtcct acaggatctc       600
     cccaggattt tggggaagtg tttaatatgt ttgacaatga accgagcaca gcaacggtga       660
     agaacatgca tcgtgatcgt tatcaagtct tacggaagtg gcatgcgact gtgacgggag       720
     gaacatatgc atctaaggag caagcattag ttaggaagtt tgttagggtt aataattatg       780
     ttgtttataa tcaacaagag gccggcaagt atgagaatca tactgaaaac gcattaatgt       840
     tgtatatggc ctgtactcac gcgtcaaatc ctgtatatgc tactttgaaa atccggatct       900
     acttttatga ttcggtcaca aattaataaa tatccagttt tatatcatac gaaggccata       960
     catcaattgt tcgctccaat acattatcca atacatgata aactgctctt attacattat      1020
     aaattcctat gacacctaac atatccaggt acttaaggac ctgggttttg aagactctca      1080
     agaaaatccc aatctgaggg cgtaagcccg tccagatttt gaaagttaga aaacacttgt      1140
     gaagtcccag ggctttccgc aggttgtggt tgaactgtat ttgaatcttg attatgtcgt      1200
     gctgggttag gaagggcctg ctgtcgtgtt tcaaaatttt gaaatacagg ggatttcgaa      1260
     tttcccaggt atatacgcca ctctctgctc gatccgcagt gatgtattcc cctgtgcgtg      1320
     aatccgtgat catggcagtt gatcgatatg taatacgaac aaccacacgg cagatcaact      1380
     cgcctcctgc gaatgctctt cttcttcttc tgggggagcg atgttctcgc gaccggaata      1440
     gagtggttct tcgagtgtga tgaagactgc attcttgatt gcccactgct tcagtgctgc      1500
     atttttttct tcgtccagat attccttata gctgctgttt ggacctttat tgcacaggaa      1560
     gataggggga attc                                                        1574
//