ID AY286316; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC AY286316; XX DT 21-MAY-2003 (Rel. 75, Created) DT 16-NOV-2006 (Rel. 89, Last updated, Version 3) XX DE Tomato leaf curl New Delhi virus - [Potato] isolate Pot-Mer1-2002 segment DE DNA A, complete sequence. XX KW . XX OS Tomato leaf curl New Delhi virus - [Potato] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Usharani K.S., Surendranath B., Garg I.D., Khurana S.M.P., Malathi V.G.; RT "Complete nucleotide sequence of DNA A of potato apical leaf curl virus RT from India"; RL Unpublished. XX RN [2] RP 1-2740 RA Usharani K.S., Surendranath B., Garg I.D., Khurana S.M.P., Malathi V.G.; RT ; RL Submitted (28-APR-2003) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, PUSA RL Campus, New Delhi, Delhi 110012, India XX DR MD5; 006fc55699dacbd65aeabe06d341db41. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl New Delhi virus - [Potato]" FT /segment="DNA A" FT /isolate="Pot-Mer1-2002" FT /mol_type="genomic DNA" FT /country="India" FT /note="transmitted by whitefly" FT /db_xref="taxon:270145" FT gene 120..458 FT /gene="AV2" FT CDS 120..458 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:Q7TLA4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q7TLA4" FT /protein_id="AAP37405.1" FT /translation="MWDPLLHEFPESVHGVRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHLFNARIESTPTSQLRQPLWSSCSCPHCPRHKSKGLDQQADEQ FT KTQNIQNV" FT gene 280..1050 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:Q7TLA3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q7TLA3" FT /protein_id="AAP37406.1" FT /translation="MVKRPADIIFSTPASKVRRRLNFDSPFGARAVVPIARVTKAKAWT FT NRPMNRKPRIYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGSGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASKEQALVSKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(310..795) FT /gene="AC5" FT CDS complement(310..795) FT /codon_start=1 FT /gene="AC5" FT /product="AC5" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:Q7TLA2" FT /protein_id="AAP37407.1" FT /translation="MHVLHRCCARFIVKHVKNFPKILWRSCRTTVTDQKKHDTVSMVFC FT LDVFIHPYLPQHIDRFHTKSLPYAMSESRTSGNITNTHDFANMRDIVPRFKGLHLTRTF FT ASPWHVGTSIHSVYSGFSVHRPVGPGLCFCDAGNGDNCTSSKGAVEVETSAYFRCGR" FT gene complement(1047..1457) FT /gene="AC3" FT CDS complement(1047..1457) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /note="replication enhancer protein" FT /db_xref="GOA:Q7TLA1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q7TLA1" FT /protein_id="AAP37408.1" FT /translation="MITDSRTGESITADRAESGVYTWEIRNPLYFKILKHNSRPFLRQH FT DIINIQIQFNHNLRKALGLHKCFLTFKIWTGLRPQIGIFLRVFKTQVLRYLDMVGVIGI FT YNVIRAVYHVLDNVMEQTIDVCTSYDIKLDIY" FT gene complement(1177..1596) FT /gene="AC2" FT CDS complement(1177..1596) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /note="transcription activator protein" FT /db_xref="GOA:Q7TLA0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q7TLA0" FT /protein_id="AAP37409.1" FT /translation="MQSLSHSKNHSIPVAKTSLPQKKKKSIRRRRVDLQCGCTYYISIN FT CHDHGFTHRGVHHCGSSREWRIYLGNSKSPVFQNFETQQQTLPKTARHHQYSNTIQPQP FT AESPGTSQVFSNFQNLDGLTPSDWDFLESLQNTGP" FT gene complement(1499..2584) FT /gene="AC1" FT CDS complement(1499..2584) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /note="replication initiator protein" FT /db_xref="GOA:Q7TL99" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q7TL99" FT /protein_id="AAP37410.1" FT /translation="MSPPRRFRINAKNYFLTYPKCSLTKEDALSQLQTLETPTAKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKKYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKDDALKVLKELAPKDYVLQFH FT NLNTNLDRIFQPPSEIYVSPFSISSFDRVPPELVDWVSSNVVCAAARPFRPISIVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNTSYKEYLDEEKNAALKHWAIKNAVFITLEEPL FT YSGRENIAPTEEEEEHSQEAS" FT gene complement(2251..2427) FT /gene="AC4" FT CDS complement(2251..2427) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q7TL98" FT /protein_id="AAP37411.1" FT /translation="MGLRISMFSSNSKGNSSAKITDSSTWFPQVGQHISIRTFRELNQH FT QTSKSISTKTETF" XX SQ Sequence 2740 BP; 745 A; 573 C; 607 G; 815 T; 0 other; accgaatggc cgcgcaaatt tttaggtggg ccctcaacca ataaaattcg agctacatgg 60 cttctttgct gtgcggggac caataaatag acttactcac taagtttgga tccacaaata 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtgtcagg tgcatgctag 180 ctgtaaaata tctccaagag atagaaaaga actattcccc agacacagtc ggatacgatc 240 ttgtccgaga tctaattctt gttcttcgag caaagaacta tggtgaagcg accagcagat 300 atcatctttt caacgcccgc atcgaaagta cgccgacgtc tcaacttcga cagccccttt 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gaccaacagg 420 ccgatgaaca gaaaacccag aatatacaga atgtatagaa gtcccgacgt gccaagggga 480 tgcgaaggtc cttgtaaggt gcagtccttt gaatctaggc acgatgtctc tcatattggc 540 aaagtcatgt gtgttagtga tgttacccga ggttctggac tcactcatcg cgtagggaag 600 cgattttgtg tgaaatctgt ctatgtgctg gggaagatat ggatggatga aaacatcaag 660 acaaaaaacc atactaacag tgtcatgttt tttttggtcc gtgaccgtcg tcctacagga 720 tctccacaag attttgggga agtttttaac atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtcttacgga agtggcatgc tactgtgacg 840 ggaggaacat atgcatctaa ggagcaagca ttagttagca agtttgttag ggttaataat 900 tatgttgtgt ataaccaaca agaggccggc aagtatgaga atcatactga aaacgcatta 960 atgttgtata tggcctgtac tcatgcatca aatcctgtgt atgctacttt gaaaatccgg 1020 atctatttct atgattcggt aacaaattaa taaatatcga gttttatatc atatgaagta 1080 catacatcaa tcgtttgttc cattacatta tccaatacat gataaactgc tcttattaca 1140 ttataaattc ctattacacc aaccatatcc aggtacctaa ggacctgtgt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaatt gtatttgaat attgatgatg 1320 tcgtgctgtc ttaggaaggg tctgctgttg tgtttcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatatac gccactctct gctcgatccg cagtgatgga ctcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatgtaatac gtacacccac actgcagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctgtggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttcttcgagt gtgataaaga ctgcattctt gattgcccag tgcttcagtg 1620 ctgcgttttt ttcttcgtcc agatattcct tatagctggt gtttggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgactggctt tccgtatttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaagtgctt tagataatgt ggatcaacgt 1800 catcaatgac gttgtaccag gcctcattgc tatagacctt tgggctcaga tcaagatgtc 1860 cacacaagta attgtggggt cctaaacaac gagcccacat tgttttgccc gttctactat 1920 ccccctctat gactatgctt atgggcctaa aaggccgcgc agcggcacac accacatttg 1980 acgagaccca atcgacgagt tctggcggaa ctctgtcgaa ggatgaaatt gaaaatggag 2040 aaacataaat ctcagaagga ggttgaaaaa tgcgatctaa attggtattt aaattgtgaa 2100 actgcagaac ataatccttt ggggctaatt cctttaatac tttcaacgca tcgtctttat 2160 ttcccgtgtt aatcgcctga gcatatgcat cgtttgccgt ttgttgacca ccacgagcag 2220 atcgtccatc gatctggaaa acaccccatt ctagaacgtc tccgtctttg tcgatatact 2280 ttttgacgtc tgatgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggaaac caagtcgaag aatctgttat ttttgcactg gaatttccct tcgaattgga 2400 tgagaacatg gatatgcgga gacccatcct cgtgaagctc tctacatatc ttgatgaatt 2460 ttttcgcagt tggggtttct agggtttgca gttgggaaag tgcgtcctcc ttagttagag 2520 agcactttgg atatgtgagg aaatagtttt tggcatttat tctaaaacga cgtggcggag 2580 acataaaact tgtcgttttg attcggcgtc cctcaacttc ttctatgtaa ttggtgtctg 2640 gagtccttta tataggtaag acaccatatg gcagaattgt aattttgaaa agaaaattac 2700 tttaattcaa attccctaaa gcggccattc gtttaatatt 2740 //