ID AY260757; SV 1; linear; genomic RNA; STD; VRL; 2252 BP. XX AC AY260757; XX DT 02-JUL-2004 (Rel. 80, Created) DT 02-JUL-2004 (Rel. 80, Last updated, Version 1) XX DE Ceratocystis polonica partitivirus putative capsid protein (CP) gene, DE complete cds. XX KW . XX OS Ceratocystis polonica partitivirus OC Viruses; Riboviria; Partitiviridae; Betapartitivirus. XX RN [1] RP 1-2252 RA Marin M., Preisig O., Wingfield B.D., Kirisits T., Wingfield M.J.; RT "Ceratocystis polonica partitivirus infects other species in the RT Ceratocystis coerulescens complex"; RL Unpublished. XX RN [2] RP 1-2252 RA Marin M., Preisig O., Wingfield B.D., Kirisits T., Wingfield M.J.; RT ; RL Submitted (23-MAR-2003) to the INSDC. RL Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology RL Institute (FABI), University of Pretoria, Pretoria, Gauteng 0002, South RL Africa XX DR MD5; 2c24c96592401eedd386a4006225f05a. XX CC CpPV from C.polonica isolate CMW2284. XX FH Key Location/Qualifiers FH FT source 1..2252 FT /organism="Ceratocystis polonica partitivirus" FT /isolate="CMW2284" FT /mol_type="genomic RNA" FT /db_xref="taxon:235434" FT gene 94..2079 FT /gene="CP" FT CDS 94..2079 FT /codon_start=1 FT /gene="CP" FT /product="putative capsid protein" FT /db_xref="UniProtKB/TrEMBL:Q6EM34" FT /protein_id="AAP86640.1" FT /translation="MSHDARDLQSEARQEARPSGLQPEAASHAPTGHNDPVARTTSSSS FT AGPGLTAPHAGTRSLGLPSKGEASHSIEASSLARDIDLGRNCSRSSGERPFLIQVVPDT FT RFACYVFTEYVQQNYSKFDVESSSMVSPATVVGYLMYCLHAFIFLTDVYSSSTMSVYAE FT EIDASHIMRKLIDIFSNCFVPDIVFSVLDALYPHKLDVRTTVSLFPSYGSVLFEYDAPR FT LIPPSIFLLAHNQLLTQTKVPNSYKSWLMQTCLVYDTDEYRVGNIIGGIYQTLSGHTTE FT TFQYKTWLLRSLSRLADSATHRTHLKRNAVTEIQFDPPHFNDGDFNPYTYLLMLSPSSR FT TTTTSFLTSLSSSCQKYLNATRSLSSVLATRSGSITRHMIFDLTAPTANSNLLKDLDES FT SVLKPGNFANFCKAADFCPPQISHPPKIMTLPYPPGVETHPSLYLVSEKESESPLKPIL FT PSYEDHVEGQILLFDPYDDEPSAHFSTLISGKLIENGNVDGITIFLPSPSSSISAVNSR FT NLQGAIPLCRIQPTFAGCSFQQFPRSHAPSNRMFTMSILYDAANIWLPYFNRTMYSALP FT ILPYMANRNANGLIPSTNLVVTSSKTVSSSSITYDVSLWSSYRYQPTNERPTPQNVYMY FT ATLEPFFGSRSSYLQSYQLQVLLPIS" XX SQ Sequence 2252 BP; 537 A; 662 C; 347 G; 706 T; 0 other; agacattcca ttacacgatt gcttatacat caccaaacgt acaaccttgt aactctgctc 60 ttttctcttc ttttcttcat attttaaata aatatgtcac acgatgcccg cgacctccaa 120 tctgaagctc gacaagaagc ccgcccctcc ggcctccagc cagaagccgc ttcccacgct 180 cccactggtc acaacgaccc cgtcgctcgc accacctcca gctcctccgc tggcccaggc 240 ctcaccgctc ctcacgcagg aacccgatct ctcggattac ctagcaaggg tgaagcctcc 300 cactcaatcg aagcgtccag cctcgcccga gatatcgatc ttggccgaaa ctgctcccgc 360 tcctctggtg aaagaccatt cttaattcaa gtcgttcctg acacccggtt cgcttgctat 420 gtcttcaccg aatacgttca gcaaaactac tccaagtttg atgttgaatc ttcttctatg 480 gtatctcccg ctactgttgt tggatatttg atgtactgct tgcacgcctt tattttctta 540 actgacgtat attcttcttc aacgatgtca gtctatgctg aagaaattga tgcatcgcat 600 attatgcgta agctcatcga tatcttctca aactgcttcg tcccagacat tgtattctcc 660 gttctcgatg ctctctaccc ccataagctc gacgttcgta caactgtctc ccttttccct 720 tcgtacggat ccgttctctt tgagtatgac gctcctagac tcattcctcc gtcgatattt 780 ctcctggctc ataaccagct gctgacgcag accaaagttc caaactcgta caaatcatgg 840 ttaatgcaaa cttgcttagt ctatgatact gacgaatacc gtgttggaaa cataattggt 900 ggaatctatc aaacgttatc tggtcacacg actgaaacgt tccagtacaa aacctggctg 960 cttagatccc tttctcgtct cgctgactct gccacccacc ggactcatct taaacgcaat 1020 gctgttactg agattcaatt tgatccccct catttcaatg acggagattt taatccatat 1080 acttatttgc taatgctgtc cccttcctct cgcactacga ctacttcatt cctgacatct 1140 ctatcttcct cttgtcagaa gtatcttaat gctactcgtt ccttgtcttc tgtcttggcc 1200 actcgctctg gatccatcac ccggcatatg atctttgatc ttactgctcc cactgcgaac 1260 tctaacttgt tgaaagatct cgacgaatca tcagttctta aacctggaaa tttcgcaaat 1320 ttctgtaaag ctgctgactt ctgtccaccc caaatttcac atccccccaa gataatgact 1380 cttccttacc ctcctggtgt tgaaactcac ccgtctctct acctcgtttc tgaaaaggaa 1440 tctgaatcgc ccctcaaacc cattcttcca tcatacgaag accatgttga aggccagatt 1500 cttctttttg atccttatga cgatgagcct tcagcccatt tctctacgct gatttctgga 1560 aagctaatcg aaaatggaaa cgtcgatggt atcaccatct tcctcccttc tccctctagc 1620 tccatttctg ctgttaactc gcgcaacctc caaggcgcaa ttccactctg tcgaatacaa 1680 ccaaccttcg caggatgtag ttttcagcaa ttccctagat ctcacgctcc ttccaaccgc 1740 atgtttacca tgtcgattct ttatgatgcc gccaatattt ggctgccgta ttttaatcgt 1800 actatgtact ctgcacttcc gatcctgccc tacatggcta accgcaacgc taatggactt 1860 atcccttcca ctaacctagt agttacgtcg agtaagacag tttcatcttc ttccatcacc 1920 tatgatgtgt ctctttggtc atcgtaccgc taccaaccca caaatgagcg tcctacgcct 1980 caaaatgtgt acatgtacgc gactcttgag cccttctttg gttctagaag ctcctactta 2040 cagtcctacc agctgcaagt tcttctcccc atcagttagt cttttctgat gatttttact 2100 gtctttgtct ttttttttta tttcattatt atgacgtttt tcagttttta ttcttaaaat 2160 tatagcatac tcaactatct atatttcatt aagggttatt caacataacc catgaaaaaa 2220 aatttaaaac ccaaaacacc aaaaaaaaat tt 2252 //