ID AY234383; SV 1; circular; genomic DNA; STD; VRL; 2757 BP. XX AC AY234383; XX DT 02-JUL-2003 (Rel. 76, Created) DT 25-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Tomato leaf curl Gujarat virus - [Nepal] segment DNA-A, complete sequence. XX KW . XX OS Tomato leaf curl Gujarat virus - [Nepal] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2757 RX AGRICOLA; IND44781954. RA Shih S.L., Tsai W.S., Green S.K., Hanson P.M., Valand G.B., Kalloo G., RA Shrestha S.K., Joshi S.; RT "Molecular Characterization of a New Tomato Begomovirus from India"; RL Plant Dis. 87(5):598-598(2003). XX RN [2] RP 1-2757 RA Shih S.L., Green S.K., Shrestha S.K., Joshi S.; RT ; RL Submitted (12-FEB-2003) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center, P.O. BOX RL 42, Shanhua, Tainan, Taiwan, Republic of China XX DR MD5; 47a638dc6ee7d68a0555a8c218a46761. XX FH Key Location/Qualifiers FH FT source 1..2757 FT /organism="Tomato leaf curl Gujarat virus - [Nepal]" FT /segment="DNA-A" FT /mol_type="genomic DNA" FT /country="Nepal:Panchkhal" FT /isolation_source="isolated from tomato plant with leaf FT curl symptoms in 2000" FT /clone="NepT4" FT /db_xref="taxon:269305" FT gene 144..491 FT /gene="V2" FT CDS 144..491 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:Q7TDD8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q7TDD8" FT /protein_id="AAO62608.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYFPDTVGYDLIRDL FT ISVIRARNYVEATSRYAHFHARFEGTSPSQLRQPIGEPCCCPHCPRHQSKGMGQPAHVS FT EAQNLQNVQEP" FT gene 304..1074 FT /gene="V1" FT CDS 304..1074 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q771Z1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q771Z1" FT /protein_id="AAO62609.1" FT /translation="MSKRPADMLIFTPASKVRRRLNFDSPSVSRAAAPIVRVTKAKAWA FT NRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPSGTPSDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRRFFRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1071..1475) FT /gene="C3" FT CDS complement(1071..1475) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q7TDD7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q7TDD7" FT /protein_id="AAO62610.1" FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHQNRPFLMNEDI FT ITIQIQFNHNLRKVLGIHKCFLTYRIWMTSQPPTGRFLRVFKTQVLKFLNNLGVISLNN FT VIRAVNYVLWDALTQTTFVDSSHIIKFNIY" FT gene complement(1216..1620) FT /gene="C2" FT CDS complement(1216..1620) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q7TDD6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q7TDD6" FT /protein_id="AAO62611.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALT FT CHDHGFTHRGTHHCSSSREWRVYLGDSKSPIFQDNRAPKPALPDERRHHHHPDTVQSQP FT EESVGDTQMFPNLPNLDDLTASDWSFLKGI" FT gene complement(1532..2608) FT /gene="C1" FT CDS complement(1532..2608) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q7TDD5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q7TDD5" FT /protein_id="AAO62612.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEKALSQLLNLQTPTFKKFIR FT ICRELHEDGSPHLHVLIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKSYM FT EKDGDVIDHGVFQIDGRSARGGCQSANDAYAEAINSGSKAQALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPMDVYVSPFLSSSFDQVPEELEEWAAENVCSPAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTTFLCNPGPNSSYKEYLDEEKNSALKNWALKNATFVTLEGPL FT YSGTNQSTAQASQEGDQT" FT gene complement(2158..2451) FT /gene="C4" FT CDS complement(2158..2451) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q771Z0" FT /protein_id="AAO62613.1" FT /translation="MGLLTCMCSSSSKESSSAKTIDSSTSHPQPGQHISIRTFRELRAQ FT AMSNPTWKKTETSLIMEFSKSMDDQLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2757 BP; 720 A; 555 C; 636 G; 846 T; 0 other; accggatggc cgcgattttt ttttttggac cccacaacgc actaactgac aaagacatgc 60 ggaccaatca cctgacgcgc tcaaagctta attgttctgt gttctctatt taaacttggg 120 caccaagtat tgtagttcgt actatgtggg atcctttgtt aaacgagttt cctgaaaccg 180 ttcacggttt tagatgtatg ttagcagtta aatatcttca gttagtagaa aagacttatt 240 ttcctgacac agtcggttac gatttaatca gggatttaat ttcagttatt agggctagaa 300 attatgtcga agcgaccagc agatatgctc attttcacgc ccgcttcgaa ggtacgtcgc 360 cgtctcaact tcgacagccc atcggtgagc cgtgctgctg cccccattgt ccgcgtcacc 420 aaagcaaagg catgggccaa ccggcccatg tatcggaagc ccagaatcta cagaatgtac 480 aggagccctg atgtgcctaa gggctgtgag ggtccgtgta aggtccaatc gttcgatgct 540 aagaacgata ttggtcacat gggtaaggtg atctgtttgt ccgatgttac gaggggaatt 600 gggctgaccc atcgagtggg taaacgtttt tgcgttaagt ctttgtattt cgtcgggaag 660 atctggatgg acgagaatat taaggtgaag aaccacacca acaccgttat gttttggata 720 gtacgtgata ggcgtcctag tgggactccc agtgattttc agcaggtttt taacgtatat 780 gataatgagc cctctactgc gactgttaag aatgaccagc gtgatcgctt tcaagtctta 840 cggaggtttc aagcgactgt tactggagga caatatgcag ccaaggagca ggcgataatt 900 agaagatttt ttcgtgttaa taattacgta gtttataatc accaggaagc tgggaagtac 960 gaaaatcata ctgagaatgc tttgttgttg tatatggcat gtactcatgc ctctaatcct 1020 gtgtatgcga ctctcaaagt gaggagttat ttctatgact cagtcacaaa ctaataaata 1080 ttaaatttta ttatatgcga actgtctaca aatgttgttt gcgtcaatgc atcccatagt 1140 acataattca ctgctctaat tacattattc aaactaatta cacccaaatt attaagaaat 1200 ttcaacactt gtgttttaaa tacccttaag aaacgaccag tcggaggctg tgaggtcatc 1260 cagattcggt aggttaggaa acatttgtgt atccccaaca ctttcctcag gttgtgattg 1320 aactgtatct ggatggtgat gatgtcttcg ttcatcagga agggccggtt ttggtgctct 1380 gttatcttga aatatagggg attttgaatc tcccagataa acacgccatt ctctgcttga 1440 gctgcagtga tgagttcccc tgtgcgtgaa tccatggtcg tggcaggtta atgctatgaa 1500 gtaagaacag ccacacggta gatcaactcg tctacgtctg gtccccttct tggctagcct 1560 gtgctgtact ttgattggta cctgagtaga gtgggccttc gagggtgacg aaggtcgcat 1620 tttttaaagc ccagtttttt agtgcagaat tcttttcctc atccaagtat tctttatagc 1680 tggagttggg tcctggattg cagaggaagg tagtgggaat tccgccttta atttgaactg 1740 gcttcccgta ctttgtattt gattgccagt ccctttgggc ccccatgaat tctttaaagt 1800 gctttaggta gtgggggtcg acgtcatcaa tgacgttgta ccaggcatca ttactgtaaa 1860 cctttgggct aaggtctaga tgaccacaca aataattatg tggtcccaat gatctggccc 1920 acatagtctt ccccgtccta ctgtcaccct caattactat acttatgggt ctcagaggcc 1980 gcgcagcggg actgcagacg ttctcggcag cccactcttc aagttcttct ggaacttggt 2040 cgaaagaaga agataaaaaa ggtgaaacat aaacatccat tggaggtgta aaaatcctat 2100 ctaaattaga atttaaattg tgaaattgta aaacaaaatc tttgggagct ttctccctta 2160 atatattgag ggcctgagct ttggaccctg aattgattgc ctcggcatat gcgtcgttgg 2220 cagattggca acctcctcta gctgatcgtc catcgatttg gaaaactcca tgatcaatga 2280 cgtctccgtc tttttccatg taggatttga catcgcttga gctcttagct ccctgaatgt 2340 tcggatggaa atgtgctgac ctggttgggg atgtgaggtc gaagaatcta ttgtttttgc 2400 actggaactt tccttcgaac tggatgagca catgcaagtg aggagaccca tcttcgtgaa 2460 gctctctgca aattctaata aattttttga aagtgggtgt ttggagattt aataattggg 2520 aaagtgcctt ttctttagtt agagagcact tgggataagt gagaaaataa tttttggcat 2580 ttattttaaa gcgattgggg gctgccatgt tgacttggtc aatcggtgtc tctcaactct 2640 ctctatgtat cggtgtattg gagtcctata tatatggaga ctctaatggc ataaatgtaa 2700 atattgaact taaatcaaaa cccttacgct ccaaaaagcg gccatccgta taatatt 2757 //