ID   AY222840; SV 1; linear; genomic RNA; STD; VRL; 1175 BP.
XX
AC   AY222840;
XX
DT   31-AUG-2003 (Rel. 77, Created)
DT   24-MAR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Macrobrachium rosenbergii nodavirus segment RNA-2, complete sequence.
XX
KW   .
XX
OS   Macrobrachium rosenbergii nodavirus
OC   Viruses; Riboviria; Nodaviridae; unclassified Nodaviridae.
XX
RN   [1]
RP   1-1175
RX   DOI; 10.1046/j.1365-2761.2003.00493.x.
RX   PUBMED; 14653316.
RA   Sri Widada J., Durand S., Cambournac I., Qian D., Shi Z., Dejonghe E.,
RA   Richard V., Bonami J.R.;
RT   "Genome-based detection methods of Macrobrachium rosenbergii nodavirus, a
RT   pathogen of the giant freshwater prawn, Macrobrachium rosenbergii dot-blot,
RT   in situ hybridization and RT-PCR";
RL   J. Fish Dis. 26(10):583-590(2003).
XX
RN   [2]
RP   1-1175
RA   Sri Widada J., Bonami J.-R., Richard V.R.;
RT   "Nucleotide sequence of the MrNV-RNA-2 of Macrobrachium rosenbergii";
RL   Unpublished.
XX
RN   [3]
RP   1-1175
RA   Sri Widada J., Bonami J.-R., Richard V.R.;
RT   ;
RL   Submitted (22-JAN-2003) to the INSDC.
RL   DRIM (CNRS), Universite Montpellier, Place E. Bataillon, Montpellier 34095,
RL   France
XX
DR   MD5; 4199177ef9ae094c4bda09dee47e134e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1175
FT                   /organism="Macrobrachium rosenbergii nodavirus"
FT                   /segment="RNA-2"
FT                   /host="Macrobrachium rosenbergii"
FT                   /mol_type="genomic RNA"
FT                   /note="nodavirus of crustacean origin"
FT                   /db_xref="taxon:222557"
FT   CDS             38..1153
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="PDB:5YKU"
FT                   /db_xref="PDB:5YKV"
FT                   /db_xref="PDB:5YKX"
FT                   /db_xref="UniProtKB/TrEMBL:Q6XNL3"
FT                   /protein_id="AAO60070.1"
FT                   /translation="MARGKQNSNQIQNNSNANGKRRKRNRRNRNPQTVPNFNPIVAKPT
FT                   VAPLQTNIRSARSDVNAITVLNGSDFLTTVKVRGSNNLTDSKSRILVKQPISASSFLGT
FT                   RISGLSQFWERYRWHKAAVRYVPAVPNTLACQLIGYIDTDPLDDPNVILDVDQLLRQAT
FT                   SQVGARQWNFSDTTTIPLIVRRDDQLYYTGQDKENVRFSQQGVFYLLQVTTLLNISGEA
FT                   ITNDLISGSLYLDWVCGFSMPQINPTPVEVSQLTYNADTIGNWVPPTELKQTYTQDITG
FT                   LKPNSKFIIVPYMDRVSSEVLQKCTITCNEVDAVGSISYFDTSAIKCDGYISFQANSIG
FT                   EATFTLVTDYQGAVDPKPYQYRIIRAIVGNN"
XX
SQ   Sequence 1175 BP; 352 A; 242 C; 231 G; 350 T; 0 other;
     aaaggatatt cgatattcta tcatctttaa catcaagatg gctagaggta aacaaaattc        60
     taatcagatt caaaacaata gtaacgcaaa cggcaagcgc cgtaagcgta atcgaaggaa       120
     tcgcaatccg cagacggttc ccaactttaa ccccattgtc gcaaagccga cggttgcccc       180
     acttcaaact aacattagaa gtgctaggag tgacgttaat gccatcactg ttttaaatgg       240
     cagtgatttt cttacaactg tcaaagtccg aggttctaac aatttaactg attccaagtc       300
     tagaatcttg gttaagcaac caatttctgc gagttctttt cttggtacca gaatttctgg       360
     tctatcgcaa ttttgggagc gttatagatg gcacaaggct gcagttagat atgttcctgc       420
     agtacccaat actttagctt gccaacttat tggttacatc gatacagatc cactagatga       480
     ccccaacgtt atcctcgatg tcgatcagtt acttaggcag gctacgtcac aagtgggtgc       540
     gcggcagtgg aatttctctg atacaacaac tattccattg attgtcaggc gtgatgatca       600
     attgtactat actggtcaag ataaagagaa cgttcgtttc tctcaacagg gtgtatttta       660
     cctcttgcaa gtgactacac tacttaatat tagtggtgaa gccattacaa atgatttaat       720
     ttcaggttca ctatatttag attgggtctg tggattttcc atgccacaaa ttaatcctac       780
     accagtggaa gtttcacagc taacttacaa tgcggatact attggcaatt gggttccacc       840
     aacagaactc aagcaaactt atactcaaga tattactggt ttgaagccaa attctaaatt       900
     tattatcgta ccctatatgg atagagtaag ttctgaagta ctgcagaagt gcacaatcac       960
     ttgtaatgag gttgacgcag ttggttcaat ctcatatttc gatactagcg ctatcaaatg      1020
     tgatgggtac atatcatttc aggccaatag cattggtgaa gcaaccttca ccttagtgac      1080
     cgattatcag ggtgcggttg accctaaacc ctatcagtat aggattatca gagctatcgt      1140
     cggcaataat taggttgtca tatctagcac atgat                                 1175
//