ID   AY222743; SV 1; linear; genomic RNA; STD; VRL; 2031 BP.
XX
AC   AY222743;
XX
DT   01-FEB-2004 (Rel. 78, Created)
DT   01-FEB-2004 (Rel. 78, Last updated, Version 1)
XX
DE   Sugarcane mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-2031
RA   Gambley C.F., Thomas J.E., Magnaye L.V., Herradura L.;
RT   "Abaca mosaic virus: A distinct strain of Sugarcane mosaic virus";
RL   Unpublished.
XX
RN   [2]
RP   1-2031
RA   Gambley C.F., Thomas J.E.;
RT   ;
RL   Submitted (22-JAN-2003) to the INSDC.
RL   Agency for Food and Fibre Sciences, Department of Primary Industries, 80
RL   Meiers Road, Indooroopilly, Brisbane, Qld 4068, Australia
XX
DR   MD5; 01db41c70e7b6552a5e5f0e1a55c405e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2031
FT                   /organism="Sugarcane mosaic virus"
FT                   /host="Musa textilis"
FT                   /strain="Abaca"
FT                   /isolate="720"
FT                   /mol_type="genomic RNA"
FT                   /country="Philippines"
FT                   /clone="p720PP7"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..1798
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6XNL7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q6XNL7"
FT                   /protein_id="AAO53233.1"
FT                   /translation="QFDSSLTPYLINAVLHIRLQFMEDWELGAQMLRNLYTEIVYTPIA
FT                   TPDGSVIKKFKGNNSGQPSTVVDNTLMVIIAFNYAMLSSGIPKDKINDCCRMFANGDDL
FT                   LLAVHPDYEYILDGFQNHFGNLGLNFEFTSRTKDKSELWFMSTQGIKCEGIYIPKLERE
FT                   RIVAILEWDRSNLPEHRLEAICAAMVEAWGYPDLVQEIRKFYAWLLEMQPFANLAKEGS
FT                   APYIAETALRNLYLGSGIKEEEIEKYFKQFIKDLPGYIEDYNEDVFHQSGTVDAGAQGG
FT                   KNNTDNNAGSGGRPETQGIAPPAAGGAAGGNTGNQAGSGDGQAGSGGNNNQARSGTAGG
FT                   QAGSGGTNNQAGTGEIGGQKDKDVDAGTTGIISVPKLKAMSKKMRLPKAKGKDVLHLDF
FT                   LLTYKPQQQDISNTRATKEEFDRWYDAIKKEYEIDDSQMTVVMSGLMVWCIENGCSPNI
FT                   NGNWTMMDGEEQRVFPLKPVIENASPTFRQVMHHFSDAAEAYIEYRNSTERYMPRYGLQ
FT                   RNLTDYSLARYAFDFYELTSRTPARAKEAHMQMKAAAVRGSNTRLFGLDGNVGEIQENT
FT                   ERHTAGDVSRNMHSLLGVQQHH"
FT   mat_peptide     <1..811
FT                   /product="nuclear inclusion protein NIb"
FT                   /note="replicase"
FT   mat_peptide     812..1795
FT                   /product="coat protein"
FT   3'UTR           1799..2031
XX
SQ   Sequence 2031 BP; 626 A; 418 C; 503 G; 484 T; 0 other;
     ccagtttgac agctcactaa ctccatatct tattaatgct gtgctacaca ttcgtttaca        60
     atttatggaa gactgggagt taggagccca gatgttgcga aatttataca cagaaattgt       120
     ttatacgcca atcgcaacac ctgacgggtc tgttatcaag aaatttaaag gaaacaatag       180
     tgggcaaccg tctacagtcg ttgacaacac acttatggtc atcatcgcat ttaattacgc       240
     aatgttgtca agtggcattc ctaaagacaa gattaatgac tgctgtagga tgtttgcaaa       300
     cggtgacgat ttgctcttag cagtgcatcc ggattatgaa tacatattgg acggatttca       360
     aaatcatttt ggaaaccttg gtcttaattt tgagttcaca tcgaggacaa aggataaatc       420
     agagctatgg ttcatgtcaa cacaaggaat taagtgtgaa ggtatctata taccaaaact       480
     cgaaagagag agaatagtcg cgatcctcga atgggaccga tcgaacttgc ctgagcatcg       540
     tcttgaagct atctgtgcag caatggttga agcatggggt tacccggact tggtgcaaga       600
     aatacggaaa ttttatgcat ggctgcttga aatgcaacca tttgcaaatt tagcaaaaga       660
     aggctcagca ccatatattg ccgagacagc tctgcgtaat ctctacctcg gctcaggaat       720
     taaggaagag gagatcgaga aatacttcaa acaattcatc aaagatcttc ctggatacat       780
     tgaggactat aatgaagatg tcttccatca atcaggaact gtagatgcag gagctcaagg       840
     agggaagaat aacacagaca acaacgccgg cagcggagga agaccagaaa cacaaggaat       900
     tgcaccacct gctgcaggtg gcgccgctgg tggcaacact ggaaaccaag caggttctgg       960
     tgatggccaa gctggttctg gtggcaacaa taaccaagca agatccggta cagcaggtgg      1020
     ccaggctggc tctggtggca ccaataacca ggcaggcact ggtgagatag ggggccagaa      1080
     agataaggat gtagacgctg gcacaacagg aataatatcc gtgccaaaac tcaaagccat      1140
     gtcaaagaag atgcgtctac cgaaagcgaa aggaaaggat gtcttgcacc tagactttct      1200
     tctaacatac aaaccacaac agcaagacat atcgaacaca agagcaacca aggaagagtt      1260
     cgatagatgg tatgatgcca taaagaagga gtacgagatt gacgattcac aaatgacagt      1320
     tgtcatgagt ggattgatgg tttggtgcat cgagaacggt tgctcaccga acattaatgg      1380
     aaattggacg atgatggatg gagaagaaca gcgggttttt ccactcaaac cagtcattga      1440
     gaatgcatct ccaactttcc gacaagtaat gcaccacttt agtgatgcag ctgaagcgta      1500
     catagagtac aggaactcta cagagcgata catgccgaga tacggacttc agcgaaatct      1560
     caccgactat agcttagcaa ggtatgcttt tgatttttat gaattaactt cacgcacacc      1620
     agctagagct aaggaagccc acatgcagat gaaagccgca gcagttcgtg gctcaaacac      1680
     acggctgttc ggtctggacg gaaatgtcgg cgagatccag gagaatacag agagacacac      1740
     agctggcgat gttagtcgca atatgcactc tctgttggga gtgcagcagc accactagtc      1800
     ttctggaaac cctgtttgca gtacctataa tatgtactaa tatatagtat gctggtgagg      1860
     ctgtgcctcg tttactattt tattacgtat gtatttacag cgtgaaccag tctgcaggac      1920
     acagggttgg acccagtgtc ttctggtgta gcgtgtacta gcgtcgagcc acgtgacgga      1980
     cagcatttgg tgtggctttg ccattggtgc tgcgagtctc ttggtgagag a               2031
//