ID   AY216482; SV 1; linear; genomic RNA; STD; VRL; 1378 BP.
XX
AC   AY216482;
XX
DT   14-MAR-2003 (Rel. 75, Created)
DT   14-MAR-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Soybean mosaic virus strain 413 helper component protease gene, partial
DE   cds.
XX
KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage;
OC   Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1378
RA   Domier L.L., Latorre I.J., Stienlage T.A., McCoppin N.K., Hartman G.L.;
RT   "Variability and transmission by Aphis glycines of North American and Asian
RT   soybean mosaic virus isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1378
RA   Domier L.L., Latorre I.J., Stienlage T.A., McCoppin N.K., Hartman G.L.;
RT   ;
RL   Submitted (09-JAN-2003) to the INSDC.
RL   Dept. Crop Sciences, Univ. of Illinois, USDA-ARS, 1102 S. Goodwin Ave.,
RL   Urbana, IL 61801, USA
XX
DR   MD5; 402fe5fe7ffe7cd8381d939df893c707.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1378
FT                   /organism="Soybean mosaic virus"
FT                   /strain="413"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12222"
FT   CDS             <1..>1378
FT                   /codon_start=1
FT                   /product="helper component protease"
FT                   /db_xref="GOA:Q80JQ3"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="UniProtKB/TrEMBL:Q80JQ3"
FT                   /protein_id="AAO60087.1"
FT                   /translation="SQTPEAQFFRGWKKVFDKMPPHVENHECTIDFTNEQCGELAAAIS
FT                   QSVFPVKKLSCKQCRQHIKNLSWEEYKQFLLAHMGCHRAEWENIQKVDGMKYVKKVIET
FT                   STAENASLQTSMEIVRLTQNYKSTHMLQIQDINKALMKGPSVTQSELEQASKQLLAMTQ
FT                   WWKNHMALTDEDALKVFRNKRSSKALLNPSLLCDNQLDKNGNFVWGERGRHSKRFFANY
FT                   FEEVIPSEGYSKYVIRKNPNGQRELAIGSLIVPLNFERARMALQGKSVTREPITMSCIS
FT                   RQDGNFVYPCCCVTHDDGKAFYSELKSPTKRHLVIGTSGDPKYIDLPATDADRMYIAKE
FT                   GYCYLNIFLAMLVNVNEDEAKDFTKMVRDVIVPRLGKWPTMLDVATAAYMLTVFHPETR
FT                   NAELPRILVDHACQTMHVIDSFGSLTVGYHVLKAGTVNQLIQFASNDLQSEMKFYRVGG
FT                   E"
XX
SQ   Sequence 1378 BP; 435 A; 241 C; 330 G; 372 T; 0 other;
     tcccaaactc ctgaagctca gtttttccgc ggttggaaga aagtgtttga taaaatgccg        60
     ccacatgtgg agaatcatga atgcaccatt gattttacaa atgaacaatg tggtgaattg       120
     gcagcggcaa ttagccaatc agtttttcca gttaagaagt tatcatgtaa gcaatgtcgg       180
     caacacatca agaacctgag ttgggaggag tataaacaat tccttttagc tcatatgggt       240
     tgtcacaggg ccgaatggga gaatatccag aaagttgatg gcatgaagta tgtgaagaaa       300
     gtgattgaga catcaactgc agaaaacgca agtttgcaaa catcaatgga gattgtgcgt       360
     ttaacgcaga actataagag tactcacatg ctgcagatac aggatattaa taaggctcta       420
     atgaaaggtc catcagtgac acaaagtgag ctagagcagg cctctaaaca gctacttgca       480
     atgacacaat ggtggaagaa tcacatggct ttaactgatg aagatgcact taaggtgttc       540
     aggaataagc gatcttccaa agcgctactt aatccaagtt tactttgtga taaccagtta       600
     gacaagaatg gtaattttgt ttggggagag cgtggcaggc attcaaagcg attctttgca       660
     aattactttg aagaggtaat tccctctgaa gggtacagca aatatgtgat taggaagaat       720
     ccaaatggac aaagggaatt agcgattggg tctctaattg tgccgctgaa ttttgagcgc       780
     gctcggatgg cattacaggg aaagagcgtc acaagagagc cgattacaat gtcatgtata       840
     tcaagacagg atggaaactt tgtataccct tgttgttgcg tcacgcatga tgatggaaaa       900
     gctttctatt ctgagctcaa gagtcctaca aagcgccact tggttattgg gacatctggc       960
     gatccaaagt atattgatct accagccact gatgcagaca ggatgtacat agctaaagaa      1020
     ggatattgtt acttaaatat cttcttggca atgttggtca atgtaaatga agatgaagcc      1080
     aaggatttca caaagatggt aagggatgtt attgtaccga gactaggaaa gtggccgaca      1140
     atgttagatg tggcaacagc tgcatatatg ctaacagtct ttcaccctga aaccaggaat      1200
     gctgagctcc cacgtatttt ggttgaccat gcgtgccaaa ccatgcacgt gatagactct      1260
     tttggatcct tgacagttgg ataccatgtt cttaaagctg gtacagttaa ccaattgatt      1320
     caatttgctt ctaatgatct tcagagtgag atgaaatttt atagagttgg tggtgaag        1378
//