ID   AY216480; SV 1; linear; genomic RNA; STD; VRL; 1387 BP.
XX
AC   AY216480;
XX
DT   14-MAR-2003 (Rel. 75, Created)
DT   14-MAR-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Soybean mosaic virus strain 1083 helper component protease gene, partial
DE   cds.
XX
KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage;
OC   Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1387
RA   Domier L.L., Latorre I.J., Stienlage T.A., McCoppin N.K., Hartman G.L.;
RT   "Variability and transmission by Aphis glycines of North American and Asian
RT   soybean mosaic virus isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1387
RA   Domier L.L., Latorre I.J., Stienlage T.A., McCoppin N.K., Hartman G.L.;
RT   ;
RL   Submitted (09-JAN-2003) to the INSDC.
RL   Dept. Crop Sciences, Univ. of Illinois, USDA-ARS, 1102 S. Goodwin Ave.,
RL   Urbana, IL 61801, USA
XX
DR   MD5; 964d4778b7ce1103abf21cb6e6d00980.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1387
FT                   /organism="Soybean mosaic virus"
FT                   /strain="1083"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12222"
FT   CDS             <1..>1387
FT                   /codon_start=1
FT                   /product="helper component protease"
FT                   /db_xref="GOA:Q80JQ5"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="UniProtKB/TrEMBL:Q80JQ5"
FT                   /protein_id="AAO60085.1"
FT                   /translation="SQTPEAQFFRGWKKVFDKMPPHVENHECTIDFTNEQCGELAAAIS
FT                   QSVFPVKKLSCKQCRQHIKNLSWEEYKQFLLAHMGCHRAEWENIQKVDGMKYVKKVIET
FT                   STAENASLQTSMEIVRLTQNYKSTHMLQIQDINKALMKGPSVTQSELEQASKQLLAMTQ
FT                   WWKNHMALTDEDALKVFRNKRSSKALLNPSLLCDNQLDKNGNFVWGERGRHSKRFFANY
FT                   FEEVIPSEGYSKYVTRKNPNGQRELAIGSLIVPLDFERARMALQGKSVTREPITMSCIS
FT                   RQDGNFVYPCCCVTHDDGKAFYSELKSPTKRHLVIGTSGDPKYIDLPATDADRMYIAKE
FT                   GYCYLNIFLAMLVNVNEDEAKDFTKMVRDVIVPRLGKWPTMLDVATAAYMLTVFHPETR
FT                   NAELPRILVDHACQTMHVIDSFGSLTVGYHVLKAGTVNQLIQFASNDLQSEMKFYRVGG
FT                   EVQQ"
XX
SQ   Sequence 1387 BP; 431 A; 246 C; 338 G; 372 T; 0 other;
     tctcaaactc ctgaagccca gtttttccgt ggttggaaga aagtgtttga taaaatgccg        60
     ccacatgtgg agaatcatga atgcaccatt gattttacaa atgaacaatg tggtgaattg       120
     gcagcggcaa ttagccagtc agtttttcca gttaagaagt tatcatgtaa gcaatgtcgg       180
     cagcacatca agaacctaag ttgggaggag tataaacaat tcctcctagc tcatatgggt       240
     tgtcataggg ccgaatggga gaatatccag aaagttgatg gtatgaagta cgtgaagaaa       300
     gtgattgaga catcaactgc ggaaaacgca agtctgcaaa catcaatgga gattgtgcgt       360
     ttaacgcaga actataagag tactcacatg ctgcagatac aggatatcaa taaggctcta       420
     atgaaaggtc catcagtgac gcaaagtgag ctagagcagg cctctaaaca gctacttgca       480
     atgacacaat ggtggaagaa tcacatggct ttaactgatg aagacgcact taaagtgttc       540
     aggaacaagc gatcttccaa agcgctactt aatccaagtt tactttgtga taaccagttg       600
     gacaagaatg gtaattttgt ttggggagag cgtggcaggc attcaaagcg gttctttgca       660
     aattactttg aagaggtgat tccctctgaa gggtacagca agtatgtgac taggaagaat       720
     ccaaatggac aaagggaact ggcgattggg tctctaattg tgccgctaga ctttgagcgc       780
     gctcggatgg cattacaggg caagagcgtc acaagagagc cgattacaat gtcatgtata       840
     tcaagacaag atggaaactt tgtgtatcct tgttgttgcg tcacgcatga tgatggaaaa       900
     gctttttatt ctgagctcaa gagtcctaca aagcgccact tggttattgg cacatctggc       960
     gatccaaaat atattgatct accagccact gatgcagata ggatgtacat agctaaagaa      1020
     ggatattgtt acctgaatat cttcttggca atgttggtta atgtaaatga agatgaagcc      1080
     aaggatttca caaagatggt aagggatgtt attgtaccaa gactaggaaa gtggccgaca      1140
     atgttagatg tggcaacagc tgcatatatg ctaacagtct ttcatcctga gactaggaat      1200
     gctgagctcc cacgtatttt ggttgaccat gcgtgtcaaa ccatgcacgt gatagactct      1260
     tttggatctt tgacagttgg ataccatgtt cttaaagctg gtacagttaa ccaattgatt      1320
     caatttgctt ctaatgacct tcagagtgag atgaaatttt atagagttgg tggtgaagtg      1380
     caacaga                                                                1387
//