ID   AY216478; SV 1; linear; genomic RNA; STD; VRL; 1376 BP.
XX
AC   AY216478;
XX
DT   14-MAR-2003 (Rel. 75, Created)
DT   14-MAR-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Soybean mosaic virus strain 1071 helper component protease gene, partial
DE   cds.
XX
KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage;
OC   Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1376
RA   Domier L.L., Latorre I.J., Stienlage T.A., McCoppin N.K., Hartman G.L.;
RT   "Variability and transmission by Aphis glycines of North American and Asian
RT   soybean mosaic virus isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1376
RA   Domier L.L., Latorre I.J., Stienlage T.A., McCoppin N.K., Hartman G.L.;
RT   ;
RL   Submitted (09-JAN-2003) to the INSDC.
RL   Dept. Crop Sciences, Univ. of Illinois, USDA-ARS, 1102 S. Goodwin Ave.,
RL   Urbana, IL 61801, USA
XX
DR   MD5; 3c01f03ec4993cf36147f0a5afdda70c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1376
FT                   /organism="Soybean mosaic virus"
FT                   /strain="1071"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12222"
FT   CDS             <1..>1376
FT                   /codon_start=1
FT                   /product="helper component protease"
FT                   /db_xref="GOA:Q80JQ7"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="UniProtKB/TrEMBL:Q80JQ7"
FT                   /protein_id="AAO60083.1"
FT                   /translation="SQTPEAQFFRGWKKVFDKMPPHVENHECTIDFTNEQCGELAAAIS
FT                   QSVFPVKKLSCKQCRQHIKNLSWEEYKQFLLAHMGCHRAEWENIQKVDGMKYVKKVIET
FT                   STAENASLQTSMEIVRLTQNYKSTHMLQIQDINKALMKGPSVTQSELEQASKQLLAMTQ
FT                   WWKNHMALTDEDALKVFRNKRSSKALLNPSLLCDNQLDKNGNFVWGERGRHSKRFFANY
FT                   FEEVIPSEGYSKYVIRKNPNGQRELAIGSLIVPLDFERARMALQGKSVTREPITMSCIS
FT                   RQDGNFVYPCCCVTHDDGKAFYSELKSPTKRHLVIGTSGDPKYIDLPATDADRMYIAKE
FT                   GYCYLNIFLAMLVNVNEDEAKDFTKMVRDVIVPRLGKWPTMLDVATAAYMLTVFHPETR
FT                   NAELPRILVDHACQTMHVIDSFGSLTVGYHVLKAGTVNQLIQFASNDLQSEMKFYRVGG
FT                   "
XX
SQ   Sequence 1376 BP; 435 A; 246 C; 329 G; 366 T; 0 other;
     tctcagactc ctgaagccca gtttttccgc ggttggaaga aagtgtttga taaaatgccg        60
     ccacatgtgg agaatcatga atgcaccatt gattttacaa atgaacaatg tggtgaattg       120
     gcagcggcaa ttagccaatc agtttttcca gttaagaagt tatcatgcaa gcaatgtcgg       180
     cagcacatca agaacctaag ttgggaggag tataaacaat tccttttagc tcatatgggt       240
     tgtcacagag ccgaatggga gaatatccag aaagttgatg gtatgaagta cgtgaagaaa       300
     gtgattgaga catcaactgc agaaaacgca agtctgcaaa catcaatgga gattgtgcgt       360
     ttaacgcaga actataagag tactcacatg ctgcagatac aggatatcaa taaggctcta       420
     atgaaaggtc catcagtgac gcaaagtgag ctagagcagg catctaaaca gctacttgca       480
     atgacacaat ggtggaagaa ccacatggct ttaactgatg aagatgcact taaagtattc       540
     aggaacaagc gatcttccaa agcactactt aatccaagtt tactttgtga taatcagttg       600
     gacaagaatg gtaattttgt ttggggagag cgtggcaggc attcaaagcg attctttgca       660
     aattactttg aagaggtaat tccttctgaa gggtacagca agtatgtgat taggaagaat       720
     ccaaatggac aaagggaatt agcgattggg tctctaattg tgccgctgga ttttgagcgc       780
     gctcggatgg cattacaggg caagagcgtc acaagagagc cgattacaat gtcatgcata       840
     tcaagacagg atggaaactt tgtgtatcct tgctgttgtg tcacgcatga tgatggaaaa       900
     gctttctatt ctgagctcaa gagtcccaca aagcgccact tggttattgg aacatctggc       960
     gatccaaaat atattgatct accagccact gatgcagaca ggatgtacat agctaaagaa      1020
     ggatattgtt acctaaatat cttcttggca atgttggtca atgtaaatga agatgaagcc      1080
     aaggatttca caaagatggt aagggatgtt attgtaccaa gactaggaaa gtggccgaca      1140
     atgttagatg tggcaacagc tgcatatatg ctaacagtct ttcaccctga aaccaggaat      1200
     gctgagctcc cacgtatttt ggttgaccat gcgtgtcaaa ccatgcacgt gatagactct      1260
     tttggatcct tgacagttgg ataccatgtt ctgaaagctg gtacagttaa ccaattgatt      1320
     caatttgctt ctaatgacct tcagagtgag atgaaatttt atagagttgg tggtga          1376
//