ID AY196094; SV 2; linear; genomic RNA; STD; VRL; 2614 BP. XX AC AY196094; AF487409; XX DT 25-FEB-2003 (Rel. 74, Created) DT 20-DEC-2004 (Rel. 82, Last updated, Version 3) XX DE Potato mop-top virus isolate 54-15 coat protein and readthrough coat DE protein genes, partial cds. XX KW . XX OS Potato mop-top virus OC Viruses; Riboviria; Virgaviridae; Pomovirus. XX RN [1] RP 1-2614 RX PUBMED; 12828342. RA Cerovska N., Moravec T., Rosecka P., Filigarova M., Pecenkova T.; RT "Nucleotide sequences of coat protein coding regions of six potato mop-top RT virus isolates"; RL Acta Virol. 47(1):37-40(2003). XX RN [2] RP 1-2614 RX DOI; 10.1023/B:VIRU.0000036385.87739.e4. RX PUBMED; 15284485. RA Pecenkova T., Moravec T., Filigarova M., Rosecka P., Cerovska N.; RT "Extended sequence analysis of three Danish potato mop-top virus (PMTV) RT isolates"; RL Virus Genes 29(2):249-255(2004). XX RN [3] RP 1-2614 RA Cerovska N., Moravec T., Pecenkova T., Vlcek C.; RT "The nucleotide sequence of readthrough region of coat protein gene of PMTV RT isolate 54-15"; RL Unpublished. XX RN [4] RP 1-2614 RA Moravec T., Cerovska N., Nielsen S.L., Vlcek C.; RT ; RL Submitted (22-FEB-2002) to the INSDC. RL Virology, Institute of Experimental Botany, Czech Academy of Sciences, Na RL Karlovce 1a, Prague 6 16000, Czech Republic XX RN [5] RP 1-2614 RA Cerovska N., Moravec T., Pecenkova T., Vlcek C.; RT ; RL Submitted (12-DEC-2002) to the INSDC. RL Virology, Institute of Experimental Botany, Czech Academy of Sciences, Na RL Karlovce 1a, Prague 6 16000, Czech Republic XX RN [6] RC Sequence update by submitter RP 1-2614 RA Cerovska N., Moravec T., Pecenkova T., Vlcek C.; RT ; RL Submitted (06-OCT-2003) to the INSDC. RL Virology, Institute of Experimental Botany, Czech Academy of Sciences, Na RL Karlovce 1a, Prague 6 16000, Czech Republic XX DR MD5; eb2d90d62faec5cf553ecc1dfda474ff. DR EuropePMC; PMC5446823; 28611505. XX CC On or before Oct 6, 2003 this sequence version replaced CC gi:27573533, gi:28542761. XX FH Key Location/Qualifiers FH FT source 1..2614 FT /organism="Potato mop-top virus" FT /isolate="54-15" FT /mol_type="genomic RNA" FT /country="Denmark" FT /db_xref="taxon:37128" FT CDS <1..2458 FT /codon_start=2 FT /transl_except=(pos:509..511,aa:OTHER) FT /product="readthrough coat protein" FT /note="readthrough region; cp" FT /db_xref="GOA:Q80PW7" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q80PW7" FT /protein_id="AAO42618.2" FT /translation="RRAAVENRYDAWDHEQAMKAAVRKFISYDQFSAQLRNWREARLNI FT IEHATSVLSQVSNLGRTHFYSRTERFGGSSIVGDKLYVCLNETRMKTALNNIIVALQTV FT NGEGRARRLCPREASANTGGEDSALNVAHQLAEVDDLLTDESFLREAVFTQDKYELVNG FT LRWAGAXQLTAQAFWFDVNAAIDEIDNRLLAAAALRLLPGQANHVDGLVSINYAQLDRA FT LSVVGGNILPQTLEITRDERKRQLPEVRVIDGERVTIRNKDEATVIRNHGQGLPWLLAF FT LLLLLSVVVVYSTIYLNDWLYRLSVVRHGKPGGGAARKLSGMSDWLCSRLRARGALNVN FT RMRKKQACDPSPTGLRKFLTCYNFSYELWDPTGSYDDAQRRIIAEQNSFVEAVRAIDEG FT DRELAEACLTNVRRILRRHLNYRPDYFDIIEAKAVYLVTVLTNAMSGPVVGVDDDERRA FT VVAAFNPSDCGLPNLDSCSLDEIKNFDLSEVVIGEGTNVEQARGYLNLCRNIQCMIETI FT GTVQFLGVLSSYTGPQYPCISQAFAEDKRIRKERLKDKDNITTADIIAYLVSGVMAAYA FT LVAVSKGGITLFKFMKNYAGGGGDGPGSSRRIRQLEAALPSLPQPEELTMMERLRRLQS FT SDNDLALRRNPSDMLSQVVRDVVADVDSSDIAEFLNDPARMTEAALEIRLTRIMSAEGS FT PVDVIEPGGQELISMQVHGESLTVINAGTDSPTVIRSASLSTRHRSSGIEIGSFAVDKV FT LPYEVEGENDDHGDAGKKPTVAQALMIGGGAVKGQGNLGVTNGKELLKVLGSSRSIGKM FT SGKMAV" FT CDS <1..511 FT /codon_start=2 FT /product="coat protein" FT /db_xref="GOA:Q772M4" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q772M4" FT /protein_id="AAL92111.3" FT /translation="RRAAVENRYDAWDHEQAMKAAVRKFISYDQFSAQLRNWREARLNI FT IEHATSVLSQVSNLGRTHFYSRTERFGGSSIVGDKLYVCLNETRMKTALNNIIVALQTV FT NGEGRARRLCPREASANTGGEDSALNVAHQLAEVDDLLTDESFLREAVFTQDKYELVNG FT LRWAGA" XX SQ Sequence 2614 BP; 698 A; 475 C; 746 G; 695 T; 0 other; gcgaagagca gccgtcgaga atagatatga cgcttgggac catgagcagg ccatgaaggc 60 tgccgtgagg aagtttattt cttacgatca attctcagct cagttaagaa actggcgcga 120 agctaggtta aacataattg aacatgccac tagcgtgttg agccaggtgt ctaatttagg 180 tagaactcat ttctacagta gaaccgaacg ctttggtgga agttcaattg ttggtgataa 240 attgtacgta tgtctgaatg aaaccagaat gaaaaccgcg ttgaataata taattgtagc 300 gttgcagaca gtgaacggcg aagggcgggc aagacgatta tgtccgagag aagcttccgc 360 gaacaccggc ggggaggata gcgctctgaa tgtggcacat caactcgcag aggtggacga 420 tttattaact gatgaaagtt ttttgagaga agctgttttt actcaggaca aatatgagct 480 cgtgaacggg ttacgctggg ctggtgcata gcaattaacc gctcaggctt tttggtttga 540 cgtcaacgcc gctatcgacg aaattgataa tcgactgcta gcggcggctg cgttaagact 600 attgcctggg caggcaaatc acgtggatgg tctagtgtct ataaattacg cacaattgga 660 tagagcattg agtgttgttg gtgggaatat tttacctcag acgttggaga taactcgtga 720 cgaaagaaaa aggcaattac ctgaggtcag agttatcgac ggcgagcgtg tcactattcg 780 taacaaagat gaggcaacgg tcattagaaa tcatggtcag ggacttcctt ggctattagc 840 gtttttactg ttgttgttat ctgttgtggt ggtgtattct acaatatacc tgaacgactg 900 gttgtatcgg ttaagtgtgg taaggcatgg gaaacctggc ggtggtgcag ctcgtaagct 960 gtcgggtatg tcggactggt tgtgcagtcg cttaagggcc agaggcgctt tgaatgtgaa 1020 taggatgagg aagaaacaag catgcgatcc gtcgcccact gggttgcgga agttccttac 1080 ttgttataac ttttcttatg aactttggga tcctactggt agttatgacg atgcgcagcg 1140 gagaattata gcggaacaga actcatttgt ggaagccgtg agggccatag atgaaggtga 1200 cagggagttg gctgaggcgt gtttgactaa tgttagacgg atcctcagga ggcatcttaa 1260 ttaccgacct gattattttg atattattga agcgaaggcg gtatatttgg tgacagtgct 1320 gacaaacgca atgtcggggc cagttgttgg cgttgacgat gacgagcgga gagcggtggt 1380 agccgcgttt aatccgtcag actgtgggtt accgaatttg gatagttgct ctttggacga 1440 aatcaagaat tttgatttgt ccgaagtggt gatcggtgag ggtaccaatg ttgaacaagc 1500 aagagggtat cttaatctct gtagaaatat tcagtgtatg attgagacaa ttggcaccgt 1560 tcaatttctt ggtgtgttgt cgtcgtatac aggtcctcag tatccttgta tatcccaagc 1620 ttttgctgag gataagagga taagaaaaga gaggctgaaa gataaggaca atataacgac 1680 agcggatatt attgcctatt tggtgagtgg ggtaatggca gcctacgctc ttgtggcagt 1740 aagtaaagga gggatcacac tgtttaagtt tatgaagaac tatgcgggtg gaggtggtga 1800 cgggcctggt tcaagcagaa gaataagaca attagaggcc gctttaccct cccttccgca 1860 gccagaagaa ctgaccatga tggaacgttt gagaagactt caatcttccg ataacgattt 1920 agctttgaga aggaacccgt ccgatatgct tagtcaggtc gtacgtgacg ttgtagccga 1980 tgtagactcc agcgatatcg ctgagttttt gaatgatcct gctaggatga ccgaagcggc 2040 tctggagatc cgactgacca gaataatgag tgctgaaggt tcaccggtgg atgtaattga 2100 gccagggggc caggaactta tttccatgca agtgcatgga gaaagtctaa ccgtcataaa 2160 tgccggcacc gactctccca cagtgatcag atccgcgtcc ttgtcgacgc ggcaccgtag 2220 ttctggtata gaaatcggtt cttttgcagt ggataaagtg ctgccttacg aggtggaagg 2280 cgaaaacgac gatcatggtg acgccggtaa gaagcccact gtcgcccaag ctttgatgat 2340 tgggggtggt gcggttaagg gacagggtaa tttgggtgtt actaatggca aagaactctt 2400 gaaggtatta ggtagctctc gatctatagg gaagatgtca ggtaagatgg ctgtttaaac 2460 cgagtgcgtg tgacgggttt acctctctaa aagtcacacc gtggatacta cgacaagtat 2520 cagtgcttac aggacttatg tctgtggttc acttaaatcg aaccattgga gcaatccaac 2580 gttaatacta cgttaagtat tagtgcttac aggg 2614 //