ID   AY195610; SV 2; linear; genomic RNA; STD; VRL; 1184 BP.
XX
AC   AY195610;
XX
DT   20-FEB-2003 (Rel. 74, Created)
DT   25-JAN-2006 (Rel. 86, Last updated, Version 3)
XX
DE   Sugarcane mosaic virus isolate Mx polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1184
RX   DOI; 10.1007/s00705-005-0645-3.
RX   PUBMED; 16328150.
RA   Espejel F., Jeffers D., Noa-Carrazana J.C., Ruiz-Castro S.,
RA   Silva-Rosales L.;
RT   "Coat protein gene sequence of a Mexican isolate of Sugarcane mosaic virus
RT   and its infectivity in maize and sugarcane plants";
RL   Arch. Virol. 151(2):409-412(2006).
XX
RN   [2]
RP   1-1184
RA   Espejel F., Silva-Rosales L., Jeffers D.;
RT   ;
RL   Submitted (11-DEC-2002) to the INSDC.
RL   Ingenieria Genetica, CINVESTAV, Km. 9.6 Libramiento Norte, Carretera
RL   Irapuato-Leon, Irapuato, GTO 36500, Mexico
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1184
RA   Espejel F., Jeffers D., Noa-Carrazana J.C., Ruiz-Castro S.,
RA   Silva-Rosales L.;
RT   ;
RL   Submitted (29-APR-2005) to the INSDC.
RL   Ingenieria Genetica, CINVESTAV, Km. 9.6 Libramiento Norte, Carretera
RL   Irapuato-Leon, Irapuato, GTO 36500, Mexico
XX
DR   MD5; 5812ec098d0674430defed0f50ada360.
XX
CC   On Apr 29, 2005 this sequence version replaced gi:28436068.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1184
FT                   /organism="Sugarcane mosaic virus"
FT                   /host="maize"
FT                   /isolate="Mx"
FT                   /mol_type="genomic RNA"
FT                   /country="Mexico"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..942
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q80PW8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q80PW8"
FT                   /protein_id="AAO41684.2"
FT                   /translation="SGSVDAGAQGGTSGSGTPTPAAGSGTGTRPPSTGSATQGNTPPAS
FT                   GGSSGNNGGNQSGSNGTGNQAGSNGTGGQRDKDVDAGSTGKISVPKLKAMSKKMRLPKA
FT                   KGKDVLHLDFLLTYKPQQQDISNTRATKEEFDRWYDAIKKEYEIDDTQMTVVMSGLMVW
FT                   CIENGCSPNINGNWTMMDGDEQRVFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNST
FT                   ERYMPRYGLQRNLTDYSLARYAFDFYEMTSRTPARAKEAHMQMKAAAVRGSNTRLFGLD
FT                   GNVGETQENTERHTAGDVSRNMHSLLGVQHHH"
FT   mat_peptide     1..939
FT                   /product="coat protein"
FT                   /note="structural capsid protein"
FT   3'UTR           943..1184
XX
SQ   Sequence 1184 BP; 373 A; 251 C; 291 G; 269 T; 0 other;
     tccggttctg tggatgcagg agctcaagga ggaaccagtg gctcaggaac acccacacct        60
     gcagcgggta gtggaacagg aactagacca ccttcaactg gatcagcaac acaaggaaac       120
     acacctccag catcaggtgg ctcatcggga aataatggag gtaaccaatc aggttcgaac       180
     ggcactggaa atcaagcagg ttccaacgga acagggggcc aaagagacaa agatgttgat       240
     gctggttcaa caggaaaaat atcagtgcca aagcttaagg caatgtcaaa gaaaatgcgc       300
     ctgccaaaag caaaaggaaa agatgttcta cacttagatt tccttttaac atataaacca       360
     caacaacaag acatatcaaa cactagagca accaaggaag agtttgatag atggtatgac       420
     gccataaaga aggagtatga aattgatgat acacaaatga cagttgtcat gagtggtctc       480
     atggtatggt gcattgaaaa tggttgctca ccaaacataa acggaaattg gacgatgatg       540
     gacggagatg aacaaagagt gtttccattg aaaccagtta ttgaaaatgc atctccaact       600
     ttccgacaaa ttatgcatca cttcagtgat gcagctgaag cgtatataga ataccgaaac       660
     tctacagagc gatatatgcc aagatacgga cttcagcgaa atctcaccga ctatagctta       720
     gcacggtatg cttttgattt ctatgaaatg acttcacgca caccagctag agctaaggaa       780
     gcccacatgc agatgaaggc cgcagcagtt cgtggttcca acacacgcct gttcggtctg       840
     gacggaaatg tcggcgagac tcaggagaat acagagagac acacagctgg cgacgttagt       900
     cgcaacatgc actctctgtt gggagtgcag catcaccact agtctcctgg aaaccctgtt       960
     tgcagtacct atagtatgta ctttataatt aatatggtat gtatgtgagg ctttgcctcg      1020
     gtttactatt taattacgta tgtactttaa gtgtgaacca gtctgcagga tacagggttg      1080
     gacccagtgt cttctggtgt agcacgtact agcgtcgagc cacgtcacgg acagcattgg      1140
     ggatggcttt gccatgggtg ctgcgagtgt cttggtaaga gacc                       1184
//