ID   AY193783; SV 1; linear; mRNA; STD; VRL; 1046 BP.
XX
AC   AY193783;
XX
DT   30-JAN-2003 (Rel. 74, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Sugarcane streak mosaic virus polyprotein mRNA, partial cds.
XX
KW   .
XX
OS   Sugarcane streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Poacevirus.
XX
RN   [1]
RP   1-1046
RX   DOI; 10.1007/s00705-003-0015-y.
RX   PUBMED; 12756623.
RA   Hema M., Kirthi N., Sreenivasulu P., Savithri H.S.;
RT   "Development of recombinant coat protein antibody based IC-RT-PCR for
RT   detection and discrimination of sugarcane streak mosaic virus isolates from
RT   Southern India";
RL   Arch. Virol. 148(6):1185-1193(2003).
XX
RN   [2]
RP   1-1046
RA   Hema M., Kirthi N., Savithri H.S.;
RT   "Overexpression of coat protein of sugarcane streak mosaic virus";
RL   Unpublished.
XX
RN   [3]
RP   1-1046
RA   Hema M., Savithri H.S., Sreenivasulu P.;
RT   ;
RL   Submitted (10-DEC-2002) to the INSDC.
RL   Biology, University of Indiana, 3rd Street, Bloomington, IN 47405, USA
XX
DR   MD5; b5ea0334de7d31fd1c133986d3a26e04.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1046
FT                   /organism="Sugarcane streak mosaic virus"
FT                   /isolate="scsmv_ka"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:53954"
FT   CDS             <1..852
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q80PX0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q80PX0"
FT                   /protein_id="AAO25686.1"
FT                   /translation="GQGTQPPQDQSTVASTSSSTSATTTSQAESQTSGNLSNTISQTMK
FT                   SLYVPPLVKSLKTEAKAKQMMRYTPPQALISSSAASIRQFNDWANTAAEGYGKTIQQFT
FT                   DEILPFWIYWCVVNGATEENKTKPKWTKAVFNLDGADGTEITVDENGPQIEFEMGPMYR
FT                   NAKPGIRAIMRHFGELAYKWVQFSVRSGKPIIPHNAVKAGLTTPEFYPCCIDFVMVNIL
FT                   SPAEIDVRNQVINARTPRMGRPLFRHALRAGGDEDTDLRREDDANYGRTQIGGAHFGRA
FT                   QH"
FT   mat_peptide     1..849
FT                   /product="coat protein"
FT   3'UTR           853..1046
XX
SQ   Sequence 1046 BP; 312 A; 239 C; 255 G; 240 T; 0 other;
     ggacaaggaa cgcagccacc tcaggatcaa agtactgtag cttcaacttc atcatcaact        60
     tcagcgacaa ctacaagcca ggctgaaagt caaacatctg gaaatttgtc aaacacgatc       120
     tcccaaacga tgaaatcact gtacgtgcca ccattggtta aatccctcaa gacggaagcc       180
     aaagcaaagc agatgatgag atacacacct ccacaagcat taatctcctc gtcagccgca       240
     tcaatacgac agtttaatga ttgggccaac acagcggccg agggatatgg aaagacaatc       300
     cagcaattca cggatgagat cttacctttt tggatttact ggtgtgttgt caatggggca       360
     actgaagaga acaaaacgaa acccaagtgg acgaaagctg tgtttaactt agacggagca       420
     gatgggacgg aaattaccgt tgatgaaaat gggcctcaaa tagagtttga gatggggcca       480
     atgtacagaa acgctaaacc tggtattcgc gctatcatga gacattttgg cgaattagcg       540
     tataagtggg ttcagttctc ggttcgtagc gggaaaccca taataccaca caatgcagta       600
     aaggcaggat tgaccacacc agagttttat ccttgctgca ttgattttgt gatggtgaac       660
     atcctctcac cagcagaaat tgacgtgcgt aaccaggtga tcaacgcacg cacaccccgg       720
     atgggaaggc ctttattccg tcacgcgctt agagccgggg gagatgagga cacggacctg       780
     cgtagagaag atgatgctaa ttatggaaga acgcagatcg gaggcgccca ctttgggcgt       840
     gctcagcact gattaccagt gcagttatcc atatattatt gtatctacgt ataaaatggt       900
     tctcttggat aggctgatgg tagttgcctg accgcttagt cgatcatcag gagctactgg       960
     tggatcattc ggagattgct caccctgttt tcagaccagt gagattctgc cgaacccaca      1020
     atcaacctgc cccgttagga ggaaaa                                           1046
//