ID   AY189681; SV 1; linear; mRNA; STD; VRL; 1047 BP.
XX
AC   AY189681;
XX
DT   30-JAN-2003 (Rel. 74, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Sugarcane streak mosaic virus isolate ta coat protein mRNA, partial cds.
XX
KW   .
XX
OS   Sugarcane streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Poacevirus.
XX
RN   [1]
RP   1-1047
RX   DOI; 10.1007/s00705-003-0015-y.
RX   PUBMED; 12756623.
RA   Hema M., Kirthi N., Sreenivasulu P., Savithri H.S.;
RT   "Development of recombinant coat protein antibody based IC-RT-PCR for
RT   detection and discrimination of sugarcane streak mosaic virus isolates from
RT   Southern India";
RL   Arch. Virol. 148(6):1185-1193(2003).
XX
RN   [2]
RP   1-1047
RA   Masarapu H., Narayanaswamy K., Savithri S.H.;
RT   "Overexpression of coat protein gene of sugarcane streak mosaic virus";
RL   Unpublished.
XX
RN   [3]
RP   1-1047
RA   Nasarapu H., Savithri S.H., Pothur S.;
RT   ;
RL   Submitted (30-NOV-2002) to the INSDC.
RL   Biology, Indiana University, 3rd Street, Bloomington, IN 47405, USA
XX
DR   MD5; ffa986236d0905a8fc5f8247b3683d35.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1047
FT                   /organism="Sugarcane streak mosaic virus"
FT                   /isolate="ta"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:53954"
FT   CDS             <1..852
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q80PZ2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q80PZ2"
FT                   /protein_id="AAO25634.1"
FT                   /translation="GQGTQPPQDQSTVASTSSSTSATTTSQAESQTSGNLANTISQTMK
FT                   SLYVPPLVKSLKTEAKAKQMMRYTPPQALISSSAASIRQFNDWANTAAEGYGKTIQQFT
FT                   DEILPFWIYWCVVNGATEENKTKPKWTKAVLNLDGADGTEITVDENGPQIEFEMGPMYR
FT                   NAKPGIRAIMRHFGELAYKWVQFSVRSGKPIIPHNAVKAGLTTPEFYPCCIDFVMVNIL
FT                   SPAEIDVRNQVINARTPRMGRPLFRHALRAGGDEDTDLRREDDAHYGRTQIGGAHFGRA
FT                   QH"
FT   3'UTR           853..1047
FT   polyA_site      1044
XX
SQ   Sequence 1047 BP; 312 A; 240 C; 260 G; 235 T; 0 other;
     ggacaaggaa cgcagccacc tcaggatcaa agtactgtag cttcaacttc atcatcaact        60
     tcagcgacaa ctacaagcca ggctgaaagt caaacatctg gaaatttggc aaacacgatc       120
     tcccaaacga tgaaatcact gtacgtgcca ccattggtta aatccctcaa gacggaagcc       180
     aaagcaaagc agatgatgag atacacacct ccacaagcat taatctcctc gtcagccgca       240
     tcaatacgac agtttaatga ttgggccaac acagcggctg agggatatgg aaagacaatc       300
     cagcaattca cggatgagat cttacctttt tggatttact ggtgtgttgt caatggggca       360
     actgaagaga acaaaacgaa accaaagtgg acgaaagcgg tgcttaactt agacggagca       420
     gatgggacgg aaattaccgt tgatgaaaat gggcctcaga tagagtttga gatggggcca       480
     atgtacagaa acgctaaacc tggtattcgc gctatcatga gacattttgg cgaattggcg       540
     tataagtggg ttcagttctc ggttcgtagc gggaaaccca taataccaca caatgcagta       600
     aaggcaggat tgaccacacc agagttttat ccttgctgca ttgattttgt gatggtgaac       660
     atcctctcac cagcagaaat tgacgtgcgt aaccaggtga tcaacgcacg cacaccccgg       720
     atgggaaggc ctttattccg tcacgcgctt agagccgggg gagatgagga cacggacctg       780
     cgtagagaag atgatgcaca ttatggaaga acgcagatcg gaggcgccca ctttgggcgt       840
     gctcagcact gattaccagt gcagttatcc atatattatt gtatctacgt ataaaatggt       900
     tctcttggat aggctgatgg tagtcgcctg accgcttagt cgatcatcag gagctactag       960
     tggatcattc ggagattgct caccctgttt tcagaccagt gagattctgc cggaacccac      1020
     aatcaacctg ccccgtgagg aggaaaa                                          1047
//