ID AY186789; SV 2; linear; genomic RNA; STD; VRL; 3514 BP. XX AC AY186789; XX DT 04-FEB-2003 (Rel. 74, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 4) XX DE Rice stripe virus isolate HZ segment 2 gene, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-3514 RA Wei T., Lin H., Lin Q., Wu Z., Xie L.; RT "Analysis of genetic diversity of rice stripe virus in the NS2 gene"; RL Unpublished. XX RN [2] RP 1-3514 RA Wei T.Y., Lin H.X., Xie L.H.; RT ; RL Submitted (23-NOV-2002) to the INSDC. RL Plant Protection, The Institute of Plant, Jinshan, Fuzhou, Fujian 350002, RL China XX RN [3] RC Sequence update by submitter RP 1-3514 RA Wei T.Y., Lin H.X., Xie L.H.; RT ; RL Submitted (14-MAY-2003) to the INSDC. RL Plant Protection, The Institute of Plant, Jinshan, Fuzhou, Fujian 350002, RL China XX DR MD5; 8cc8fe9457babfcd1c6bee53524dd1b3. XX CC On May 14, 2003 this sequence version replaced AY186789.1. XX FH Key Location/Qualifiers FH FT source 1..3514 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA2" FT /isolate="HZ" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052763" FT CDS 81..680 FT /codon_start=1 FT /product="NS2 protein" FT /note="putative movement protein" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:Q808A1" FT /protein_id="AAO31606.2" FT /translation="MALLLFNDHYYGFLHKYKRHTGSYDNLFNLRCSKEDHYLNSLDAI FT WLMGCCEEFTDPALRAHALAIATGSNIGLVNNNAVISDERLKCWLCKKPSHQQTEHLKL FT ILLPNLVNGFQFATESYHICLKDHSGDDPTQYLSEFSFPTGLRAYYKPHQKMEHKHIVV FT TNGIPISKNFNEIALPDPSPSEDYVLVGAHECPILM" FT CDS complement(980..3484) FT /codon_start=1 FT /product="NSvc2 protein" FT /note="membrane glycoprotein" FT /db_xref="GOA:Q809B5" FT /db_xref="InterPro:IPR009547" FT /db_xref="UniProtKB/TrEMBL:Q809B5" FT /protein_id="AAO31607.1" FT /translation="MHFKSYFIYTTIFNMAWGAPIPFPDTHSWMRNREREASEIVKVPC FT SARAPPCKLTYELNGYFIENGLICYNRASVNYFETCYTGNYDYKLPLHPSFSKFGGHVY FT ISCHDATLQNVSLVGIQQTEYTSSPLLITNSNSEKISYSNLKTGFLGIVYAVEDRACIQ FT PAQAKKPEEIINHGVAIKPSCTDGVLYYINSSCEVNVSDQTFSIPSCESVKLPTYDDTI FT EVCDKGGCQNVTCHPGEICDKYERMDMIMRIKNYQCSHIYRYSLYSIILFFVIVIVFTL FT ITIMNILFFLKPAFWLLKKVLYSMVGLCHRRPVVDEVSVDMSTVRVVDEAEEGLLVVED FT SIAPNTNVSDKVKRNGRKVENGMIFIPYVLMILLLVCSAESCQDLVSSISNIERCTNNS FT CDFISKMKLTLLNTPQDFCFKTSTDVYKIRFNSVRVMCLSVPLYYTNSFKRVISREEWK FT CFEGEGCRTDGTHSIWGESTSLSFDYCVTDFHIFSYCPAYHYNWKRIEYEPTSSRACTI FT MKCMDTKFEIVGYIQKNGHVLKELGGITSKYDSPLVSISLSNYNSARMPREYAECDGKA FT YLRTANDLGSFDKELLGNIQCPTKEDAVVLSSKCKTKILSNEDLPVIRYVERDGVDMLE FT HVKSEPLKDVLVSSSGISLGTLDLFPVELNLQFKEAITSIITSKISLNGTSCKITGIER FT KFKKTTVSIESSNKVYLSDILACEGLAVCPMILNNIKKGTCITTTYYSVTVGSMIKCKF FT IYSGDTLMCKYDVSPLEITVISPSLDVSSFEAVKTSTTNWMELLAGIVKDNPKLSLVAS FT IIPIGLILKTIRSFLDDIRQVD" XX SQ Sequence 3514 BP; 1071 A; 740 C; 628 G; 1075 T; 0 other; acacaaagtc ctgggtatat aagccacata tatcatataa atctaacaga aatcgtccac 60 ggagaatctc gtcttcagca atggcattac tccttttcaa tgatcactac tatggttttc 120 tccataagta taaaagacat actggatcat atgataatct cttcaatttg aggtgctcta 180 aagaagacca ctatttgaac tctcttgatg ccatctggct catgggatgc tgtgaggagt 240 tcacagatcc agctcttaga gcacatgctc tcgccatagc aactggatct aacataggtt 300 tagttaacaa taatgctgtg atatctgatg agaggctgaa atgctggctc tgtaaaaaac 360 catctcatca acagactgag catctgaaac tgatcctgtt acccaacttg gtcaacgggt 420 ttcagtttgc tacagagtca tatcacattt gcctgaagga tcactctgga gatgacccta 480 cacaatatct tagtgagttc tcctttccca caggattaag agcctactac aagccacatc 540 agaagatgga gcataaacat atagttgtaa ccaatggaat acccatctca aagaatttca 600 acgaaattgc tctccctgac ccatctccta gtgaagacta tgtcttggtt ggagcacatg 660 agtgccctat tctaatgtga acttggaaga tgatattgac tgtggcctac aggcacatac 720 acacactggc cacaaacact acaatggtgc tatgcatcaa tttataatct tatatcctcg 780 aaatggtgct acgcaccaca tccggatggt gagcctagct cactttgatt attgagtaaa 840 ttaatgaaaa caaacaagta taattgtaac tataatagct ttcttattat tatgtaatca 900 agacacttaa aactacacac ttaagcttaa gggaagatta ttaatagaaa tatgggcata 960 catgagtgaa cctattggct taatccacct gtctgatgtc atctagaaaa ctcctaatgg 1020 tcttcaaaat gagtcctatt ggtattattg aagctactag agataacttt gggttgtcct 1080 tgactatccc ggctagcaat tccatccaat tggtggtgct ggtcttcaca gcttcaaaag 1140 agctcacatc aaggctcggc gatatcacgg tgatttccaa tggtgaaaca tcatacttgc 1200 acatgagagt atcaccggag tatatgaatt tgcatttgat catggaacca actgtgaccg 1260 aatagtaagt tgttgttatg catgttcctt ttttaatgtt gttcaatatc atagggcaaa 1320 ctgccaatcc ttcgcaggcc aagatatcac tgagatagac tttgtttgaa gattcaatgc 1380 ttacagttgt cttcttaaat ttcctctcta ttccagtgat cttgcatgag gtcccattga 1440 gagatatctt actagttatt atactggtga tcgcttcctt gaattgcaag ttcagctcta 1500 ctgggaatag atccaaagtg cccagagata taccagagct agagaccaac acatccttta 1560 agggttcact tttcacatgc tctagcatat ccactccatc cctctctaca tacctaataa 1620 ctggcaaatc ttcatttgaa agtatcttag ttttacactt actgctaaga acaacagcat 1680 cttctttagt tggacactgt atgttgccta gtaactcctt gtcaaaagac cctaaatcat 1740 ttgcggtcct taaataagct ttcccatcgc actctgcata ttctctaggc attctggcac 1800 tattatagtt tgacaatgat atggaaacta aagggctatc atacttacta gtaatgcctc 1860 ctagttcttt caacacatgc ccattttttt gaatataccc aactatttca aacttagtat 1920 ccatgcactt cataatggtg catgctcttg aagatgttgg ttcatattct attctcttcc 1980 aattgtagtg gtatgctggg caatatgaaa agatgtggaa atcagtgaca caataatcaa 2040 agctcagact agtggattcc ccccatatcg agtgtgttcc atcagttctg caaccttccc 2100 cttcaaaaca tttccattcc tctctagaga tcaccctttt gaaactgttg gtataataca 2160 gaggcactga taagcacata acccgaacac tattaaatcg tatcttgtag acatcagtcg 2220 atgtcttgaa gcagaaatcc tgaggagtgt tcagtagggt caatttcatt ttagagatga 2280 agtcacaact attatttgtg cacctctcta tattggaaat gcttgaaaca aggtcttgac 2340 aggattctgc agaacaaact aatagtaaga tcatcaatac atatggtatg aatatcattc 2400 cattctctac ttttctaccg ttccttttta ctttatcaga aacattagtg ttaggagcaa 2460 tggagtcttc tacaactaat aggccctcct ctgcttcatc cactactcta actgttgaca 2520 tatctacaga cacttcatct acaacaggtc tcctatgaca tagtccaacc attgaatata 2580 gtaccttttt tagcagccaa aatgcaggtt ttaggaaaaa taagatattc attatggtga 2640 tgagagtgaa tactatcact ataacaaaaa acaagattat agagtacaat gaatatctat 2700 agatgtggga gcattgataa ttctttattc tcattatcat gtccattctc tcatacttgt 2760 cacaaatctc tcctgggtga caagttacat tttgacaacc acccttatca caaacttcaa 2820 tagtatcatc ataagttgga agtttgactg attcacaaga agggatggaa aatgtttggt 2880 cactcacatt gacctcacat gaagaattga tataatacag cacaccatct gtgcaagagg 2940 gcttgattgc aacaccatga tttatgattt cttcaggttt cttagcttgt gcaggttgaa 3000 tgcatgccct atcctcaaca gcatacacta ttcccaagaa accagttttg agatttgagt 3060 atgaaatctt ttcagaattg gaattagtta tcaatagagg gcttgatgtg tattctgttt 3120 gctgtatgcc aaccagagac acattctgca gggtagcatc atggcaactg atatagacgt 3180 gaccaccgaa cttagagaaa gaaggatgga gaggcagctt gtaatcgtag tttccagtgt 3240 agcatgtctc aaagtaattc acactagccc tattgtaaca aatcagacca ttttcaatga 3300 aatatccatt cagctcataa gtcaatttgc agggaggggc tctggcactg caagggacct 3360 tgacaatctc agatgcttcc ctctccctgt tcctcatcca agaatgggtg tcagggaaag 3420 gtattggtgc accccacgcc atattaaaga ttgtggtgta gatgaaatat gatttaaaat 3480 gcatcttcaa agaagttata cccagacttt gtgt 3514 //