ID AY186788; SV 1; linear; genomic RNA; STD; VRL; 8970 BP. XX AC AY186788; XX DT 04-FEB-2003 (Rel. 74, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Rice stripe virus isolate HZ segment 1 gene, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-8970 RA Wei T.Y., Lin H.X., Xie L.H.; RT ; RL Submitted (23-NOV-2002) to the INSDC. RL Plant Protection, The Institute of Plant, Jinshan, Fuzhou, Fujian 350002, RL China XX DR MD5; 1c8e187e386a99dc879256d95b2c4351. XX FH Key Location/Qualifiers FH FT source 1..8970 FT /organism="Tenuivirus oryzaclavatae" FT /segment="1" FT /isolate="HZ" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052763" FT CDS 58..8817 FT /codon_start=1 FT /product="RNA polymerase" FT /db_xref="GOA:Q80A74" FT /db_xref="InterPro:IPR003323" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR015842" FT /db_xref="InterPro:IPR022531" FT /db_xref="InterPro:IPR029124" FT /db_xref="UniProtKB/TrEMBL:Q80A74" FT /protein_id="AAO31605.1" FT /translation="MTTPPLVIPLHVHGRSYELLAGYHEVDWQEIEELEETDVRGDGFC FT LYHSILYSMGLSKENSRTTEFMIKLRSNPAICQLDQEMQLSLMKQLDPNDSSAWGEDIA FT IGFIAIILRIKIIAYQTVDGKLFKTIYGAEFESTIRIRNYGNYHFKSLETDFDHKVKLR FT SKIEEFLRMPVEDCESISLWHSSVYKPIVSDSLSGHKSFSNVDELIGSIISSMYKIMDN FT GDQCFLWSAMRMIARPSEKLYALAVFLGFNLKFYHVRKRAEKLTAKLESDHTNLGVKLI FT EVYEVSEPTRSTWVLKPGGSRITETRNFVIEEIIDNRRSLESLFVSSSNYPAELCSQKL FT SAIKDRIALMFGFINRTPENSGRELYINTYYLKRILQVERNVIRDSLRSQPAVGMIQII FT RLPTAFGTYNPEVGTRLLAQTGLIYRLGTTTRVQMEVRRSPSVISRSHKITSFPETQKH FT NNNLYDYAPRTQETFYHPNAEIYEAVDVKTPSVITEIVDNHIVIKLNTDDKGWSVSDSI FT KQDFVYRKRLMDAKNIVHDFVFDILSTETDKSFKGADLSIGGISDNWSPDVIISRESDP FT QYEDIVVYEFTTRSTESIESLLRSVEVKSLRYKEAIQERAITLKKRISYYTICVSLDAV FT ATNLLSLPADVCRELIIRLRVANQVKIQLADNDINLDSATLLAPDIYRIKEMFRESFPN FT NKFIHPITKEMYEHFVNPMISGEKDYVANLKSIIDKETRDEQRKNLESLKVVDGKKYTE FT RKAETALNEMSQAEEHYRSYFENDNFRSALKAPVQLPLIIPDVSSQDNQFPNKELSDRI FT RKKPIDHPIYNIWDQAVNKRNCSIALGHLDELEISMLEGQVAKKVEESYKKDRSQYNRT FT TLLTNMKEDIYLAERGINAKKRLEEPDVKFYRDQSKRPFHPFVSETRDIEQFTQKECLE FT LNEESGHCSLINVEDLVLSALELHEVGDLEHLWNNIKAHSKTKFALYAKFISDLATELA FT ISLSQNCKEDTYVVKKLRDFSCYVLIKPVNLKSNVFFSLYIPSNIYKSHNTTFKTLIGS FT PESGYMTDFVSANVSKLVNWVRCEAMMLAPRGFWREFYAVAPSIEEQDGMAEPDSVCQM FT MSWTLLILLNDKHQLEEMITVSRFVHMEGFVTFPAWPKPYKMFDKLSVTPRSRLECLVI FT KRLIMLMKHYSENPIKFMIEDEKKKWFGFKNMFLLDCNGKLADLSDQDQMLNLFYLGYL FT KNKDEEVEDNGMGQLLTKILGFESAMPKTRDFLGMKDPEYGTIKKHEFSISYVKDLCDK FT FLDRLKKTHGIKDPITYLGDKIAKFLSTQFIETMASLKASSNFSEDYYLYTPSRRLKNQ FT EQSRSKHVIDAGGNISASVKGKLYHRSKVIEKLTTLIKDETPGKELKIVVDLLPKAMEV FT LNKNECMHICIFKKNQHGGLREIYVLNIFERIMQKTVEDFSRAILECCPSETMTSPKNK FT FRIPELHNMEARKTLKNEYMTISTSDDASKWNQGHYVSKFMCMLLRLTPTYYHGFLVRA FT LQLWHHKKIFLGDQLLQLFNQNATLNTMDTTLMKVFQAYKGEIQVPWMKAGRSYIETET FT GMMQGILHYTSSLFHAIFLDQLAEECRRDINRAIKTINNKENEKVSCIVNNMESSDDSS FT FIISIPNFKENEAAQLYLLCVVNSWFRKKEKLGTYLGIYKSPKSTTQTLFVMEFNSEFF FT FSGDVHRPTFRWVNAAVLIGEQETLSGIQEELSNTLKDVIEGGGTYALTFIVQVAQAMI FT HYRMLGSSASSVWPAYETLLKNSYDPALGFFLMDNPKCAGLLGFNYNVWIACTTTPLGE FT KYHEMIQEEMKAESQSLKSVTEDTINTGLVSRTTMVGFGNKKRWMKLMTTLNLSADVYE FT KIEEEPRVYFFHAATAEQIIQKIAIKMKSPGVIQSLSKGNMLARKIASSVFFISRHIVF FT TMSAYYDADPETRKTSLLKELINSSKIPQRHDYLQEPHTLKPTKVEVDEDSWEFKSAKE FT ECIRVLKQRINIHTGREERSISLLFENMAKSMIGRCTDQYDVRENVSILACALKMNYSI FT FKKDAAPNRYLLDEKNLVYPLIGKEVSVYVKSDKVHIEISEKKERLSTKLFNIDKMKDI FT EETLSLLFPSYGDYLSLKETIDQVTFQSAIHKVNERRRVRADVHLTGTEGFSKLPMYTA FT AVWAWFDVKTIPAHDSIYRTIWKVYKEQYSWLSDTLKETVEKGPFKTVQGVVNSISRAG FT VRSRVVHLVGSFGKNVRGSINLVTAIKDNFSNGLVFKGNIFDIKAKKTRESLDNYLSIC FT TTLSQAPITKHDKNQILRSLFVSGPRIQYVSSQFGSRRNRMSILQEVVADDPTLHWPDQ FT DTSQKQLEDKFRELAHKELPFLTEKVFHDYLEKIEQLMKENTHLGGRDVDASKTPYVLA FT RANDIEIHCYELWREYDEDEDEAYQAYCSEVEAAMDQEKLNALIERYHVDPKANWIQML FT MNGEIETVEELNKLDKGFESHRLALVERIRVGKLGILGSYTKCQQRIEELDGEGNKTHR FT YTGEGIWRGSFDDSDVCIVVQDLKKTRESYLKCVVFSKVSDFKVLMGHLKTWCREHHIS FT NDEFPTCTQKELLSYGVTKSSVLLYKMNGMKMLRNMEKGIPLYWNPSLSTRSQTYINWL FT AVDITDHSLRLRNRTVENGRVVNQTIMVVPLYKTDVQIFKTSPVDLEQDVQNDRLKLLS FT VTKAGELRWLQDWIMWRSSAVDDLNILNQVRRNKAARDHFNAKPEFKKWIKELWDYALD FT TTLINKKVFITTQGSESQSTVSSGDSDSAVAPLTDEAVDEIHDLLDKELEKGTLKQIIH FT DATIDAQLDIPAIESFLAEEMEVFKSSLAKSHPLLLNYVRYMIQEIGVTNFRSLIDSFN FT QKDPLKSVSLSILDLKEVFKFVYQDINDAYFVKQEEDHKFDF" XX SQ Sequence 8970 BP; 3066 A; 1526 C; 1982 G; 2396 T; 0 other; acacatagtc agaggaaaaa ataattttga ttttgttttc cacaaaagaa ttgaaggatg 60 acgacaccac ctctcgttat acccttgcat gttcatggca ggtcctatga actgttggcg 120 gggtatcatg aagttgattg gcaggagata gaagagttgg aagaaacaga tgttagaggt 180 gatggatttt gtctttatca ttcaatacta tatagtatgg gcctgagcaa ggagaactct 240 cgcaccactg aatttatgat aaagctacga tcaaatccag ctatctgcca gctggatcaa 300 gaaatgcaac tgagccttat gaagcagctt gatccaaatg actcatcagc ctggggtgaa 360 gatatagcaa ttgggtttat agctataata ttgagaatta agataattgc ttaccagaca 420 gttgatggga agttgtttaa gactatttat ggtgctgagt ttgagagtac tattagaatc 480 aggaactatg ggaattacca tttcaagtca cttgagacag attttgacca taaagtgaag 540 ctcagatcaa aaattgaaga attcttgaga atgccagtgg aggactgtga atccatatcc 600 ttgtggcatt catctgttta caagcctata gtatctgata gcctttctgg acacaagagc 660 tttagtaatg tggatgaatt gataggtagt ataatatcca gcatgtataa gatcatggac 720 aatggtgatc aatgctttct ttggagtgca atgagaatga tagccagacc ctctgaaaaa 780 ctatatgccc ttgcggtgtt tttgggattc aatcttaagt tctatcatgt gaggaaaaga 840 gctgagaaat tgacagcaaa acttgagagt gatcatacta atttgggagt gaaactgatt 900 gaggtgtatg aagtttctga gccaaccaga tctacctggg tcctgaaacc aggagggagc 960 agaataactg agacaagaaa ttttgtgatt gaggagatca tagataacag gcgctctctg 1020 gagagcttgt ttgtgtcaag cagtaactat cctgcagagt tatgttccca gaaacttagt 1080 gccatcaagg acagaatagc actaatgttt ggctttatca acagaacccc tgaaaacagt 1140 gggagagaac tctacataaa cacatactat ctgaagagaa tattacaggt ggaaagaaat 1200 gtaattagag attctttgag atcacagcct gctgtgggga tgatccagat aatcagatta 1260 ccaacagcat ttggtacata caacccggaa gtgggcactc gtttgttggc ccaaactgga 1320 ctaatctata gacttggcac cacaactaga gtgcagatgg aggtcaggag atctccctct 1380 gtcatttcaa gatcccataa gatcactagt tttccggaga cacagaaaca caacaacaat 1440 ttgtatgatt atgcacccag aacacaggag acattttatc acccaaatgc tgagatctat 1500 gaagctgttg atgtaaagac tcctagtgtc atcacagaga ttgttgataa tcatatagtg 1560 ataaaattga acactgatga taagggttgg tcagtcagtg actcgataaa gcaagatttt 1620 gtatatcgga agagactaat ggatgcaaag aatattgtcc atgactttgt ttttgatatc 1680 ttatcaaccg agactgacaa gagctttaag ggtgctgact tatctatagg aggaatctca 1740 gataactggt caccagatgt cattatatca agagaaagtg atccacagta tgaagatatc 1800 gttgtctatg agtttacaac aaggtccact gagtctatag agtctctact gagatcagta 1860 gaggttaaaa gcttacgata taaagaagca attcaggaaa gagccatcac attaaagaag 1920 aggatatctt attacactat atgtgtcagt ctagatgctg tagccacaaa tctgctatca 1980 cttcctgctg atgtctgcag agaactaata attcgattaa gagttgctaa tcaggtgaag 2040 atccagctag ctgataacga catcaatcta gactctgcca ctttgctggc acctgacatt 2100 tacagaataa aggaaatgtt tagggaaagt ttcccaaata ataaatttat acatcctatc 2160 actaaggaaa tgtatgagca ttttgtcaat ccaatgattt caggagagaa agactatgtt 2220 gccaatttga agagcataat agacaaagag accagagatg agcagagaaa gaacttagag 2280 agtctgaaag ttgtggatgg gaaaaagtac acagagagaa aagcagaaac tgctctgaat 2340 gagatgtcac aagcagaaga gcattataga agctattttg aaaatgacaa ttttaggtcc 2400 gcactaaaag ctccagtcca acttccctta atcataccgg atgtgtcaag tcaagacaat 2460 caattcccaa acaaggaact atctgatagg atacggaaga agccgatcga ccaccctatt 2520 tacaacatct gggatcaagc agttaataag agaaattgct cgattgcact cggccattta 2580 gacgagctag aaatatctat gctagaagga caagtagcta agaaagtgga ggaatcttat 2640 aagaaagata ggagtcagta caacaggaca actttgctaa ctaatatgaa ggaggacatt 2700 tacttggctg agagggggat aaatgctaag aagaggttag aagaaccaga tgtgaaattt 2760 tatcgagatc agtctaagag gccttttcat ccttttgtga gtgaaaccag agacatagag 2820 cagttcaccc agaaagagtg cctggagctt aatgaagagt cagggcactg ctcgctgata 2880 aatgtagagg atctagtgtt atctgctcta gagttgcatg aggtaggtga tttagagcac 2940 ttatggaata acataaaagc tcactctaaa acaaagtttg cattatatgc taagtttatc 3000 tctgatcttg ccaccgagct agctatctca ttgtcccaga actgcaaaga agacacctat 3060 gtggttaaga aactcagaga ttttagctgc tacgtactca ttaaaccagt aaacttaaag 3120 agtaatgtgt tcttctcctt atacatacct tccaacattt ataagtcaca caacacaact 3180 ttcaagactc tgataggcag tccagaatca gggtatatga ctgatttcgt ctctgctaat 3240 gtgagcaagt tagtgaactg ggttagatgt gaagctatga tgctagcacc aagaggtttc 3300 tggcgagaat tttatgctgt ggctcctagt attgaggaac aagatggaat ggcggagcca 3360 gattcagtat gtcaaatgat gagttggaca ctcctcatac tactgaacga caagcaccag 3420 ttagaagaga tgatcacagt gtctaggttt gttcatatgg aaggctttgt aacttttcct 3480 gcatggccta aaccttataa aatgtttgat aaactatcag taactccgag gtctaggtta 3540 gaatgtctag tcataaagag gctcattatg ctaatgaagc attactcaga gaatcccata 3600 aaattcatga tagaagatga gaagaaaaag tggtttggat ttaagaatat gttcttgctt 3660 gattgtaatg gtaaacttgc tgatctatct gatcaggatc aaatgcttaa tctcttctat 3720 cttggttatc taaagaacaa agatgaggag gtcgaagaca atggcatggg tcaactattg 3780 actaaaattc tgggctttga gagtgccatg ccaaaaacaa gagacttctt gggtatgaaa 3840 gatcctgagt atggtacaat caagaagcat gagttctcca taagctatgt gaaggacctc 3900 tgtgataaat tcttagacag attaaaaaag acacacggaa tcaaagatcc aatcacttat 3960 ttgggcgaca agatagctaa attccttagc actcagttta tcgagacaat ggcatctttg 4020 aaggcatcat ctaacttctc agaagattac tatttataca cacccagtag aagactaaaa 4080 aaccaggagc aatctagaag taaacatgtg atagacgccg gtggaaatat atctgctagt 4140 gtcaaaggta agctgtatca tagaagcaaa gtaattgaga agctcacaac cctaattaaa 4200 gacgaaacac caggaaaaga actgaaaata gtggtagatc tcttaccgaa ggctatggaa 4260 gtcctaaaca aaaatgaatg tatgcacatt tgtattttta agaagaatca gcatggtggc 4320 cttagagaga tatatgttct taatatcttt gaaagaataa tgcagaagac agtggaagat 4380 ttctctagag ccattctaga atgctgtcct agtgagacta tgacatcccc gaaaaacaag 4440 tttagaatac ctgaattgca caacatggaa gcaaggaaaa ctctaaaaaa tgagtatatg 4500 acaatatcta ctagtgatga tgcatcgaaa tggaatcaag gtcactatgt atctaaattt 4560 atgtgtatgc tattgaggct cactccaact tattatcatg gcttcttagt tcgggctctt 4620 caactatggc atcataagaa gatattccta ggagaccagc tgttgcaact atttaatcaa 4680 aatgctacgc taaataccat ggacacaacc ctcatgaaag tctttcaagc ctacaaaggg 4740 gagattcaag tgccttggat gaaggcaggt agatcctaca tagagactga gacaggtatg 4800 atgcagggaa ttctccacta tactagctct ctgttccatg ctatcttctt ggaccaactg 4860 gctgaagagt gtagaagaga tataaataga gcaattaaga caataaataa taaagaaaat 4920 gagaaggtgt catgtatagt gaacaatatg gaaagttctg acgatagtag cttcattatt 4980 agtattccca atttcaaaga gaatgaagca gcacaattgt acctgctctg tgtggttaac 5040 tcttggttca gaaagaaaga gaagcttgga acttatcttg gaatatataa atctccaaag 5100 agcacaactc agacattatt tgtgatggaa ttcaactcag aattcttctt ttctggtgat 5160 gttcataggc caacttttag gtgggtcaat gcagcagtgc taataggaga gcaagagaca 5220 ttgtctggta tacaggaaga gttgtcaaat acattgaagg atgtaataga aggaggagga 5280 acatacgccc tcacttttat agtgcaagtt gctcaagcta tgatacacta tagaatgctg 5340 ggcagtagtg cttcatcagt gtggccagca tatgaaactc ttctgaaaaa ctcatatgat 5400 cctgcacttg gtttcttcct aatggataat cctaaatgtg ctggcttgtt gggattcaac 5460 tacaatgttt ggattgcctg tacgacgaca ccgttgggag agaagtatca tgaaatgata 5520 caagaagaaa tgaaggcaga gtctcagagc ttaaaatcag taacagaaga tacaattaac 5580 acgggattag tttcacgaac aactatggtg ggctttggaa acaagaaaag gtggatgaag 5640 ctcatgacta cactgaatct gagcgcagat gtatatgaaa agatagaaga ggagccaaga 5700 gtgtactttt tccacgcagc aacagctgaa caaatcattc agaaaattgc tattaaaatg 5760 aagagtcccg gtgtaataca gtcactgtct aaaggaaaca tgctggcaag gaagatagcg 5820 tccagtgtat tcttcatatc tagacatata gtcttcacaa tgtcagctta ctatgatgca 5880 gaccctgaga caaggaaaac atcactgctg aaagaattga tcaacagctc taaaatacct 5940 cagagacatg actatctgca ggaaccgcat acattgaagc cgactaaagt tgaagttgat 6000 gaagatagct gggaattcaa gtcagcaaaa gaggaatgca ttagagtgct aaagcaaaga 6060 atcaatatac acactgggag agaagagaga tctattagcc ttttgtttga aaatatggct 6120 aagtcaatga ttgggaggtg cacggaccag tatgatgtca gagaaaatgt ttcgattcta 6180 gcatgtgcat tgaaaatgaa ctattcaata ttcaagaagg atgctgcacc caataggtat 6240 ctccttgatg agaagaacct tgtttaccca ctgataggaa aggaagtatc tgtttatgtt 6300 aagtctgaca aagtgcatat tgaaatatct gagaagaaag aaagactatc aaccaaatta 6360 tttaatatag ataaaatgaa ggatatagaa gagactctct cactactatt tcctagttat 6420 ggagattacc tatcattaaa agaaacaatt gaccaggtta ctttccaatc tgccatacac 6480 aaagttaacg agagaagaag agttagggcg gatgtgcatt taacagggac agaaggattt 6540 tctaaattgc caatgtatac agcagctgtc tgggcctggt ttgatgtgaa gactattcct 6600 gcacatgaca gcatttatag aactatctgg aaagtctaca aagaacaata ctcctggttg 6660 tcagatacac tgaaagagac agtggagaag ggaccattca aaacagtaca aggtgtggtc 6720 aactccattt caagagctgg cgtgagatcg agagtcgtcc atttagtagg gtcatttggt 6780 aagaatgtta ggggtagcat aaatctggtg acggcaataa aagataactt tagcaatgga 6840 ctagttttca aagggaatat attcgatatc aaagcaaaga agactagaga aagtttggat 6900 aactacttgt caatctgcac cactctgtct caggcaccta tcactaagca tgataagaac 6960 cagattttgc gctctctttt cgtcagtggt ccaagaatcc agtatgtgtc atcacagttt 7020 gggtcaagaa ggaacaggat gtcaatatta caagaagtcg tagcagatga tccaactcta 7080 cattggcctg accaagacac aagtcagaaa cagctggaag acaaatttag agaactagca 7140 cacaaggagc ttccatttct aacagagaag gtatttcacg actatctgga aaaaatagag 7200 cagctaatga aggagaacac tcatctaggt ggtagggatg ttgatgctag caaaacccca 7260 tatgttcttg caagagcaaa tgatattgaa atacattgtt atgagttgtg gagagagtat 7320 gatgaggatg aagatgaagc ataccaggct tattgcagtg aagtggaggc tgctatggat 7380 caagagaaac ttaatgctct gatagagaga taccatgtag accctaaagc aaactggatc 7440 caaatgttaa tgaatggtga gattgaaaca gttgaagagt tgaataagct tgacaagggg 7500 tttgagagcc acagacttgc tctagtcgaa agaattaggg tagggaaact tggaatctta 7560 ggcagttaca ccaagtgtca acagagaata gaggagctag atggtgaagg taataagact 7620 catagataca caggagaagg tatatggagg ggttcattcg atgattccga tgtttgcata 7680 gttgtccaag acctaaagaa gactagagag agttacttaa aatgtgtcgt tttttccaaa 7740 gtgtctgatt ttaaagtcct gatgggccat ctgaagacat ggtgcaggga acaccatatt 7800 agtaatgatg agtttcctac ctgtactcag aaagagcttt taagctatgg tgtcacaaag 7860 agttcagttc tattgtacaa gatgaatgga atgaaaatgt tgaggaacat ggaaaaaggt 7920 attcctctgt actggaatcc tagcttgtca actagaagcc aaacttatat caactggctt 7980 gctgttgata ttacagatca tagcttacgg ctcaggaaca gaactgttga gaatgggaga 8040 gttgtaaatc aaacgatcat ggttgtccct ctgtataaaa ctgatgtgca gatattcaaa 8100 acatctcctg tagatcttga gcaagatgtg cagaatgata gacttaagct attatcagtg 8160 acgaaagccg gggagttgag atggcttcaa gattggataa tgtggagatc atctgctgtg 8220 gatgatttga atatactaaa ccaggttaga agaaataagg ctgcaaggga tcattttaat 8280 gctaaaccag agttcaaaaa atggataaaa gagctgtggg actatgcact tgacaccaca 8340 ctaatcaaca agaaggtctt cataactaca caaggatcag agtcacagag cacagtttct 8400 tctggagata gcgacagtgc agtggcacct ttaactgatg aggcagtgga tgagattcat 8460 gatctcttgg acaaagagtt agaaaagggc accttaaaac agatcatcca tgatgcaacc 8520 atcgatgccc agttagatat ccctgctata gagagcttcc tggctgaaga aatggaggtc 8580 ttcaagagta gcttagccaa gagccaccct cttcttctaa attatgtcag gtacatgatt 8640 caagagatag gtgtgaccaa cttcagatca ttgattgata gctttaatca gaaagatccc 8700 ttgaaaagtg tgtctctaag catcttagac ttgaaagaag tgttcaagtt tgtgtaccag 8760 gacataaatg atgcctattt tgttaaacag gaagaagacc ataagttcga tttctgagaa 8820 gtcctcttca acaaagggac tgcagcacaa acacaagtcc agacaccatt gaaatccata 8880 caaatatttc acgttttatc ccttatgact tagattttca ataattaatt atataaacaa 8940 aaacattttg ttttcctctg gactttgtgt 8970 //