ID AY157994; SV 1; linear; genomic RNA; STD; VRL; 4633 BP. XX AC AY157994; XX DT 25-NOV-2002 (Rel. 73, Created) DT 26-MAR-2004 (Rel. 79, Last updated, Version 4) XX DE Tomato black ring virus isolate MJ segment RNA-2, complete sequence. XX KW . XX OS Tomato black ring virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-4633 RX DOI; 10.1007/s00705-003-0261-z. RX PUBMED; 15045566. RA Jonczyk M., Le Gall O., Palucha A., Borodynko N., Pospieszny H.; RT "Cloning and sequencing of full-length cDNAs of RNA1 and RNA2 of a Tomato RT black ring virus isolate from Poland"; RL Arch. Virol. 149(4):799-807(2004). XX RN [2] RP 1-4633 RA Jonczyk M., Palucha A., Pospieszny H.; RT ; RL Submitted (02-OCT-2002) to the INSDC. RL Virology and Bacteriology, Institute of Plant Protection, Miczurina 20, RL Poznan 60-318, Poland XX DR MD5; 89fd20de7dc8c7286917289b5017b47f. DR EuropePMC; PMC3314827; 22218961. XX FH Key Location/Qualifiers FH FT source 1..4633 FT /organism="Tomato black ring virus" FT /segment="RNA-2" FT /isolate="MJ" FT /mol_type="genomic RNA" FT /db_xref="taxon:12275" FT gene 276..4307 FT /gene="P2" FT CDS 276..4307 FT /codon_start=1 FT /gene="P2" FT /product="polyprotein" FT /db_xref="GOA:Q8B8X2" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8B8X2" FT /protein_id="AAN72831.1" FT /translation="MGFKELFSSSLGDAARAKVSLVRGMSGWLDTTLATVQAAGPEIRN FT YAYSALWAEVDSVKELMPVTPAMLCAQLRKELWCDQKRTQRCAPSSTSCFCKCGGMPLP FT PSIEWVDEEVIIENCPSGRNLCHNGVRCIRHHGPGVALERVQVLVEAPKCPHCHGTGKI FT PRSEPMQYLRNRYEQQQKTFARPSNPLHEWVLEEGSAGNWGRRCQNWKWTSSSQIGFTD FT EDLCDVSTWMAAAQILLDEEDCAVCFPGSVYKRLNGGGKGYDDWCRLPPNKEMCSRLFD FT WWHRKYTPGYHTPEDTLADFVKPRMGECTLPIERDVYLLPREWSGKVPRGDTSNFHWCL FT DGLKSSLEEFLDVFYDCAAQFDGELEISLGAHNKATRCHGKLGGVQVLFTTPAVCSPAK FT LLPEIGESDFVELEEEETVSIPSLFKDNGLSELYMNLILKQAVVTPTLMAHPDQDETED FT QLDHLENKQGGEIVSTPSFIKMLKDKRKEVRGKEFVEGSEGRLVRSADLELSKKDIFLA FT HTLMDKFHGMSIVRKFGKSDPKLTKVCVDLTNQEEVIRFPAKELQTTSEGVLSAQTFTV FT LNRPQFKELNKLAEAGWKEAKSVCLNLHIRSYLPVHLPVYAFCVIMWGHSSNAEQASLS FT GAYVYLGDQEASVLQLPLLCGYIGNALEDMDAYKRSLVLSTCFFGTSGLSAGQNMFGIT FT AVEFTEYLPTSYGGITHERDSWNQMLRNHQGVDKQRFISGFNVVDFVEAGKEKQLNFPE FT FDLQPVPKSQPTVRTFGEEKQPLLNKSRSMRVKTFSSFRAGNIPVGRRLDNTTEAINYE FT LARASTSNQPRLDESSCNLKADGDFACGETITLPATSASGSILAKIDLISLIKNTNTRV FT CSEWLMDGYVSQNLRAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPH FT VQTLRDATTSSWIIDFHKMCGQTLNFSGPGFCKPTLYIVVASEFQLARSAETKFRLEFY FT ATGERLVRGLSENPLTYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAK FT RQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGTVPTTDELAQIPHVDV FT TLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKAN FT LCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATT FT GMHFGKCTLHFSWNWFRGKLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPF FT QFGSFAGPISCGGEPMAAENWVRLQIPNMKWITSLTVSIEVHDGFQFYGRSAGPLTIPA FT " FT mat_peptide 276..2771 FT /gene="P2" FT /product="MP" FT mat_peptide 2772..4304 FT /gene="P2" FT /product="CP" XX SQ Sequence 4633 BP; 1179 A; 988 C; 1073 G; 1393 T; 0 other; ttgaaaagaa attttcaagt cttcgctgat cgtaaaactt tccctcttct catcgaagtt 60 caggtaacgc ctgacaccct ctttgttacg aaattgtttt ctttctctct cttgatcctg 120 cttttctcaa atcctgtaac caatcaggtt atctttgtgg tgtattgaag aaccactatt 180 gaagtgtagg atagcgccta ccatttgaat atcaggatag cgcctgattt ctcttttttt 240 tttttctaat gtcaactcac tccttatagc ctacaatggg ttttaaggaa ctgttttctt 300 cttctctcgg cgatgccgcg agagctaagg tttcccttgt cagggggatg tcggggtggc 360 ttgataccac cttagctact gtccaggctg ccggacctga aatccggaac tacgcatact 420 ctgccctttg ggctgaggtt gattccgtta aggaattgat gccggtaacg ccggctatgc 480 tatgtgccca actccgtaag gagttgtggt gcgatcaaaa acgcacacag cggtgtgccc 540 cttcttccac ctcttgcttt tgcaagtgtg gtggcatgcc cctccctccc tctattgaat 600 gggtggatga ggaggtgatc atagagaact gcccgtctgg cagaaatcta tgtcacaatg 660 gtgttcgttg catacgacat catgggcctg gtgtggctct ggagagagtc caagtgcttg 720 tggaagcacc aaaatgtcca cactgccatg ggacaggtaa aatccctaga agtgagccta 780 tgcaatatct tcgtaaccgt tacgagcagc aacaaaaaac ctttgctcgt ccttctaacc 840 ctctccatga atgggtgttg gaagaaggta gtgctggcaa ctggggacgc cgttgtcaaa 900 actggaagtg gacttccagt tctcaaatag gcttcactga tgaagaccta tgtgatgtca 960 gtacttggat ggcagctgca caaattcttc ttgatgagga agattgtgcc gtttgcttcc 1020 ctggttcagt ctacaagaga ctgaatgggg gaggcaaggg ctatgatgac tggtgtcgtc 1080 tgcctccaaa caaggaaatg tgctccagac tttttgactg gtggcacaga aagtataccc 1140 ctgggtacca tacacccgag gatacacttg cggattttgt caagccacgc atgggggaat 1200 gcactctacc aattgaaaga gatgtgtatt tgctccctcg tgagtggtct ggtaaggtcc 1260 ccagagggga tacttctaat ttccactggt gccttgatgg acttaaaagt tcactcgagg 1320 aatttcttga tgtcttctat gactgcgctg cgcaatttga tggagaatta gagatttcct 1380 tgggtgctca taacaaggca accagatgcc atggaaagct tggtggggtc caagttctgt 1440 tcacaacccc cgcagtctgt tcacctgcga aactcctacc tgaaattggg gagagtgatt 1500 ttgtagagtt ggaagaagaa gaaactgttt ctattccttc tctctttaag gataatggct 1560 tgtctgaact ttatatgaat ctcatattga agcaggctgt tgtgacacca actctcatgg 1620 cgcaccctga tcaggatgaa actgaggatc aacttgatca tctcgagaat aaacagggtg 1680 gagaaattgt ctcaactcct tctttcatta aaatgctgaa agataagcgc aaggaagtgc 1740 gcgggaagga gtttgtcgag ggttctgagg gtcgtcttgt tcgctcagct gatttagagt 1800 tgagtaagaa agatatcttt cttgcccaca ctttaatgga taaattccat ggtatgagca 1860 ttgttaggaa atttgggaag agcgacccaa aattgactaa agtttgtgtt gacttgacca 1920 accaggagga ggtgatacga ttccccgcaa aggaattaca aaccacctct gaaggcgttt 1980 tgtctgcaca gacttttact gtgttaaatc gcccgcagtt taaagaattg aataaacttg 2040 ctgaagcggg atggaaagag gcaaaatctg tttgtctcaa tttacacatt cggagttatc 2100 tccccgtgca tctacccgtt tacgcttttt gcgttatcat gtgggggcat tcttcgaatg 2160 cagaacaggc cagtcttagt ggagcctatg tatatcttgg ggatcaagag gcctctgttt 2220 tacagttgcc cctactctgt ggttacatcg gcaatgctct ggaagatatg gacgcataca 2280 agcgatcact cgttctgtcc acgtgcttct ttggtacttc agggctttcc gctggccaga 2340 atatgtttgg aatcactgct gttgagttca ctgaatacct ccctacttct tatggaggga 2400 ttacacatga gcgtgattcc tggaaccaaa tgttacgaaa ccaccagggt gttgacaaac 2460 agagatttat ctctggattc aatgtggtgg atttcgttga ggctggcaag gaaaagcaat 2520 tgaatttccc agaatttgat ttgcagcctg tgcccaagag ccaaccaact gttcgtactt 2580 ttggggaaga gaaacaacct cttctgaata aaagtcgtag tatgcgcgtt aaaacttttt 2640 cttccttcag ggctggcaac attcctgttg gtagacgttt agacaatact acagaggcta 2700 taaattacga gctagcgcga gcctcaacta gcaatcaacc ccgtcttgat gaatcaagtt 2760 gtaatttgaa ggcagacggg gattttgcct gtggtgaaac catcaccctc ccggcaacta 2820 gtgcgagtgg tagtattctt gcaaaaatcg atctaatttc tctgatcaag aatacgaaca 2880 cacgtgtttg tagtgaatgg ctcatggatg gctatgttag ccaaaattta cgagccgttt 2940 cacatttggc tccaaattct tttagtggga tttctatatg gtacattttt gatgcctatg 3000 gtaagatacc agcggatatt tccactacca ttgaactgga gatggccaag tgccttagcc 3060 cgcatgttca aacgttgcgt gatgccacca catcttcatg gattattgat tttcataaga 3120 tgtgtgggca aacgcttaat ttttctgggc cgggcttctg caaaccaacg ctctatattg 3180 tagtggcttc agaatttcaa cttgcacgtt cagctgaaac taaatttcgg ttggaattct 3240 atgccactgg agagagattg gttaggggat tgtcagagaa cccattgaca tatcccatag 3300 aatcaaggca ccttgaggat ttggatctta tcctcaagtc tggcagcatt gctgtgggca 3360 catatactat gactaaggtg cctgtctctc tcgcaatgcg gatcgactca gctgcaaagc 3420 gtcaagcata ttcatatgca gctggaatac tttcccattt tttgggagtc ggtggtgaaa 3480 tcatctttag cgtacacagt actgcaagca cctttgtttc ttgcagtttg cgtatcgcac 3540 tttggggtac agtcccaacc actgatgaac tagcacagat accacatgtg gatgttactc 3600 ttgatacgaa ggcaactctg caaatacagt ctcccttctt tgccacggca aattttgggg 3660 atgacggtac tgccttctat atttccactc tgtgcgcacc cctagcacca gaaaccatgg 3720 aaactggatt tcaatattat atacatatcc atggtataaa ggtcaaggct aatttgtgtc 3780 gggaaataaa ttacaaccag cattttgctt ggtttatgct tgagcatctc gatacaaata 3840 ctactggtat ggtcagcttg aaaattcccg cacgcatggc aaatttgact tcgaaagagg 3900 tacaaattac caactttgtc aatgctctag ccattatgtg tgccaccact ggtatgcatt 3960 tcgggaaatg tactctccac ttctcatgga attggtttag agggaagctt gctgaccaat 4020 ctggcgtatt tagcatccaa acggggatgg ggaaatccac tgttgccgaa cattttggtg 4080 gaaggcatag ttttaattat cctgctacca atttttccct accatttcag tttggctcct 4140 ttgctggacc tatttcttgt gggggtgaac ctatggcggc agaaaactgg gttagattgc 4200 aaattccaaa tatgaaatgg attaccagtt tgactgttag catagaggtt catgatggct 4260 tccaatttta tgggagaagt gcaggtcctt taactattcc tgcatagatt cttaggcatt 4320 tcttacagag aatacccctc cctggtgatc tggagtaaaa ggagccattc ggtgttgaga 4380 taaccgatct gaaataactc aactttcttc tagagtgtca taaagactct atgcgttcgg 4440 tcccgcagcg aaatataggc cgctttgaaa ttttcttttg ttttcctagt ttaggtttaa 4500 tttctgcagg gtgtttaatt tccgctttta tgtggcgata atcaaggttt gtccttttcc 4560 ttggtttgct atgttggaca caaaaagatt ttctctttct tttgtatatg ataaaatatt 4620 ttctgcaaaa agc 4633 //