ID AY150305; SV 1; circular; genomic DNA; STD; VRL; 2686 BP. XX AC AY150305; XX DT 05-FEB-2003 (Rel. 74, Created) DT 26-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Tomato leaf curl New Delhi virus - [PkT5/6] segment DNA-B, complete DE sequence. XX KW . XX OS Tomato leaf curl New Delhi virus - [PkT5/6] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2686 RX AGRICOLA; IND44790013. RA Shih S.L., Tsai W.S., Green S.K., Khalid S., Ahmad I., Rezaian M.A., RA Smith J.; RT "Molecular Characterization of Tomato and Chili Leaf Curl Begomoviruses RT from Pakistan"; RL Plant Dis. 87(2):200-200(2003). XX RN [2] RP 1-2686 RA Shih S.L., Tsai W.S., Green S.K., Khalid S.; RT ; RL Submitted (13-SEP-2002) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center, P.O. Box RL 42, Shanhua, Tainan, Taiwan, Republic of China XX DR MD5; 0c54d6227c7c71bead93b8b641497557. DR EuropePMC; PMC3120783; 21496256. XX FH Key Location/Qualifiers FH FT source 1..2686 FT /organism="Tomato leaf curl New Delhi virus - [PkT5/6]" FT /segment="DNA-B" FT /mol_type="genomic DNA" FT /country="Pakistan:Dargai, North West Frontier Province" FT /isolation_source="tomato plant with leaf curl symptoms in FT 2001" FT /clone="BPakT5" FT /db_xref="taxon:270144" FT gene 436..1242 FT /gene="BV1" FT CDS 436..1242 FT /codon_start=1 FT /gene="BV1" FT /product="BV1 protein" FT /db_xref="GOA:Q80A68" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q80A68" FT /protein_id="AAO32353.1" FT /translation="MAFPSPYSTPRRSGYTINRIYNGNKSFRLWNTRKFQNWKRYRSTH FT SVSRSPTELFGDPISKQYTRKEICETQEGSEYLLHNNRYMTSYVTYPSKTRTGTNNRVR FT SYIKLKSLNISGTFAVRKSDLMTEVVQTNGLYGVMSVVVVRDKSPKIYSATQPLIPFVE FT LFGSVNACRGSLKVAERHHERFVLLNQTSIVVNTPHSNAIKKFCIRNCIPRTYTTWVTF FT KDDEEDSCTGQYSNTLRNAIILYYVWLSDVSSQVDLYSNVILNYIG" FT gene complement(1299..2144) FT /gene="BC1" FT CDS complement(1299..2144) FT /codon_start=1 FT /gene="BC1" FT /product="BC1 protein" FT /db_xref="GOA:Q80A67" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q80A67" FT /protein_id="AAO32354.1" FT /translation="MSIGNEGLGIGVGGYIQSERVEYALTNDAAEVTLSFPSMFEQKLS FT QLRNRCMKIDHVVLEYRSQVPINAVGHVVVEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSSFFSLKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRPPKIEIQ FT TKEFTMNDIDFWSVGSKPQTRRLVDGSRLMGHNSRSLRVPYLAIGPNESWASRSEIGLS FT SVTSRPYKNLSGLDDSAIDPGPSASQVGSITREEIADIITKTVEQCIKSNVNAPLSKGV FT " XX SQ Sequence 2686 BP; 781 A; 603 C; 488 G; 814 T; 0 other; accgaatggc cgcgaaaatt tgcccacctc atcgtgaccg ttgctacgta tttattgcaa 60 gccgctatcc gtccgatttg caacacgtgt atcccactaa cagactttat gcaaataaat 120 gtctgaaatc catgtctata atgcatatgt ggtccccaat catttttcta tatctaatat 180 gtgcggttgt ggtcccccgc actatatata gtctttagca tagttcttac cgcgttcttt 240 cttttatcga tttttatcgg tcgagatcat aacaaatata tacccaacat atccgccgtt 300 cgatcttatg agatatgcat taattcaaac aatatttgtt tgaagtttat tcactctgtg 360 cattactaat tcataaaact gctacatata tgacattaca tgttgtcgtt gccacacatt 420 ttttatccca tctaaatggc ttttccttct ccttattcca cccctcgccg ttctggttac 480 acaatcaaca gaatatacaa cggaaacaag agtttccgct tgtggaacac ccggaagttt 540 caaaactgga agcgctatcg cagtactcat tccgtctcac gttctccaac cgaactgttt 600 ggagatccaa tttccaaaca atatacgcgt aaggaaatat gtgaaacaca ggagggatcg 660 gagtatctgc tgcacaacaa tcgttacatg acgtcatatg tcacgtatcc atccaaaaca 720 agaactggaa cgaacaaccg cgttcgttcc tatatcaagc taaagagtct gaacatatct 780 gggacatttg ctgttcgtaa atctgacttg atgaccgaag tggtgcaaac aaatggatta 840 tatggagtga tgtctgtagt tgtagtccgt gataaatctc caaagattta ttctgcgacc 900 caacccttaa taccgtttgt tgagctattt ggatctgtta atgcttgcag gggaagtctg 960 aaagtggcag aacgccacca tgaacgcttc gtgctgctga atcaaacatc cattgtcgtc 1020 aataccccac attccaacgc aatcaagaaa ttctgcattc gtaactgcat cccaagaact 1080 tataccacct gggtaacgtt caaggacgac gaagaagata gctgtaccgg acaatattct 1140 aacaccctcc gaaatgcaat tattttatat tatgtatggt taagcgacgt atcctcgcaa 1200 gtcgatcttt atagcaatgt aatactaaat tacattggat aatgtaaaca aatgcacaag 1260 aaacatttta tttatgaata aatttgactt aaaatttatt acacaccctt tgataatgga 1320 gcatttacat tggattttat acattgttct acagtcttcg taattatatc cgcaatttct 1380 tccctcgtaa tactccccac ctgcgatgcc gatggacctg gatcgattgc cgaatcgtcc 1440 aatccgctca ggtttttata tggtctgctg gtgacggacg aaagaccgat ctccgaccta 1500 cttgcccatg attcgttcgg acctatagct agatatggca cacgcaacga tcttgaatta 1560 tgtcccatta aacgtgaacc atctaccaaa cgccttgttt gtggttttga acccactgac 1620 cagaaatcaa tgtcgttcat ggtgaattcc ttggtctgta tttctatctt cggtggtcgg 1680 aattcgacgt cagtcgaatg ttttgccgac gacagcttca atttccctag catcttacag 1740 aagtgtaccc cattcacgac gtttgtgttc tccactctgt attcaactct ccaaggattc 1800 ttatccttga gagaaaagaa tgaggaagag tagtagtgca ggttgcaatt gcatttgatc 1860 ggaattgtga attccgcttg ttttgtgtcc ccctccgtca atctcatgtc gtgtatctct 1920 accacgacat gaccaacagc attaattgga acctgactgc gatattccag aactacgtga 1980 tctattttca tgcatctatt cctcaactgg ctaagctttt gctcgaacat ggacggaaat 2040 gacaaggtaa cctctgcagc atcgtttgtg agcgcgtact caacgcgctc agattggatg 2100 tacccaccca ctccaatacc cagaccttca tttcctattg acatactggc cgcgcagcgc 2160 aacacccagt taaacacaga aagacaaatt acgatgaaaa aaccccaagg aagaagaaac 2220 cctagcaaac aacgaagttg ttatgcaaag aatggtggta catggtttta taattctttt 2280 gtatgtcatg tctatgtcaa cacaaatacc cttaaatgaa cggcacatat ttttccacga 2340 aaaatgaatt gtgcgtgctt atcgttgttc atataatttt gttatatatg tgaagcccaa 2400 tttatgttaa ttgggctgca gaaaaaatcc ttatgaagcc catgaaattg gcccactatt 2460 taagcctatt tcacaaacga caccgtttgt gggttatttt gtgtagaaaa gttagagaga 2520 agcttgagtt tctctctcta gaactgaatc agtgtctctc aactttctct atgtaattgg 2580 tgtctggggt cctatatata ggtaagacac caaatggcag aattgtaatt ttgaaaagaa 2640 aattacttta attcaaagtc accaaagcgg ccattcgtat aatatt 2686 //