ID AY150304; SV 1; circular; genomic DNA; STD; VRL; 2728 BP. XX AC AY150304; XX DT 05-FEB-2003 (Rel. 74, Created) DT 26-JAN-2007 (Rel. 90, Last updated, Version 4) XX DE Tomato leaf curl New Delhi virus - [PkT1/8] segment DNA-B, complete DE sequence. XX KW . XX OS Tomato leaf curl New Delhi virus - [PkT1/8] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2728 RX AGRICOLA; IND44790013. RA Shih S.L., Tsai W.S., Green S.K., Khalid S., Ahmad I., Rezaian M.A., RA Smith J.; RT "Molecular Characterization of Tomato and Chili Leaf Curl Begomoviruses RT from Pakistan"; RL Plant Dis. 87(2):200-200(2003). XX RN [2] RP 1-2728 RA Shih S.L., Tsai W.S., Green S.K., Khalid S.; RT ; RL Submitted (13-SEP-2002) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center, P.O. Box RL 42, Shanhua, Tainan, Taiwan, Republic of China XX DR MD5; 25a4aa45e84d367c134c226463e513b3. DR EuropePMC; PMC3120783; 21496256. XX FH Key Location/Qualifiers FH FT source 1..2728 FT /organism="Tomato leaf curl New Delhi virus - [PkT1/8]" FT /segment="DNA-B" FT /mol_type="genomic DNA" FT /country="Pakistan:Islamabad" FT /isolation_source="tomato plant with leaf curl symptoms in FT 2000" FT /clone="BPakT1" FT /db_xref="taxon:270143" FT gene 402..1277 FT /gene="BV1" FT CDS 402..1277 FT /codon_start=1 FT /gene="BV1" FT /product="BV1 protein" FT /db_xref="GOA:Q80A70" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q80A70" FT /protein_id="AAO32351.1" FT /translation="MFLSLPHISYPNKMAYPSPYPNKMAYPSPYPTPRRAGYTFNRTYT FT GNRSFRLWKTRKFVNWKRYRSTNPVLRSPTELFGDPISKQYTRKEICETQEGSDYLLHN FT NRFVTSYVTYPSKTRTGTNNRVRSYIKLKSLNISGTFAVRKSDLMTEVLQTNGLYGVMS FT VVVVRDKSPKIYSATQPLIPFVELFGSVNACRGSLKVAERHHERFVLLNQTSIVVNTPH FT SNAIKKFCIRNCIPRTYTTWVTFKDEEEDSCTGRYSNTLRNAIILYYVWLSDVSSQVDL FT YSNVILNYIG" FT gene complement(1335..2180) FT /gene="BC1" FT CDS complement(1335..2180) FT /codon_start=1 FT /gene="BC1" FT /product="BC1 protein" FT /db_xref="GOA:Q80A69" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q80A69" FT /protein_id="AAO32352.1" FT /translation="MSIGNEGMGMGVGGYIQSERVEYALTNDAAEVTLSFPSMFEQKLS FT QLRNRCMKIDHVVLEYRSQVPINSVGHVVIEIRDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSSFFSLKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRPPKIEIQ FT TKEFTVNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPYLAIGPNESWASRSEIGHS FT SVTSRPYKNLSGLDDSAIDPGPSASQAGSITREEIADIITKTVEQCIKSNVNAPVTKDV FT " XX SQ Sequence 2728 BP; 788 A; 617 C; 497 G; 826 T; 0 other; accgaaaggc cgcgaaaatt tttccccctc atcctgatcg ttgctgcgta atcattgcac 60 gccgttatcc gtccgatttg caacacgtgt ctcccactaa cagactttat gtaaataaat 120 gtctgatatc cggctataca atgctaaagt ggtccccata tatattgtcg tacatctact 180 aagtgcggtt gtggtccctc gcactatcta aagttatcat tacaaattgt agtgcgttct 240 gttctgaccc aattttgaac ggttcagatc aaaattaata tgtccccaac atagccgtcg 300 tccgatctta tgagatatgc tttaattcaa acaatatttg tttgaatttt atacatgcag 360 tacaatagta attcataaaa ctgctacata tatgacatta gatgttttta tcgttgccac 420 acatttcata tcccaacaaa atggcttatc cttctcctta tcccaacaaa atggcttatc 480 cttctcctta tcccacacct cgccgcgctg gttatacatt caacagaaca tacaccggaa 540 acaggagttt ccgcttgtgg aagacccgaa agtttgtaaa ctggaagcgc tatcgcagta 600 ctaatcctgt tctacgttct ccaaccgaac tgtttggcga tccaatctcc aaacaatata 660 cgcgtaagga aatctgtgaa acacaggagg gatctgatta tctgctgcac aacaatcgtt 720 tcgtgacgtc atatgtcacc tatccatcca aaacaagaac gggaacgaac aaccgcgttc 780 gttcctacat caagttaaag agtctgaaca tatctgggac atttgcagtt cgtaagtctg 840 atttgatgac cgaagtcttg caaacaaatg gactatacgg agtgatgtct gtagttgtag 900 tccgtgataa atctccaaag atttattcag cgacccaacc cttaataccg tttgttgagc 960 tattcggatc tgttaatgct tgcaggggaa gtctgaaagt ggcagaacgc caccatgaac 1020 gcttcgtact gctgaatcaa acatccatcg tcgtcaatac cccacattct aacgctatca 1080 agaaattctg cattcgaaac tgcattccaa gaacttacac aacctgggta acgttcaagg 1140 acgaagaaga agatagctgt actggacgat attctaacac ccttagaaat gctattattt 1200 tatattatgt atggttaagc gatgtatcct cacaagttga tctttatagc aatgtaattc 1260 ttaattacat tggataatca atacattttg cactccaaag attttattta tgaataaatg 1320 tgacaaaaca tttattacac gtcttttgtt actggagcat ttacatttga ttttatacat 1380 tgttctacag tcttcgtaat tatatccgca atctcttccc tcgtaatact acccgcctgt 1440 gatgccgatg gacctggatc gattgccgaa tcgtccaatc cgctcaggtt tttgtatggt 1500 ctgctggtga cggacgaatg tccgatctcc gatctgcttg cccatgattc gttcggacct 1560 attgccagat atggaacccg taacgatctt gaactatgtc ccattaatct tgaaccatct 1620 acaagacgcc ttgtttgtgg tttggaaccc actgaccaaa aatcaatgtc gttgacggtg 1680 aactccttgg tctgtatctc tattttcggt ggtcggaatt cgacgtcagt cgaatgtttt 1740 gccgacgaca gcttcaattt ccctaacatc ttacagaagt gcactccatt cacgacgttt 1800 gtgttctcca cgcggtattc aactctccaa ggattcttat ccttgagaga gaagaatgag 1860 gaagaatagt agtgcaggtt gcaattgcat ttgatcggaa ttgtgaattc cgcttgtttt 1920 gtgtcccctt ccgtcaatct catgtcgcgt atctctatca cgacatgacc aacagaatta 1980 attggaacct gactgcgata ttccagtacc acgtgatcta ttttcatgca tcgattcctc 2040 aactggctaa gcttttgctc gaacatggac ggaaatgaca aggtaacttc tgcagcatcg 2100 tttgtgagcg cgtactcgac gcgctcagat tggatatatc cacctactcc cattcccata 2160 ccttcatttc ctattgacat tttggtcgcg cagcgcaaca cccagtgaaa cacagaaaga 2220 cagactatga tcaaagaaac cccaactgcg aagaaaccct agcaaacaag gaagttgttt 2280 tgcaaagaac ggatgtagat ggatttataa ttctttagca tgtcatgtct atgtcacacg 2340 aaatacccta aaatgaacgg cacatatttt tctacgaaaa aggaaatgtg ccattatata 2400 cttgcattta tgttatatgc aatccatata tgaagcccaa ttgtataaaa ttggtctgca 2460 actctaacat atgaaaaagc ccataaaatt ggtccagcat ccaggtccat ttttaaaatg 2520 agatcgtttg ttgtggcata agttcgcaaa agtttgagag aagcagcagt ttctctctct 2580 agacaccata ttggcctccc gcaactctct ctatgtaatt ggtgtctgga gtcctatata 2640 taggtaagac accatatggc ataattgtaa ttttgaaaag aaaattactt taattcaaat 2700 tccttatagc ggcctttcgt ataatatt 2728 //