ID AY144569; SV 1; linear; genomic RNA; STD; VRL; 3164 BP. XX AC AY144569; XX DT 13-DEC-2002 (Rel. 74, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Rice black streaked dwarf virus segment 5, complete sequence. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3164 RA Wang Z., Fang S., Yu J.; RT "Complete sequence of rice black streaked dwarf virus genome"; RL Unpublished. XX RN [2] RP 1-3164 RA Wang Z., Fang S., Yu J.; RT ; RL Submitted (26-AUG-2002) to the INSDC. RL State Key Laboratory for Agrobiotechnology, China Agricultural University, RL 2 Yuanmingyuan West Road, Beijing, Beijing 100094, China XX DR MD5; a01e5efb543fcda6d84150ea0bf29644. DR EuropePMC; PMC2666654; 19292925. XX FH Key Location/Qualifiers FH FT source 1..3164 FT /organism="Rice black streaked dwarf virus" FT /segment="5" FT /mol_type="genomic RNA" FT /db_xref="taxon:10990" FT 5'UTR 1..15 FT CDS 16..2829 FT /codon_start=1 FT /product="103 kD protein" FT /db_xref="GOA:Q8B4V6" FT /db_xref="UniProtKB/TrEMBL:Q8B4V6" FT /protein_id="AAN77722.1" FT /translation="MTYSKVKMTTDPSEMSLKKVLFDPTNEIRILNHEQADNTLLTTMM FT IIHEFSDLTTRDSVVPQIAEMAKSEINQTIDSIVDSVSTAFVDHYQEIIDKNAKLGNPL FT SPNFKNVLSVNTCIPGLETLYVEREKWELLNRLYRLNKKLSQKYPLDDLLKGHFPDIST FT GDETTDEYISTIIIILEVFVGILTINSVYGGAIFSVLILMSDHSSYLFIMCLLLHAIVQ FT AVKIYLGKRESEISEGKPSYVDKVKNDDVKDVLINDTMFIFANTTKEDISQFFDISFKV FT HTHKSSEQHPFRTGFISMLTKITKIQGIKEEVKFVGYLDGISKDELVGASGKKLSASQR FT HAIGTKYDDKTQTLIISHPILKDAFSRLEQLGLLKDGLLSKDDFLKIPIDFMTIDFNEM FT ETLCSYVTPFAINADLRHASQMSYNWKSLTTEKRPYQFLKEGMSVNFYDPIFECFFPNH FT FIKAVKKDAIAIDPEKKVGYEELENFATLVEKHDDYSYNRTDAYSILKFLHEGHHSCGC FT AEYFAGFVSDYLTSIEVLNHIKDSKLSKLDYHLKQEYESLFKKTRRQDILRMPVSEHAD FT YFARCAYNESFFDIDFCFLTDGDCHSLVVRFTKRKPYFRFKDDKLDKLNVLSLYDLVVN FT CNHGELSSASRVGWNLVELDSMGSDENIGRITRKPSSKTRQFTYDLMMVNFNGSVTQYV FT IPEWLGESITLYEEKHEGAALFAKSSLFSTMSCLSTHLISNYKLIKCFENSSNKLVSFM FT DGVISAMSTSIEFSPFKNTVLNNLKKCTQTIDYNNAKTSASPSSSRSKSFRSYLRSSRP FT NHVYDKISTCITKKQNGMFSSEEMCMPYTLRKFGRLGIDDDDCELSDAISSREELYNNH FT PCALRLRNLGHSVFGKHFRCKACRNNYGTSFELSLCQLGHQETAIETVRSNTITSQSRT FT KLQPSST" FT CDS 2462..3073 FT /codon_start=1 FT /product="67 kD protein" FT /db_xref="UniProtKB/TrEMBL:Q8B4V5" FT /protein_id="AAN77723.1" FT /translation="MTKFPLVSQRNKMGCSHQKKCVCLILSENLADWELTMTTVNCQML FT SHQGKNYTTIIPVRCDSEISDILSSANILDVRHVVTITELASNFPCVNWDIKRQQLKRY FT DPTQLLVNLEQNFNHLQRDDRLCFNSCYDYPNSHIINRILNTKKDVIPFIFKHYDDSNS FT KSIADINVFNSPSYSKHVFEKTNIIKTLLFGSTLGVMLHL" FT 3'UTR 3074..3164 XX SQ Sequence 3164 BP; 1018 A; 619 C; 564 G; 963 T; 0 other; aagttttttt cactcatgac atattcgaaa gtgaagatga ccacagatcc ttccgaaatg 60 tctctgaaaa aagtgctctt cgacccaacc aacgaaatta gaattctcaa ccacgaacaa 120 gccgataaca cactacttac tacaatgatg attattcacg aattctccga cctaacgacc 180 cgcgactcag tagtccctca aattgctgaa atggcaaaaa gcgaaattaa ccaaacaatt 240 gactcgattg ttgattcagt cagtactgcg tttgttgacc attatcaaga aatcattgac 300 aagaacgcta agttgggaaa tcctctgtct ccaaatttca aaaacgtctt atctgtaaac 360 acatgtatcc ctggtttaga aactttgtac gttgaacgtg aaaaatggga attgctcaat 420 cgtttgtacc gactaaacaa aaagctaagc caaaagtatc ctttggatga tttacttaaa 480 ggacattttc ccgacatttc aacaggtgac gaaacaacgg atgagtatat ttcaactata 540 atcatcattc ttgaagtttt tgttggcata cttactatta atagtgttta tggtggtgca 600 atttttagtg ttctcattct catgtcagat cattcaagct atcttttcat catgtgtcta 660 cttctacatg caattgttca ggctgtcaaa atttatctag gcaagcgaga gtcagaaatt 720 agtgaaggaa agccttctta cgtcgataaa gttaaaaacg atgatgttaa agatgttttg 780 attaatgaca ccatgtttat tttcgctaat actacaaagg aagacatctc tcagtttttc 840 gacatttcgt ttaaagtaca cacccataaa tcttcagaac aacatccctt tcgcactgga 900 tttatttcaa tgttgaccaa aattaccaag attcaaggaa ttaaagagga agtaaaattc 960 gttggatatt tagacggcat aagtaaagac gaattagttg gtgcttcagg caaaaagttg 1020 tcagcttcgc aaagacatgc tattggaacg aaatatgatg acaagactca aactttgatt 1080 atcagtcatc cgatattaaa agatgctttt tctcgactag aacaattagg cttattgaaa 1140 gatggacttc tgtctaaaga tgattttttg aagataccaa ttgatttcat gactatcgat 1200 tttaatgaga tggaaacttt gtgcagttac gtcactcctt ttgctatcaa cgccgatctt 1260 agacatgctt cccaaatgtc ttataattgg aaaagtctca ccactgaaaa acgtccatat 1320 cagtttctga aagaaggaat gagcgtaaac ttctacgatc ctatctttga atgctttttc 1380 ccaaatcatt tcatcaaagc agtcaaaaaa gacgccattg caattgaccc tgaaaagaaa 1440 gttggatacg aagaactgga aaattttgca acacttgtag aaaagcacga tgattactct 1500 tacaatagaa cagatgccta ctccattttg aaatttttac acgaaggaca tcacagctgt 1560 ggctgtgcag aatactttgc tggttttgtc tctgattacc taacctcaat tgaagtgtta 1620 aaccacatta aggattccaa actgtcaaaa cttgattacc atttgaagca agaatacgag 1680 tcattattta agaaaactcg acgtcaagac attcttagaa tgcccgtatc cgaacatgca 1740 gattatttcg ctcgatgcgc ttacaacgaa tcattctttg atattgattt ttgtttcctc 1800 acagatggtg actgtcactc ccttgtggta agatttacta aacgcaaacc ttatttccga 1860 ttcaaagatg acaagttaga caagttgaat gttctttcgt tgtatgattt agttgtcaac 1920 tgtaatcacg gtgaattgtc atcagcaagt cgtgtcggtt ggaatttagt agaactggat 1980 tctatgggat cagacgaaaa tattggacgt attactagaa aaccaagcag caagacacgt 2040 cagtttactt acgatttaat gatggtaaat ttcaacggtt cagttactca atacgtgatt 2100 ccagaatggc ttggagagag cattactttg tatgaagaga agcatgaagg agcagctttg 2160 ttcgcaaaat caagtttgtt ttcaaccatg agctgtttgt ccactcactt aatatctaat 2220 tacaagctca tcaagtgttt cgagaatagt tctaacaagt tggtttcttt tatggatggt 2280 gtaatcagcg cgatgtctac aagtatagag ttctctcctt tcaaaaacac tgttttgaac 2340 aatcttaaga aatgcactca aaccattgat tacaacaacg caaagacttc tgcgtcaccc 2400 agttccagcc gaagtaagtc ttttcgttcc tacttacgat cttctcgacc aaaccacgtt 2460 tatgacaaaa tttccacttg tatcacaaag aaacaaaatg ggatgttctc atcagaagaa 2520 atgtgtatgc cttatactct cagaaaattt ggcagattgg gaattgacga tgacgactgt 2580 gaattgtcag atgctatctc atcaagggaa gaattataca acaatcatcc ctgtgcgttg 2640 cgactcagaa atctcggaca ttctgtcttc ggcaaacatt ttagatgtaa ggcatgtcgt 2700 aacaattacg gaactagctt cgaactttcc ttgtgtcaac tgggacatca agagacagca 2760 attgaaacgg tacgatccaa cacaattact agtcaatctc gaacaaaact tcaaccatct 2820 tcaacgtgat gaccgtttgt gcttcaactc ttgctacgat tatcctaact ctcatatcat 2880 taacaggatt ttaaacacta aaaaagacgt cattcctttt atatttaaac actacgatga 2940 ttccaattcg aaatcaatag ctgatatcaa tgtgttcaat tcaccatctt attctaaaca 3000 cgtatttgaa aagactaaca ttattaaaac tctacttttc ggcagcacgc taggagtcat 3060 gcttcatctc tgaggatgtg ttatccctgg ctgcaagcgg ggggcacgtg aacaagggtt 3120 ctgtgtctcc ttagatgcgg gggggagtga atacagctaa tgtc 3164 //