ID AY123970; SV 1; linear; genomic RNA; STD; VRL; 2778 BP. XX AC AY123970; XX DT 24-JUL-2003 (Rel. 76, Created) DT 25-MAR-2005 (Rel. 83, Last updated, Version 2) XX DE Marine birnavirus - AY-98 VP1 (vp1) gene, complete cds. XX KW . XX OS Marine birnavirus - AY-98 OC Viruses; Riboviria; Birnaviridae; Aquabirnavirus. XX RN [1] RP 1-2778 RA Zhang C.X., Suzuki S.; RT "Genome segment B encoding the RNA-dependent RNA polymerase protein VP1 of RT the marine birnavirus isolated from ayu, Plecoglossus altivelis"; RL Unpublished. XX RN [2] RP 1-2778 RA Zhang C.X., Suzuki S.; RT ; RL Submitted (19-JUN-2002) to the INSDC. RL Center for Marine Environmental Studies, Ehime University, Matsuyama, Ehime RL 790-8577, Japan XX DR MD5; 26799e13e972d60dd9d31afab7ad90c4. XX FH Key Location/Qualifiers FH FT source 1..2778 FT /organism="Marine birnavirus - AY-98" FT /segment="B" FT /host="Plecoglossus altivelis" FT /isolate="AY-98" FT /mol_type="genomic RNA" FT /country="Japan" FT /note="isolated in 1998" FT /db_xref="taxon:320045" FT gene 101..2635 FT /gene="vp1" FT CDS 101..2635 FT /codon_start=1 FT /gene="vp1" FT /product="VP1" FT /note="viral protein 1" FT /db_xref="GOA:Q7T8V1" FT /db_xref="InterPro:IPR007098" FT /db_xref="InterPro:IPR007100" FT /db_xref="UniProtKB/TrEMBL:Q7T8V1" FT /protein_id="AAM89503.1" FT /translation="MSDIFNSPQNKASILSALMKSTAGDVEDVLIPKRFRPAKDPLDSP FT QAAAQFLKDNKYRILRPRAIPTMVELETDAALPRLRQMVDDGKLKDTVSVPEGTTAFYP FT KYYPFHKPDHDEVGTFGAPDITLLKQLTFFLLENDFPTGPETLRQVREAIATLQYGSGS FT YSGQLNRLLAMKGVATGRNPNKTPKTVGYSNEQLAKLLEQTLPINPPKNEDPDLRWAPS FT WLINYTGDQSTDKSHLPHVTVKSSAGLPYIGKTKGDTTAEALVLADSFIRDLGKAATSA FT DPETEVKKTITDFWYLSCGLLFPKGERYTQVDWDKKTRNIWSAPYPTHLLLSMVSSPVM FT EESKLNITNTQTPSLYGFSPFHGGMDRIMTIIRDSLDTGEDLVMIYADNIYILQDNTWY FT SIDLEKGEANCTPQHMQAMMYYLLTRGWTNEDGSPRYNPTWATFAMNVAPSMVVDSSCL FT LMNLQLKTYGQGSGNAFTFLNNHLMSTIVVAEWVKAGKPNPMTKEFMDLEEKTGINYKI FT ERELKNLREVIMEAVETAPQDGYLADGSDLPPHKPGRAVELDLLGWSAVYSRQMEMFVP FT VLENERLIASAAYPKGLENKTLARKPGAEIAYQIVRYEAIRLVGGWNNPLLETATKHMS FT LDKRKRLEVKGIDVTGFLDDWNNMSELGGDLEGITLAEPLTNQTLIDINTPLESFDPKE FT RPETPRSPKKTLDEVTAAITSGTYKDPKSAVWRLLDQRTKLRVSTLRDQAAALKPASST FT VENWAEATEELATQQQLLMKANTLLKSSLTETREALETVQSDKIIAGKSNPEKNPGNAA FT NPVVGYGEFSEKIPLTPTQKKNAKRREKQRRN" XX SQ Sequence 2778 BP; 859 A; 799 C; 670 G; 450 T; 0 other; ggaaacagtg ggtcaacgtt ggtggcaccc gacataccac gactgtttac gtatgcacgc 60 aagtgcccct tttaaaacct ctacatttac aactcatgat atgtcggaca tcttcaactc 120 acctcagaac aaggcgtcaa tcttgagtgc tctcatgaaa agcacagcag gagatgtgga 180 agacgtgcta attccaaagc gcttccgacc agccaaggat ccccttgaca gtccacaagc 240 tgcagcacag ttcctaaagg acaacaagta ccgcatactt aggccgcgag ccattccaac 300 catggtcgaa ctagagacag atgccgcgct gcctcgactg cgacagatgg tcgacgatgg 360 caagcttaag gacacggtaa gcgtcccaga aggaaccacc gcattctatc caaaatacta 420 cccattccac aagccagatc atgacgaagt tggaacgttt ggggctccag acatcacact 480 tctgaaacaa ctcacattct tcctactgga aaatgacttt ccaacaggcc cagagacttt 540 acggcaagtc agagaagcca tagccacgct tcagtatggc tcaggcagct actcaggaca 600 gctaaacaga ctcctggcga tgaaaggggt tgcaactgga aggaatccaa acaaaactcc 660 caagacagtg ggctacagca atgagcagct ggccaaactc cttgagcaga cactaccgat 720 caaccctcca aagaacgagg acccagacct ccggtgggcc cccagctggt tgatcaacta 780 caccggagac cagagcaccg acaagtcaca tctgccacac gtgactgtca agtcctcagc 840 cggcctacca tacataggca aaaccaaagg agacacgact gcagaagcgc tcgttctggc 900 tgactccttc ataagagacc tcggaaaagc cgcaacatca gctgatccag agacagaagt 960 aaagaagacc ataactgact tctggtacct gagctgtggg ctgctattcc caaagggcga 1020 gagatacacc caggtggact gggataagaa gacccggaac atatggagcg cgccctaccc 1080 aacacaccta ttgctatcaa tggtgtcatc accggtgatg gaagagtcca agctcaacat 1140 caccaacacc cagactccgt ccctgtacgg gttctctcca ttccatggcg ggatggacag 1200 aataatgacg atcataagag acagtctgga cacaggagag gacctggtga tgatctacgc 1260 agacaacatc tacatactgc aagacaacac ctggtactca atcgacctag agaaaggtga 1320 ggccaactgc acaccacaac acatgcaggc catgatgtac tacctgctaa cgcgaggatg 1380 gacaaatgag gatggctcac cccgctacaa cccaacatgg gcgaccttcg ccatgaacgt 1440 tgcaccgtca atggttgtgg actcatcatg cctattgatg aacctgcaac tcaagacata 1500 cgggcaaggc agcggaaacg ccttcacctt tctcaacaac cacctaatgt caacaatcgt 1560 agttgccgag tgggtaaagg ccggaaaacc caaccccatg acaaaagagt tcatggacct 1620 cgaagagaag actgggataa actacaagat tgagcgggaa ctcaagaatc tacgggaagt 1680 catcatggag gccgtcgaaa cagcacccca ggacggctac ctggccgacg gctcagacct 1740 cccgccacac aaacccggga gagccgtgga gctagaccta ctcggctggt ccgcggtata 1800 cagccgtcag atggagatgt ttgtgccagt cctcgagaac gagcgactaa ttgcatcagc 1860 tgcctaccca aagggtctcg agaacaagac cctagccaga aaacccgggg ccgagatcgc 1920 ataccagata gtcaggtacg aagcaatccg cctggtaggt ggctggaaca atcccctgct 1980 agaaaccgcc acaaaacaca tgtccctaga caagagaaag cgtctagagg taaagggcat 2040 tgacgtcacg gggttcctgg atgactggaa caacatgtca gaactcgggg gtgacctcga 2100 agggataacc ctagctgaac ccctgacaaa ccaaaccctg atagacatca acacacccct 2160 tgagagcttc gacccaaaag agaggcccga aacacctcgg tcacccaaga agactctgga 2220 tgaagtaacc gccgccataa cctccgggac ttacaaggac cccaagagtg ccgtgtggag 2280 gctgctcgac cagaggacca agctaagagt cagcacgcta agagaccagg cggctgccct 2340 caaaccagca tcatccacag tggaaaactg ggccgaagca acggaggaac tagcaacaca 2400 acaacagctt ctcatgaaag ccaacacgct gctcaagagc agtctcacag agaccagaga 2460 agcgctggag accgtccagt cagacaaaat catcgctgga aaatcgaacc ccgagaagaa 2520 ccccggcaac gcagccaacc ccgtggttgg ctacggcgaa ttcagcgaaa agattcctct 2580 aactcccacg cagaagaaga acgccaagcg aagggagaaa cagaggcgca actaataaga 2640 agacaaccgg gaagtatccg aaatgaccta gctggactca tatgtaagct ccgcgccgca 2700 cggcaagcta aacaaaagta gtgaccctga gagtgccacc aacatgaccc tagacaacat 2760 ccggttccgc cagggacc 2778 //