ID AY122286; SV 1; linear; mRNA; STD; VRL; 4271 BP. XX AC AY122286; XX DT 06-AUG-2002 (Rel. 72, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Melon necrotic spot virus isolate Malfa5, complete genome. XX KW . XX OS Melon necrotic spot virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Gammacarmovirus. XX RN [1] RP 1-4271 RX DOI; 10.1007/s00705-002-0927-y. RX PUBMED; 12607110. RA Diaz J.A., Bernal J.J., Moriones E., Aranda M.A.; RT "Nucleotide sequence and infectious transcripts from a full-length cDNA RT clone of the carmovirus Melon necrotic spot virus"; RL Arch. Virol. 148(3):599-607(2003). XX RN [2] RP 1-4271 RA Diaz J.A., Bernal J.J., Moriones E., Aranda M.A.; RT ; RL Submitted (14-JUN-2002) to the INSDC. RL Laboratorio Virologia, Consejo Superior de Investigaciones Cientificas, RL Estacion Experimental La Mayora, Algarrogo-Costa, Malaga 29750, Spain XX DR MD5; 42221ca008ad2aff7a9a1b703a0c6b56. DR EuropePMC; PMC2885689; 20507975. DR EuropePMC; PMC3163571; 21812964. DR EuropePMC; PMC4337425; 24372390. DR EuropePMC; PMC5712577; 29238357. DR EuropePMC; PMC5954562; 29868081. DR EuropePMC; PMC6309106; 30622528. XX FH Key Location/Qualifiers FH FT source 1..4271 FT /organism="Melon necrotic spot virus" FT /isolate="Malfa5" FT /mol_type="mRNA" FT /db_xref="taxon:11987" FT CDS 85..2460 FT /codon_start=1 FT /transl_except=(pos:889..891,aa:OTHER) FT /product="p89" FT /db_xref="GOA:Q8JMI2" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q8JMI2" FT /protein_id="AAM83188.1" FT /translation="MDTGLKVLVNGGLATSSVFRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCNKIVKVASIIGIGYLGLRVGAAWCRRSPSVANSIISYGEEVVEQVKVDIDR FT DAEEESDTGEEIVVGSIGIGIHTNINPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLSHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS FT VRRGTHPDMTEFPQDRPIKTRKLYCLGGVGTSVKFNVHNNSLANLRRGLIERVFFVEND FT KKDLEPAPRPISGAFDRLTWFRRKLHNIVGTHSSISPGQFLDFYTGRRRTIYEGAVKSL FT EGLSVQRRDAYLKTFVKAEKINTTKKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRG FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSTDALKWEHNVY FT LDAFCHDSYLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH FT DFFRSRGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEIFEQIE FT FCQMRPVFDGEKYVMVRNPLVSLSKDSYSVGPWNGINHARKWVNAVGLCGLSLTGGIPV FT VQSYYNMMIRNTQSINSSSILRDVSFASGFRELARLGNRKSSAISENARFSFYLAFGIT FT PDLQRAMESDYDAHTIDWGFVPQGNPRIQPISWTLNEL" FT CDS 85..891 FT /codon_start=1 FT /product="p29" FT /db_xref="UniProtKB/TrEMBL:Q8JMI1" FT /protein_id="AAM83189.1" FT /translation="MDTGLKVLVNGGLATSSVFRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCNKIVKVASIIGIGYLGLRVGAAWCRRSPSVANSIISYGEEVVEQVKVDIDR FT DAEEESDTGEEIVVGSIGIGIHTNINPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLSHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVN" FT CDS 2439..2636 FT /codon_start=1 FT /product="p7A" FT /db_xref="GOA:Q8JMI0" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q8JMI0" FT /protein_id="AAM83190.1" FT /translation="MDPQRTVEQTKPRGRSKDRDDSGGKQKNSMGRKIANDAISESKQG FT VMGASTYIADKIKVTINFNF" FT CDS 2640..2825 FT /codon_start=1 FT /product="p7B" FT /db_xref="GOA:Q8JMH9" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:Q8JMH9" FT /protein_id="AAM83191.1" FT /translation="MACYHCDSSPGDYSGALLILFISFVLFCITSLSPQGNTYVHHFDN FT SSIKTQYVGISTNGDG" FT CDS 2812..3984 FT /codon_start=1 FT /product="coat protein p42" FT /db_xref="GOA:Q8JMH8" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8JMH8" FT /protein_id="AAM83192.1" FT /translation="MAMVKRINNLPTVKLAKQALPLLADPKLVNKAIDVVPLVVQGGQK FT LSKAAKRLLGAYGGNISYTEGARPGTISAPVAISRRVAGMKPRFVRSEGSVKIVHREFV FT ASVLPSNDLTVNNGDVNVGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRITYIPTTGS FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSSPWAENVLVVPCDNIWRYMNDTNAV FT DRKLVDFGQFLFATYSGDGVTAHGDLYVEYAVEFKDPQPIAGIVCMFDRSVSFSEVGST FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNATSIGSLTFTGNSKPVGNSLNVT FT SSGASALTFTLNSTGIPNSSNSSFSVGTVVALTRVRMTITRCSPETAYLA" XX SQ Sequence 4271 BP; 1067 A; 886 C; 1062 G; 1256 T; 0 other; ggatatctct agccggatcc ccgactctct tgtttctgtg agattgttcg cgtgcctgtt 60 tattttcttt ggcataggtt agcaatggat actggattga aagttcttgt taatggaggt 120 ttagccacct cgtctgtttt tcggaaagtg agtgctgtga gttcattgga ttcgtccctc 180 ccctcatcgt caatactgtc agccattcat gggtcttgga ctagtgctat cagccacgat 240 tgcaataaga ttgttaaggt tgcttctatt attggtatcg gctacctcgg gttgcgcgtt 300 ggtgccgctt ggtgtcgtcg ctcccccagt gttgccaatt ccattatatc atatggggaa 360 gaagtggttg agcaagtaaa ggttgacatt gatagggatg ctgaggaaga gtccgatact 420 ggtgaggaaa ttgtggttgg ttcgatcggc attggaatac ataccaatat caacccagag 480 gttcgagcta agcgaaggca tagatcaagg ccgttcatta agaagatcgt gaatctgacc 540 aaaaatcatt ttggagggtg ccctgattct agcaaatcga acgttatggc tgttagcaag 600 tttgtttatg agcaatgtaa gcagcacaat tgtcttccac atcaaacgag attgatcatg 660 agtatagcag ttccattggt attgagtccc gatatgtatg atatttctag caaggctctg 720 ttgaatagcg agatattgac agagaacaga gctacgctgg accgcctcaa aactctcgat 780 gggtggctgt cacatttggt gtgccatccc ttaagcgcta aggcttggag gcgggctatt 840 gacaacttgt gtggtcttcc ggactggaag gctttcaagt tggtcaacta ggggtgccta 900 gaggaactcg ctgggttctg tacttcggta cggaggggga cgcacccaga catgaccgag 960 tttcctcagg atcgtcccat caaaacacgc aaactgtatt gtctaggggg agttggaact 1020 agcgtgaagt tcaacgtgca taataactct cttgccaacc ttcggcgcgg tctcatagaa 1080 cgcgttttct ttgttgaaaa tgataagaag gaccttgagc ctgcccctag accaattagt 1140 ggtgcttttg atcgcttgac ctggtttcgc agaaagctac ataatattgt gggtactcat 1200 tccagtatta gtcctggtca attcttggac ttttatactg gcaggaggcg cactatatat 1260 gagggcgctg tcaaatcgtt ggaggggttg agtgttcaac gaagagatgc ttatttgaaa 1320 acatttgtca aagcggagaa gattaacacc actaagaaac ctgacccagc tccgcgggtc 1380 atacaaccga ggaatgtacg ttataatgtt gaagttggtc ggtatctacg taggtttgag 1440 cattacctct atagaggaat tgacgaaatt tggaatgggc ccactattat aaagggatac 1500 actgtcgaac agattggtaa gatagcccgt gacgcatggg attcattcgt gagtccggtt 1560 gctattggat ttgatatgaa acggttcgat cagcatgtat ccaccgacgc tcttaaatgg 1620 gaacataatg tttatcttga tgccttttgc catgattcgt acttagctga gttattagaa 1680 tggcaattgg tcaataaggg tgttgggtac gccagtgatg gaatgatcaa atataaggtt 1740 gacgggtgtc gtatgagtgg tgatatgaat acagctatgg gtaattgtct gattgcttgt 1800 gctatcacac atgatttctt tcgtagtcgt ggtatcaggg cgcgtttgat gaacaatggt 1860 gatgattgcg ttgtaatatg tgaaaaggaa tgtgccgcgg tggtcaaagc cgacatggta 1920 aggcactgga gacaattcgg gtttcagtgt gaactcgagt gcgacgcaga aatctttgaa 1980 cagattgaat tttgtcagat gcgacctgtg ttcgatggtg agaagtatgt gatggtacgg 2040 aatccgttag ttagcctatc aaaagactcc tactcagtcg gtccctggaa cggaatcaac 2100 catgcacgca agtgggttaa tgctgttggc ttgtgtggct tatccctcac tggtggaata 2160 cctgttgtcc agagttatta taatatgatg atccgaaaca cccagtccat taacagctct 2220 agcatacttc gtgatgttag ctttgctagt ggatttcggg agttggctcg gttgggcaat 2280 aggaaaagta gtgccatttc tgaaaacgcc cgttttagct tttatctcgc gtttggcatt 2340 actccagatt tacaacgtgc catggaaagt gactatgatg ctcataccat tgactggggt 2400 ttcgtgcccc agggaaatcc tagaatacag ccaatctcat ggaccctcaa cgaactgtag 2460 aacaaactaa acctcgggga agaagtaaag atcgtgatga tagtggggga aaacagaaga 2520 attcaatggg gcgaaagata gccaatgatg ctatctctga atcgaagcag ggagttatgg 2580 gggcgagcac atatattgcc gacaaaatta aagttaccat aaactttaat ttttaatata 2640 tggcttgtta ccactgtgac tccagccccg gggattactc tggagcattg cttatactat 2700 ttatctcatt cgtcttattc tgcattacct cgcttagccc gcaaggaaat acttacgttc 2760 atcacttcga taattcttcc attaaaacac aatacgttgg catctctacc aatggcgatg 2820 gttaaacgca ttaacaattt accaacagtg aagcttgcta aacaggccct acctctctta 2880 gctgatccaa aattagtgaa caaagctatt gatgtggttc ctttggtagt ccaaggtggt 2940 cagaaattgt ctaaagctgc caagcggttg cttggtgctt acggaggcaa catttcttac 3000 actgagggcg ccagacccgg taccatttcc gcccccgtcg ccattagtcg ccgagtggcg 3060 ggcatgaagc ccaggtttgt tagatctgaa ggatctgtga agatagttca tagggaattt 3120 gttgcttctg ttcttccgtc taatgacctc actgttaata atggtgacgt caatgttggg 3180 aagtataggg tcaatcctag taataatgct ctgttcacat ggcttcaggg acaagcgcaa 3240 ttgtatgata tgtacagatt cacccgctta cgaatcacct atataccaac caccggttct 3300 acttccacag gccgagtctc tatcctctgg gatagagatt ctcaggaccc gcttccaatt 3360 gatcgtgcgg ccattagctc ttatgctcat tatgccgatt cgtcaccctg ggctgagaat 3420 gtcctggtgg tgccgtgcga caatatatgg aggtacatga atgataccaa tgctgtagac 3480 cgaaagttgg ttgattttgg gcaatttctc tttgcgactt attctggtga tggtgtcact 3540 gcccatggtg atctctatgt cgaatacgct gtcgagttta aagacccaca gccaatagcc 3600 gggatagttt gtatgtttga ccgttcggtg tccttctctg aagtcggatc caccatcaag 3660 ggggtgaatt atattgctga tcgcgacgtg ataactactg ggggcaatat tggtgttaac 3720 atcaatattc ccgggaccta tctcgttacg attgtattga atgccacctc gattggttct 3780 ctcaccttca ctggaaattc taaacctgta ggcaacagtc ttaacgtcac tagtagcgga 3840 gcgtctgctt tgaccttcac tctcaattcc accggcattc ccaacagtag taactcatca 3900 ttctcagttg gtactgtcgt ggctttgacg agggttcgca tgacgatcac tcggtgttct 3960 cccgaaactg cctacctcgc ctaattataa atctctttgt atactctcca agtttgttcc 4020 tttttattcc tacttgttct cagccagatc tctgttctgg tgtcttatag atttccctgt 4080 tgtgtgtagt gcggtctggc taaccgtaac ggcgtatcgg caaggatttt cgatgattag 4140 gttccaggat gtacgacata gctgaagata gatggagttt gaaggatcac cgctagcaaa 4200 atacactctg tgtggggcgt gctggtggat agtcatgtaa gtttgagatg ggttttcggc 4260 ccatcccgcc c 4271 //