ID AY121833; SV 1; linear; mRNA; STD; VRL; 6161 BP. XX AC AY121833; XX DT 24-OCT-2002 (Rel. 73, Created) DT 24-OCT-2002 (Rel. 73, Last updated, Version 1) XX DE Foxtail mosaic virus, complete genome. XX KW . XX OS Foxtail mosaic virus OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6161 RA Chang C.-Y., Hsu Y.-H.; RT "Construction of chimeric viruses between Bamboo Mosaic Potexvirus and RT Foxtail Mosaic Virus to extend the Host Range of Satellite RNA of Bamboo RT Mosaic Potexvirus"; RL Unpublished. XX RN [2] RP 1-6161 RA Chang C.-Y., Hsu Y.-H.; RT ; RL Submitted (13-JUN-2002) to the INSDC. RL Graduate Institute of Biotechnology, National Chung Hsing University, No. RL 250, Guoguang Rd., Nan Chiu, R.O.C., Taichung 402, Taiwan XX DR MD5; 9fe3f448f58e81269ee93456b1131402. XX FH Key Location/Qualifiers FH FT source 1..6161 FT /organism="Foxtail mosaic virus" FT /mol_type="mRNA" FT /db_xref="taxon:12179" FT CDS 81..4088 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="ORF1" FT /db_xref="GOA:Q8BB03" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q8BB03" FT /protein_id="AAN46894.1" FT /translation="MSIEAVFDQVTDPSLRAVIQEEAHKQIKDLFKETTRCNPYAIPQA FT GRKVLEKYAIPYNPYSLKLHPHAASKAFEVSLYEAASNYLPSTSSTPVTFMFTKPGKLR FT FFRRRGHVDKFVNADIVPRDLARYPRDTVYSYLPEITTTHAFIGDTLHHFGEDFLVEVF FT SRSPKLEVLLATMVLPPEAFYSMESLHPSVYTLLYRDDRFLYLPGGLSGGEYEHRYKDL FT NWLTFGTVTHGGITITGERIETKAANHLFLFRRGRLATPKFRSFDMPEPMVLLPKVFRP FT AKYNVQKPIPREKANKWLMYVKSIGNATIRDVWAKLRQTIANADIGLFSPTELVHLTNY FT FLLLGRLDSHNSFDQVLGDSVLKDGFRPMVANVQEIKHKLMGETQFMQLCQALEMTEVD FT LVFEVRDSKTPHKQAVPLDREIENVLLEGVSSEPTYTETEGVADGPLPPPMQTAAEPSA FT TSDEPESSSSREIEHQPAPEITLDAEEPQRDDLPWDAWKTQLRALGFEASERQYDPDGE FT LISPILSTRRLPKTPIDTTLYATLDKIARCPTFYKPDTDRAQTYARDVMAGKTGAILKQ FT QPFEWKTTLKRKTKEEPKKIHLAVLHGAGGSGKSYALQEFMRNNPDTPITVILPTNELR FT ADWKKKLPAHDKDTFMTYENALLCPRGDIFIMDDYTKLPRGYIEAFVQNAPALSLLILT FT GDPNQAEHFETTEDNEINDLAPASGVFGKFSRHHINATHRNPRNLANALGVYSETPGEV FT KVLYTRNIRTGYHNLVPSQMKMRNYASLGERASTYAGCQGITAPRVQIILDSDTPRCTR FT QGMYTALSRATTEGGLCNTMPDEKSFFQKGEATPYLKAILNLNKEIKVTEGDLTEEPPR FT EPAPPTTHLPVENRIILNEALVEPLPDKYDREIYSNSTGFSNCIQTQDPYIQAFQHQQA FT KDETLFWATVEKRLAASTPKDNWTEFKTKRPLGDVLWLAYKRAMELPDEPIKFNPELWW FT ACADEVQKTYLSKPIHALKNGILRQSPDFDWNKLQIFLKSQWVKKIDKIGKIDVNAGQT FT IAAFYQPTVMLFGTMARYMRRIRDTYQPGDILINCEKNQKHISKWVESNWNHRLPAYTN FT DFTAYDQSQDGAMLQFEVLKALHHDIPHEVVEAYVALKLNSKMFLGTLAIMRLTGEGPT FT FDANTECNIAYTHARFEIPKNVAQMYAGDDCALNCRPVERQSFLPLVEKFTLKSKPKVF FT EQKGGSWPEFCGNLITPRGYLKDPMKVQHCLQMGQRKKPSEPGSLKDVAENYAMDLLPT FT YELGDALYEIFDERQMNAHYQSVRTLITCAHTKVLRVAQALQEDCTLFSSI" FT CDS 4132..4842 FT /codon_start=1 FT /product="26K protein" FT /note="ORF2" FT /db_xref="GOA:Q8BB02" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q8BB02" FT /protein_id="AAN46895.1" FT /translation="MDSEIVERLTKLGFVKPSHTHIAGEPLVIHAVAGAGKTTPLRSLL FT EFPGVEVFTGGEHDPPNLSGKYIRCAAPPVAGAYNILDEYPAYPNWRSHPWNVLIADNL FT QYKEPTARAHYTCNRTHRLGQLTVDALRRVGFDITFAGTQTEDYGFQEGHLYTSQFYGQ FT VISLDTQAHKIAVRHGLAPLSALETRGLEFDETTVITTKTSLEEVKDRHMVYVALTRHR FT RTCHLYTAHFAPSA" FT CDS 4775..5158 FT /codon_start=1 FT /product="11K protein" FT /note="ORF3" FT /db_xref="GOA:Q8BB01" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q8BB01" FT /protein_id="AAN46896.1" FT /translation="MSLSQGTGAPAISTPLTLRPPPDNTKAILTVAIGIAASLVFFMLT FT RNNLPHVGDNIHSLPHGGSYIDGTKSINYRPPASRYPSSNLFAFAPPILAAVLFFLTQP FT YLATRRSRCVRCFVVHGACTNHT" FT CDS 5140..5298 FT /codon_start=1 FT /product="6K protein" FT /note="ORF4" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q774A9" FT /protein_id="AAN46897.1" FT /translation="MHESHLVVILALLLIALWCLSTRPVQPSCHVEINGHSIIVTGNCW FT HSTQRPH" FT CDS 5372..6028 FT /codon_start=1 FT /product="coat protein" FT /note="ORF5" FT /db_xref="GOA:Q8BB00" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q8BB00" FT /protein_id="AAN46898.1" FT /translation="MATQNADVTDATDYKKPPAETEQKALTIQPRSNKAPSDEELVRII FT NAAQKRGLTPAAFVQAAIIFTMESMDKGATDSTIFTGKHNTFPMKSLALACKDAGVPVH FT KLCYFYTKPAYANRRVANQPPARWTNENVPKANKWAAFDTFDALLDPYVVPSSVPYDEP FT TPEDRQVNEIFKKDNLSQAASRNQLLGTQASITRGRLNGAPALPNNGQYFIEAPQ" XX SQ Sequence 6161 BP; 1662 A; 1835 C; 1420 G; 1244 T; 0 other; gaaaactctt ccgaaaccga aactgactga aactacctcg accgacctta gaacccaaga 60 accctacggg tgcggccact atgtctatcg aggcagtttt cgaccaggtt accgacccat 120 cgctccgcgc tgtgattcag gaggaagcgc acaaacagat caaagattta tttaaggaaa 180 cgacgcgctg caatccctac gccataccgc aagctgggcg caaggttttg gagaagtacg 240 ccatccccta caacccgtac tctctcaaac tacaccctca cgcagcctca aaagcgtttg 300 aagtgtcgct ctacgaggct gcatctaact acctcccctc cacctcctca actcccgtca 360 cattcatgtt cacaaaaccg ggcaagctca gattcttcag gcgccgaggt cacgtggaca 420 aattcgttaa tgctgacata gttccaagag acttggctag atacccacgc gacacagtct 480 acagttatct gcccgagatc accaccacac acgctttcat tggcgacacc ctacatcact 540 tcggtgagga ctttctcgtc gaggttttct ccaggtcacc gaaactagaa gtgcttctag 600 ccaccatggt attaccaccc gaagcctttt acagcatgga gtcccttcat ccctcggttt 660 acactctcct ctacagggac gaccgattcc tatacctgcc tggtggcctg tctggcggtg 720 agtacgaaca tcgctataag gacctaaact ggctaacatt tggcacagtt acgcacggcg 780 ggatcactat cacaggagaa cgcattgaga ctaaggccgc gaatcatctt ttcctcttca 840 gaagagggcg actggcgaca ccaaaattcc gctcattcga tatgcccgag cctatggtcc 900 tgcttcccaa ggttttccgc cccgcaaagt acaatgtgca gaagccgatt ccccgggaga 960 aagcaaacaa atggttgatg tacgttaaat ccatcggcaa tgccaccatt cgtgacgtat 1020 gggctaagct gaggcaaacc atagccaatg cagacattgg actcttctcg cccacggagc 1080 tcgtgcatct cacgaattac ttcctgctcc tggggcggct tgactcacac aactccttcg 1140 accaagtact gggcgacagt gtgctgaaag atgggttcag accaatggtc gcgaacgttc 1200 aggagatcaa gcacaaactc atgggggaga cccaattcat gcaactctgc caagcgctag 1260 agatgacgga ggtggaccta gtctttgagg tccgggactc caagactccc cacaaacaag 1320 ctgtgccgtt ggaccgtgaa attgaaaacg ttttgttgga aggagtctca tcggagccaa 1380 cttacactga aaccgaaggc gttgctgatg gtccacttcc ccccccaatg caaactgcag 1440 ccgagccgtc cgcgacctca gacgagcccg agagctctag ctcgcgtgaa attgagcacc 1500 aaccggcgcc tgagatcacg cttgacgcgg aagaacctca gcgagacgat ctgccttggg 1560 acgcttggaa aacacaattg agggcgcttg gcttcgaggc ctccgaaagg cagtatgacc 1620 cggacggtga actgatctct cctatcctga gcacccgaag gttgcctaaa actcccatag 1680 acacaacact ctacgccacg ctagacaaga ttgcacgctg cccaactttc tacaagcctg 1740 acacagatcg cgcgcagact tacgctcgcg atgtcatggc ggggaaaacc ggtgccattc 1800 tcaagcaaca accctttgag tggaaaacca cgctcaagcg caaaactaaa gaggaaccga 1860 agaaaattca ccttgcggtg ttgcatggtg cgggcgggtc gggcaaatcc tacgcactgc 1920 aggaatttat gcggaacaac cctgacacac caattacggt catcctgccg actaacgagc 1980 tcagggccga ctggaagaaa aaattgcccg cccacgacaa agacacattt atgacatacg 2040 aaaacgcgct cttgtgccct cgtggagaca tcttcattat ggacgattac acaaaattgc 2100 ccaggggcta cattgaggct ttcgtgcaga atgcacctgc cctctcactt ctgatactca 2160 ccggtgaccc caaccaagcc gaacactttg agaccactga ggacaatgaa attaacgacc 2220 tcgcccccgc ctcaggggtc ttcggcaagt tctctaggca ccacataaat gccacacacc 2280 gcaaccccag aaacttggca aacgccctcg gggtttactc cgagacgccc ggggaggtta 2340 aagtgcttta cacgaggaac atcaggaccg gttatcacaa tctcgtgccc tcacaaatga 2400 agatgagaaa ttacgcctca ctcggggagc gagcgtccac ctatgcgggg tgtcagggga 2460 tcaccgcgcc ccgcgttcaa atcatcctag actccgacac accccggtgc accaggcaag 2520 gcatgtacac tgcactctca agggccacga cggaaggggg gctctgcaac acgatgccgg 2580 atgagaaaag cttcttccag aagggtgaag caacaccgta cctcaaagcc atcctcaacc 2640 tcaacaaaga gattaaagtc actgagggtg acttgacaga agaaccgccg agggagcccg 2700 ctcctcccac cacgcacctg cctgttgaaa acagaattat tcttaatgag gccctagtcg 2760 aaccgctgcc cgacaaatat gaccgcgaga tctactccaa ctccactggc ttttcaaact 2820 gcatacagac tcaagacccg tacatccaag ccttccaaca tcagcaagcc aaggacgaga 2880 cattgttctg ggcaaccgtc gagaagaggc tcgcagcatc tacgccgaag gacaactgga 2940 cagaattcaa gaccaagaga cctctgggtg acgtgctttg gctcgcgtac aagcgggcga 3000 tggagctccc agatgagccc atcaagttta acccagagct ctggtgggca tgtgcagatg 3060 aggtgcaaaa gacctacctc tccaagccca tacacgcact caagaacgga attcttcggc 3120 agtcacccga ctttgactgg aacaaactgc agattttcct caagtcacag tgggttaaga 3180 aaattgacaa aatcgggaaa attgacgtca acgctggaca gacaattgcc gcattttacc 3240 aaccaaccgt tatgctgttt ggaaccatgg cgagatacat gcgccgcatc cgcgacactt 3300 atcaacccgg cgacatactc atcaattgcg agaagaacca gaagcacatt tcgaagtggg 3360 tcgagagcaa ttggaaccac cgcctacctg cttacaccaa tgacttcact gcttacgacc 3420 aaagccaaga cggggctatg ttacagtttg aggtactgaa agccctgcac catgatatcc 3480 ctcatgaggt tgtggaagcc tacgtagccc tcaaactcaa ctcaaaaatg tttctgggca 3540 cactggcgat tatgagatta actggtgagg gacccacctt cgacgctaac acagagtgca 3600 acatcgctta cacacacgcc cggttcgaga tcccaaagaa tgtggcgcaa atgtacgcgg 3660 gtgacgactg tgcgctcaac tgcaggcccg ttgaacggca gtccttcctg cctcttgtgg 3720 agaaattcac cctgaaatca aaacctaaag tatttgagca aaaaggtggg tcatggcctg 3780 agttctgcgg caatctgatc accccacggg gctacctcaa ggatcccatg aaggtacaac 3840 actgcctgca aatgggacag aggaagaaac catccgaacc tgggtcgctt aaagacgttg 3900 ctgagaacta cgctatggac ttgctaccta catacgagct aggtgatgca ctctacgaaa 3960 tcttcgacga gaggcaaatg aacgcgcact atcagtcggt caggacgctt atcacatgcg 4020 cccacaccaa agtcctccga gttgcacagg cacttcagga agactgcacc ctctttagct 4080 ccatctaaca ggttttgagt taggctacct cccctgacga attaaataac aatggatagt 4140 gaaatagttg aacgcctaac aaagcttggt ttcgtcaaac cttcacacac gcacatcgct 4200 ggcgagcccc tcgtgatcca cgctgttgct ggggccggta aaaccacccc tcttcggtcc 4260 ctccttgaat tccctggagt ggaagtcttc acaggcgggg agcacgatcc tccaaacttg 4320 tcagggaaat atatccgctg tgctgcaccc cctgtggccg gtgcatacaa cattcttgac 4380 gagtaccccg cgtacccaaa ttggcgatcg cacccctgga acgtcctaat cgccgacaac 4440 ctacaataca aagaacccac agctcgcgcc cactacacat gcaatcgcac tcaccgcctg 4500 gggcagctca ctgttgacgc tttgcgtagg gttggtttcg acatcacctt tgccggcacg 4560 cagactgaag actacggatt ccaggaaggc catctctaca ctagtcaatt ttacggacag 4620 gtcatttcac ttgacacgca ggcccataag attgctgtgc gccacggact tgcacccctg 4680 tccgctttag aaacccgggg gctggaattt gatgagacca ctgtgataac gactaaaacc 4740 tcgctggagg aagtgaagga caggcacatg gtctatgtcg ctctcacaag gcacaggcgc 4800 acctgccatc tctacaccgc tcactttgcg ccctccgcct gacaacacga aagccatact 4860 aactgtagct ataggaatag ccgcctccct cgtctttttc atgctcacac gcaacaatct 4920 gccacacgtt ggtgataaca tccactcact accccacgga ggcagttaca ttgacggtac 4980 caagtccatc aactaccgcc cacctgcgtc acgctacccc tcatctaact tattcgcttt 5040 cgctccacca atactcgccg cggtactctt tttcctcaca cagccatatc tagctaccag 5100 acgatccagg tgcgttcggt gcttcgttgt ccacggggca tgcacgaatc acacctagtt 5160 gttatattag cgctgttact tatagctctg tggtgtctaa gcactcgacc cgttcaacca 5220 tcgtgccatg tcgaaatcaa cggccactcc atcatcgtca ccggaaactg ctggcactcc 5280 actcaacgac cgcattgagg gtgttagggt aaccagcatc agtgaagaga aacaacccac 5340 ctcaagtgtg acctcatcat ttcaggacac aatggcaaca caaaatgccg acgtcactga 5400 tgcgacggac tacaagaaac cgcctgctga aactgagcag aaggcactca ccattcaacc 5460 acgatcaaac aaggcgccca gtgacgagga gttggtacgc atcatcaacg cggcgcagaa 5520 gcgaggcctc acacccgcgg cctttgttca agcagctata atcttcacca tggaatccat 5580 ggacaagggc gccaccgact ccacgatttt cacgggaaaa cacaacactt tcccaatgaa 5640 aagtctggcg ctagcttgca aagatgctgg cgtgcccgtg cacaaacttt gctacttcta 5700 taccaagccg gcttacgcga accgtagggt cgccaaccag ccgcctgctc gctggactaa 5760 cgagaatgtg cccaaagcta acaagtgggc ggctttcgac accttcgacg cacttctcga 5820 cccatacgta gtcccatcct ctgtaccgta cgatgagccc acgccagagg atcgccaagt 5880 caatgagatc ttcaagaagg acaatttgag tcaggcagca tccagaaacc aactcctagg 5940 aacgcaagcc tccatcacgc gcgggagact caacggcgca ccagcactac caaacaatgg 6000 gcagtacttc atcgaggcac ctcagtgatc agtagtatga taccaataaa taaatcgggc 6060 gaatccgcgc ctcctgacta tgggcaggtt tacggaccaa gctgtatcga gatacgacct 6120 aacagtaacg cagctaaggg gtgaatgcac acatcgctta t 6161 //