ID   AY090558; SV 1; circular; genomic DNA; STD; VRL; 2661 BP.
XX
AC   AY090558;
XX
DT   18-APR-2002 (Rel. 71, Created)
DT   31-AUG-2025 (Rel. 144, Last updated, Version 9)
XX
DE   Sida yellow mosaic virus-[Brazil] DNA-A, complete sequence.
XX
KW   .
XX
OS   Sida yellow mosaic virus
OC   Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes;
OC   Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus sidaflavamusivi.
XX
RN   [1]
RP   1-2661
RA   Fontes E.P.B.;
RT   "Molecular cloning of Sida Yellow Mosaic Virus: a new sida-infecting
RT   geminivirus from Brazil";
RL   Unpublished.
XX
RN   [2]
RP   1-2661
RA   Fernandes A.V., Mariano A.C., Galvao R.M., Zerbini F.M., Fontes E.P.B.;
RT   ;
RL   Submitted (19-MAR-2002) to the INSDC.
RL   Bioquimica e Biologia Molecular, Universidade Federal de Vicosa, Av PH
RL   Rolfs s/n, Vicosa, MG 36571.000, Brazil
XX
DR   MD5; 3293dde8336e466776339bbda721fbd8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2661
FT                   /organism="Sida yellow mosaic virus"
FT                   /segment="DNA-A"
FT                   /mol_type="genomic DNA"
FT                   /geo_loc_name="Brazil"
FT                   /db_xref="taxon:191463"
FT   rep_origin      join(1..30,2524..2661)
FT   gene            254..1009
FT                   /gene="AV1"
FT   CDS             254..1009
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein CP"
FT                   /protein_id="AAM12384.1"
FT                   /translation="MPKRDPSWRQMAGTSKVSRSSNFSPRGGGGPKPTRAFEWVNRPMY
FT                   RKPRIYRTIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVLYFRQDMDGRKYQAQEHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   gene            complement(581..862)
FT                   /gene="AC5"
FT   CDS             complement(581..862)
FT                   /codon_start=1
FT                   /gene="AC5"
FT                   /product="AC5"
FT                   /note="ORF5"
FT                   /protein_id="AAM12389.1"
FT                   /translation="MIVDLPKPLDQRLLIAGILSTRDLGIELVHDLETITKIVLHGCST
FT                   GLVVKHVEHLAEIHWCAIRSTVPDQPEHATVRVFLSLIFSSIHILPKI"
FT   gene            complement(1006..1407)
FT                   /gene="AC3"
FT   CDS             complement(1006..1407)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein Ren"
FT                   /protein_id="AAM12387.1"
FT                   /translation="MGFTHRGNSSLCLKQRMASISGEITNPLYFKIYHVEDLLYTTTRV
FT                   YHVQIRFNHNLRRALGLHKAFLNFQVWTTSLTASGTTYLIRFRQLVMMYLDQLGVITLN
FT                   NVLRAVYFATDRSYVRYVLENHEIKFKIY"
FT   gene            complement(1151..1543)
FT                   /gene="AC2"
FT   CDS             complement(1151..1543)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transactivator protein Trap"
FT                   /protein_id="AAM12386.1"
FT                   /translation="MLNSSSSTPPSIKPRHRAAKRRGTRRRRIDLACGCSIYVHINCSN
FT                   DGIHAPRELITVPQAENGVYIWGDNKSPVFQDIPRRGPVVHDDQSVPRTDTVQPQPQES
FT                   IGSPQGIPELPSLDDISDSFWNDLFD"
FT   gene            complement(1464..2540)
FT                   /gene="AC1"
FT   CDS             complement(1464..2540)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication associated protein Rep"
FT                   /protein_id="AAM12385.1"
FT                   /translation="MPSPRAFRINSKNYFLTYPKCSLTKEEALSQLKELNTPTSKKFIR
FT                   VSRELHEDGSPHLHVLIQFEGKYNCKNNRFFDLVSPSRSTHFHPNIQGAKSSSDVKKYV
FT                   EKDGDFIDFGVFQIDPRSARGGCQTANDTYAKVLNAQSAEQALQILKEEQPRDYVLHLD
FT                   KVQTHVQKLFKKAPEPWVPPFPLSSFTNVPDEMQEWADDYFGRGSAARPLRPMSLIVEG
FT                   DSRTGKDDVGSCISPHNYLSGHLDFNNRVYSNEVDYNVIDDVTPQYLKLKHWKELIGAQ
FT                   KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGVSYKEFLDKEENAGLKSWTLHNAKFIFLD
FT                   SPLYQTTTQSGEEERNSP"
FT   gene            complement(2126..2383)
FT                   /gene="AC4"
FT   CDS             complement(2126..2383)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="AC4"
FT                   /note="ORF4"
FT                   /protein_id="AAM12388.1"
FT                   /translation="MGALTSTCLSSSKGSTIARTTGSSTSSPLPGQHISIRTFRELRAR
FT                   QTLKNTWRKTETSLILEFSKSIHDQLEEVAKLPTIRMRKF"
XX
SQ   Sequence 2661 BP; 660 A; 621 C; 622 G; 758 T; 0 other;
     accggatggc cggcgcgatt ttcccccccc tcacgtggcg ctctggtggc cgctcgatct        60
     ctctctcccc cgctcccgag gagccccccc tgctcgcgcg atgttctcct ttaattcaaa       120
     ttaaaggatt taacttttgt ctgaccaatt atagtgcgcc tgaggagctt agataactgt       180
     gttaatactt ggtccctaag ttttatggcc cctataaaac taaagcaagc atgacgtcag       240
     tctttaattc gaaatgccta agcgggatcc ctcatggcgc cagatggcgg gaacctcaaa       300
     ggtaagccgc tcttccaatt tctctcctcg tggaggtgga ggcccaaaac ccactagggc       360
     ctttgaatgg gttaacaggc ccatgtacag gaagcccagg atatatcgga cgatcagaac       420
     gcctgatgtt cctagaggct gtgaagggcc ctgtaaggtc cagtcctacg agcaacgtca       480
     cgatatttcc catgttggga aggtgatgtg tatatctgat gtgacacgcg gtaacggtat       540
     tactcaccgt gtcggtaagc gtttctgtgt taagtctgtg ttatatttta ggcaagatat       600
     ggatggacga aaatatcaag ctcaagaaca cacgaacagt tgcatgttct ggttggtccg       660
     ggaccgtaga ccgtatggca caccaatgga tttcggccag gtgttcaaca tgtttgacaa       720
     cgagcccagt actgcaaccg tgaagaacga tcttcgtgat cgtttccagg tcatgcacaa       780
     gttctatgcc aaggtcacgg gtggacagta tgccagcaat gagcaggcgc tggtcaagcg       840
     gttttggaag gtcaacaatc atgtggtcta caatcaccag gaagctggca agtacgagaa       900
     tcacacggag aacgcattgc tactttatat ggcatgtacc catgcctcta accctgtgta       960
     tgcaacgctc aagattcgaa tctatttcta cgattcgatc acgaattaat aaattttgaa      1020
     ttttatttca tgattttcca gtacatatct gacatatgat ctgtcagttg caaaataaac      1080
     agctctaagt acattattaa gcgtaataac gcctaattgg tctaaataca tcatgactaa      1140
     ctgtctaaac ctaatcaaat aagtcgttcc agaagctgtc agagatgtcg tccagacttg      1200
     gaagttcagg aatgccttgt ggagacccaa tgctctcctg aggttgtggt tgaaccgtat      1260
     ctgtacgtgg tacactctgg tcgtcgtgta caacaggtcc tctacgtggt atatcttgaa      1320
     atacagggga tttgttatct ccccagatat agacgccatt ctctgcttga ggcacagtga      1380
     tgagttccct cggtgcgtga atcccatcgt tgctgcagtt gatgtggacg tatatggagc      1440
     acccgcacgc tagatcaatc cttctacggc gagttcctct cctcttcgcc gctctgtgtc      1500
     gtggtttgat agagggggga gtcgaggaag atgaatttag cattgtggag tgtccacgac      1560
     tttagacctg cattctcctc tttgtcgagg aactctttat aactgactcc ctccccagga      1620
     ttgcagagca cgattgatgg gattccacct ttaatttgaa ctggctttcc gtacttacaa      1680
     tttgactgcc agtctttttg agcaccaatc agctccttcc agtgctttaa ctttagatat      1740
     tgcggagtga catcatcaat gacgttataa tccacttcgt ttgagtaaac cctattattg      1800
     aagtccagat gtccacttaa gtaattatgt gggctaatgc acgagcccac atcgtctttc      1860
     cctgtccttg aatcaccttc cactatcaaa ctcataggtc tcaatggccg cgcagcggaa      1920
     cccctcccaa aataatcatc cgcccactct tgcatctcgt cgggaacgtt agtgaaggag      1980
     gagagtggaa acggaggaac ccacggctcc ggagcctttt tgaataactt ctggacatgc      2040
     gtttgtactt tatccagatg taagacgtaa tccctcggtt gctcttcttt caaaatctgc      2100
     aatgcttgtt ccgcagattg agcatttaga actttcgcat acgtatcgtt ggcagtttgg      2160
     caacctcctc tagctgatcg tggatcgatt tggaaaactc caaaatcaat gaagtctccg      2220
     tctttctcca cgtatttttt aacgtctgac gagctcttag ctccctgaat gttcggatgg      2280
     aaatgtgttg acctggaagg ggagacgagg tcgaagaacc tgttgttctt gcaattgtac      2340
     ttcccttcga actggataag cacgtggagg tgagggctcc catcttcgtg caattccctt      2400
     gaaacacgga tgaatttctt actggtaggg gtgttcaact ctttcaattg ggaaagtgct      2460
     tcctctttgg tcaaggagca cttgggatat gtaagaaaat agtttttgga atttattcta      2520
     aaggcccttg gagaaggcat atttgcagaa atgaactggg gtctcggcaa ctctgtgata      2580
     tgaactgggg actggggtct tatttatagc agactccata taatttttga tggacacgtg      2640
     gcggccatcc gctataatat t                                                2661
//