ID   AY089993; SV 1; linear; genomic RNA; STD; VRL; 1782 BP.
XX
AC   AY089993;
XX
DT   18-APR-2002 (Rel. 71, Created)
DT   04-DEC-2003 (Rel. 78, Last updated, Version 2)
XX
DE   Gremmeniella abietina RNA virus MS1 putative replicase gene, complete cds.
XX
KW   .
XX
OS   Gremmeniella abietina RNA virus MS1
OC   Viruses; Riboviria; Partitiviridae; Gammapartitivirus.
XX
RN   [1]
RP   1-1782
RX   DOI; 10.1007/s00705-003-0194-6.
RX   PUBMED; 14648287.
RA   Tuomivirta T.T., Hantula J.;
RT   "Two unrelated double-stranded RNA molecule patterns in Gremmeniella
RT   abietina type A code for putative viruses of the families Totiviridae and
RT   Partitiviridae";
RL   Arch. Virol. 148(12):2293-2305(2003).
XX
RN   [2]
RP   1-1782
RA   Tuomivirta T.T., Hantula J.;
RT   ;
RL   Submitted (13-MAR-2002) to the INSDC.
RL   Forest Pathology, Finnish Forest Reseach Institute, Vantaa Research Centre,
RL   Jokiniemenkuja 1, P.O.B. 18, Vantaa FIN-010301, Finland
XX
DR   MD5; e3368bfb051f24a1dc9af349633ed21e.
DR   EuropePMC; PMC5086604; 27690081.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1782
FT                   /organism="Gremmeniella abietina RNA virus MS1"
FT                   /host="Gremmeniella abietina"
FT                   /isolate="C5"
FT                   /serotype="type A, LTT"
FT                   /mol_type="genomic RNA"
FT                   /country="Finland"
FT                   /db_xref="taxon:191436"
FT   CDS             63..1682
FT                   /codon_start=1
FT                   /product="putative replicase"
FT                   /note="RDRP"
FT                   /db_xref="GOA:Q8QMI1"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QMI1"
FT                   /protein_id="AAM12240.1"
FT                   /translation="MSEVDNTDPTLQDVAFVKSSGLDTTHLRSSEKTAGASYSVISSNF
FT                   NSPGLTEIARYGGYSVYSGNQNTDPWVRATLKNFSRETYEQIYGFTRQPEGVKGMYSSL
FT                   LKFSDGKCKFDRLNRVQRKAMIGAIAKAKKAFRLPYKSEPLDWHQVGAHFRRDTAAGVS
FT                   FMGKKKGEVMEEIYHEARWLGHRLKQNGKARFDPRQMRFPPALAGQRGGMSKRDAPKTR
FT                   LVWVYPAEMLVVEGQYAPVMYRAFMDQPDTPMLTGASSQRLYTEWLVGRREGETLHGLD
FT                   FSSFDTKVPSWLIRVAFDILRQNIEWETWQGEKVSKRDRQKWRNVWDGMVWYFINTPIL
FT                   MPDGRMFRKRRGVPSGSWWTQMVDSVVNYILVEYLTECQGVEARGLRVLGDDSAFRSPV
FT                   EFSLEQAQSDCEPTGMILKPEKCEKTEDPSDFKLLGTTYRGCHPHRDTNEWFKLALYPE
FT                   SRVGNLEVSLSRLVGLWIGGAMWDKEFCSYMDYFQSSYPCPTEGWFSKDQRRWLSIVYG
FT                   GKAPRGWGDKKSLFWRSIFYTF"
XX
SQ   Sequence 1782 BP; 433 A; 415 C; 476 G; 458 T; 0 other;
     cgcaaaatat acgatatttt tattcacgtt tgcgtgattt tcgcctcctt catttcagtg        60
     tcatgtccga agttgacaac actgatccaa ctctacaaga tgtagccttt gtgaagtcca       120
     gtggtctgga cacaacacac cttcggtcat cggagaaaac cgctggtgca agctactctg       180
     tgataagtag caacttcaac tctcctggtc taactgaaat cgcgcgctac ggcggttaca       240
     gtgtatactc agggaatcag aacactgatc cctgggttag ggccacactc aaaaactttt       300
     ctcgtgaaac ttacgagcaa atctatggat ttaccagaca gcccgaaggt gtcaagggaa       360
     tgtatagctc actgttaaag ttcagtgatg gcaagtgcaa gtttgatcgt ctcaaccgtg       420
     ttcaacggaa ggcgatgatt ggcgcaattg cgaaagcaaa gaaggcgttt cgtcttccat       480
     ataaatccga acctttggat tggcaccaag taggtgctca cttccgccgt gacacggcgg       540
     caggtgtttc tttcatgggg aagaagaaag gtgaggtgat ggaagagatt taccatgaag       600
     caaggtggtt aggtcaccgg ctcaaacaaa atggcaaagc tcgtttcgac ccgaggcaga       660
     tgcggttccc gcctgctttg gccggccaac gtggcggcat gtccaaaagg gatgcgccga       720
     agacacgttt ggtgtgggtt tatccggcag agatgctggt agttgaaggt cagtacgctc       780
     ctgtgatgta cagggcgttc atggaccaac cagatactcc gatgctcacc ggagccagct       840
     cacagcgctt gtataccgag tggctagttg gcagacgcga aggcgagact ctccatggtc       900
     tcgacttttc gagcttcgac accaaagtac cttcttggtt aatccgcgtg gcattcgata       960
     ttcttcgcca gaatattgag tgggaaacgt ggcaaggaga gaaggtgtca aaacgtgatc      1020
     gccaaaagtg gcgtaacgtt tgggatggta tggtttggta cttcatcaac acgcctatct      1080
     taatgcctga cggccgcatg tttcgcaaga gacgtggcgt gccttctggg tcgtggtgga      1140
     cccagatggt cgactcagtt gtgaattaca tcttagtcga ataccttaca gagtgtcagg      1200
     gtgtcgaagc acgtgggtta cgcgtgcttg gcgacgacag tgctttccgt tcaccggtcg      1260
     agttcagcct cgaacaagcg caatctgact gtgagccaac gggtatgata ctcaagcctg      1320
     agaagtgcga gaaaacagag gatccctctg acttcaaact gcttgggacg acataccgtg      1380
     ggtgccatcc tcatcgtgat acgaatgagt ggttcaagct cgctctgtac cctgagtctc      1440
     gagttggtaa tctcgaggtc tcattgtcaa ggctcgtcgg tctatggatc ggcggggcca      1500
     tgtgggataa ggagttctgc tcctacatgg attacttcca gtcttcctat ccgtgtccaa      1560
     cggaaggatg gttctctaag gaccaacgta gatggctgag catcgtctac ggaggcaagg      1620
     ctccaagagg atggggtgat aagaagtcac tcttctggcg ctccatcttc tatacttttt      1680
     aatgcgttta tcgttttctc cgactctctc gtcgttaact agaaccattt ctgtttatca      1740
     ggtggttgtg aaacaggtcc aacctgtgac tattaacaat ca                         1782
//