ID AY083351; SV 1; linear; genomic DNA; STD; VRL; 2630 BP. XX AC AY083351; XX DT 02-APR-2003 (Rel. 75, Created) DT 31-AUG-2025 (Rel. 144, Last updated, Version 10) XX DE Cotton leaf crumple virus - [TX] coat protein AV1, AC3, AC2, and DE replication associated protein AC1 genes, complete cds. XX KW . XX OS Cotton leaf crumple virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus gossypii. XX RN [1] RP 1-2630 RX PUBMED; 18943795. RA Idris A.M., Brown J.K.; RT "Cotton leaf crumple virus Is a Distinct Western Hemisphere Begomovirus RT Species with Complex Evolutionary Relationships Indicative of Recombination RT and Reassortment"; RL Phytopathology 94(10):1068-1074(2004). XX RN [2] RP 1-2630 RA Idris A.M., Brown J.K.; RT "Molecular characterization of cotton leaf crumple geminivirus"; RL Unpublished. XX RN [3] RP 1-2630 RA Idris A.M., Brown J.K.; RT ; RL Submitted (11-MAR-2002) to the INSDC. RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA XX DR MD5; f68e564633035f769321f7a047a53fcc. XX FH Key Location/Qualifiers FH FT source 1..2630 FT /organism="Cotton leaf crumple virus" FT /segment="A component" FT /host="cotton" FT /mol_type="genomic DNA" FT /geo_loc_name="USA: Texas" FT /db_xref="taxon:77647" FT CDS 194..949 FT /codon_start=1 FT /product="coat protein AV1" FT /protein_id="AAL96825.1" FT /translation="MPKRDAPWRLLSGTTKVSRNANYSPLRVLGPKINKASEWVNRPMY FT RKPRIYRTLRTPDIPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSIMN" FT CDS complement(946..1344) FT /codon_start=1 FT /product="AC3" FT /protein_id="AAL96828.1" FT /translation="MDSRTGELITAHQAENGVYIWEIINPLYFKIYGVEDLLYTRTRIY FT HIQIRFNHNLRRALHLHKAYLNFQVWTTSLTASGSTYLIRFKQLVMLYLDQLGVISLNN FT VIRAVRFATDKSYVSYVLENHAIKFKFY" FT CDS complement(1091..1480) FT /codon_start=1 FT /product="AC2" FT /protein_id="AAL96827.1" FT /translation="MLSSSHSTPPSIKKAHRQAKRRAIRRRRIDLNCGCTIYFHIGCTG FT HGFTHRGTHHCTSGREWRVYLGDNKSPLFQDIRSRGSAIHEDAYIPHPDPIQPQLTESV FT ASPQSLPELPSLDDFSDSFWVDLFN" FT CDS complement(1392..2471) FT /codon_start=1 FT /product="replication associated protein AC1" FT /protein_id="AAL96826.1" FT /translation="MPRNPDSFRLQARNIFLTYPKCDIPKNEALQMLQALSWSVVSPTF FT IRVAREEHSDGSPHLHCLIQLSGKPNIKNERFFDLTHPRRSTNFHPNIHAAKDANAVKN FT YITKDGDCCESGQFEVPRGTKNNKDDVYYNAINAPSVAEALEIIRAGDPRAFIVSYHNI FT KANLDRLFKKAPEQWVPPFPLSSFTNVPDEMQEWADGYFGLGPAARPVRPVSLIVEGDS FT RTGKTMWARALGPHNYLSGHLDFNHRVYSNNVAYNVIDDVSPHYLKLKHWKELLGAQKD FT WQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLDKAENASLKNWTIKNVIFITLDAP FT LYQEGTQASQEEGDQTTTN" XX SQ Sequence 2630 BP; 683 A; 542 C; 633 G; 772 T; 0 other; actgatggcc gcgcgatttt ggagccccct tttgtcgtta gcgcgacctt taatttaaat 60 taaagggtgc tttttactgt tgtccaatca ttttgcgtct gtctagccta gatattagca 120 acaacttcgc gactaagttg ttgaccgttg attataaatt actgggcatg tggcccaatg 180 ggtatagagc aaaatgccca aacgtgacgc cccatggcgg ttgttatcgg gtacgacaaa 240 ggtgagtcga aatgccaatt actctccact cagagtattg ggccctaaga ttaataaggc 300 ctctgaatgg gttaacaggc ctatgtatag gaagcccaga atctaccgca cgttaaggac 360 gcctgacatt cccagaggct gtgaagggcc atgcaaagtc cagtcttatg aacagcgcca 420 cgatatctca cacgtgggta aggtaatgtg tatatctgat gtcacacgtg gtaatggtat 480 cacccatcgt gttggcaagc gtttttgtgt taagtctgta tatattttag ggaaaatatg 540 gatggatgag aatattaagc tgaagaacca cacgaacagc gtcatgtttt ggctggttag 600 agatcgtaga ccatatggca cgcctatgga ctttggtcaa gtatttaata tgtttgacaa 660 tgagcccagt actgccactg tcaagaacga tctcagagat aggttccagg tcatgcacaa 720 gttttatgct aaggtaactg gtggacaata cgcgagcaac gagcaagcct tggtcaagcg 780 gttctggaag gttaacaatc atgtggttta caatcatcag gaagcaggga aatacgagaa 840 tcacacggag aatgcgttgt tattgtacat ggcatgtact catgcttcga atcctgtgta 900 tgcgacattg aaaattcgga tctattttta tgattcgata atgaattaat aaaatttaaa 960 ttttattgca tgattttcta gtacataact gacataggac ttatcagttg cgaaacgtac 1020 agctctaatt acattgttaa gtgaaatcac gcctaactgg tctaaataca acataaccaa 1080 ctgtttaaat ctaattaaat aagtcgaccc agaagctgtc agagaagtcg tccagacttg 1140 gaagttcagg taagctttgt ggagatgcaa cgctctccgt aagttgtggt tgaatcggat 1200 ctggatgtgg tatatacgcg tcctcgtgta tagcagatcc tctactccgt atatcttgaa 1260 atagagggga tttattatct cccagatata cacgccattc tctgcctgat gtgcagtgat 1320 gagttcccct gtgcgtgaat ccatgaccgg tgcagcctat gtggaagtat atggtgcacc 1380 cacagtttag atcaattcgt cgtcgtctga tcgccctcct cttggcttgc ctgtgtgcct 1440 tcttgataga ggggggcgtc gagtgtgatg aagataacat tcttgatggt ccaattttta 1500 agcgacgcat tttccgcctt atctaggaaa tctttatagc tggatccctc tcctggattg 1560 catagcacga ttgaagggat ccctccttta atttgaactg gtttcccgta cttgcaattt 1620 gattgccagt ctttttgggc cccaagaagc tctttccaat gctttagctt taggtaatgc 1680 ggtgatacgt catcaatgac gttataggca acattattcg agtacactcg atgattgaag 1740 tctaggtgtc cactaaggta attatgtggg cctaaagcac gagcccacat cgtcttgcct 1800 gttctcgagt caccttccac tatgagacta actggtctaa caggccgcgc agcgggaccc 1860 agtccaaaat aaccatccgc ccattcttgc atctcgtccg gaacgttagt gaaagaggaa 1920 agtggaaatg gagggaccca ttgttcaggc gcctttttga aaaggcggtc caagttcgct 1980 ttgatgttat ggtaactcac gatgaacgcc cttggatctc cggcccggat aatttcaaga 2040 gcttccgcca cactaggtgc attaatggcg ttataataga cgtcgtcttt attatttttt 2100 gttcccctag gcacctcgaa ctgtccggat tcacaacaat caccgtcttt ggtgatgtag 2160 ttcttgacgg cgttggcgtc tttggctgca tgtatgtttg ggtgaaaatt ggtagacctt 2220 ctggggtgag taaggtcgaa aaatctctca ttcttgatgt tgggcttacc agagagttgg 2280 atgagacagt gaaggtgtgg ggatccgtct gagtgttcct ctctggcaac tcgaatgaat 2340 gttggactga cgactgacca tgataaggct tgaagcattt gaagagcttc attttttggg 2400 atatcacact tgggataggt taagaaaata tttctggctt gtaaacgaaa agaatcgggg 2460 tttcgtggca tttttgtaat aatgccccag gactccggat ggagctctca aacttgagtg 2520 atatgttgtg gagtctggag tcccttatat atgtttaagc actagaaggc atttggggac 2580 tctctgggcc caccacgagg actccatacc gcggccatct atataatatt 2630 //