ID AY064708; SV 1; linear; genomic RNA; STD; VRL; 8126 BP. XX AC AY064708; XX DT 04-DEC-2002 (Rel. 74, Created) DT 01-APR-2011 (Rel. 108, Last updated, Version 4) XX DE Simian sapelovirus 1 strain 2383, complete genome. XX KW . XX OS Simian sapelovirus 1 OC Viruses; Riboviria; Picornavirales; Picornaviridae; Sapelovirus. XX RN [1] RP 1-8126 RX DOI; 10.1016/S0042-6822(03)00420-3. RX PUBMED; 14517081. RA Oberste M.S., Maher K., Pallansch M.A.; RT "Genomic evidence that simian virus 2 and six other simian picornaviruses RT represent a new genus in Picornaviridae"; RL Virology 314(1):283-293(2003). XX RN [2] RP 1-8126 RA Oberste M.S., Maher K., Pallansch M.A.; RT ; RL Submitted (30-NOV-2001) to the INSDC. RL Respiratory and Enteric Virus Branch, Centers for Disease Control and RL Prevention, 1600 Clifton Rd NE, Mailstop G-17, Atlanta, GA 30333, USA XX DR MD5; bec76c6c0743cc41bd9a687e1ce29fa4. DR EuropePMC; PMC1900287; 17392358. DR EuropePMC; PMC1949831; 17623054. DR EuropePMC; PMC2224395; 17942560. DR EuropePMC; PMC2533695; 18818738. DR EuropePMC; PMC2698906; 19473520. DR EuropePMC; PMC3119694; 21713005. DR EuropePMC; PMC3536389; 23097448. XX FH Key Location/Qualifiers FH FT source 1..8126 FT /organism="Simian sapelovirus 1" FT /strain="2383" FT /mol_type="genomic RNA" FT /note="common: SV2" FT /db_xref="taxon:1002918" FT 5'UTR 1..741 FT CDS 742..8031 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q8B552" FT /db_xref="InterPro:IPR000081" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR022539" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="UniProtKB/TrEMBL:Q8B552" FT /protein_id="AAL57904.1" FT /translation="MAIYEDDSSESITCCNWIPRNRRNKVRKQKPRSKASRVEMSPGPL FT VTLADDGYLYVHKHKGETKFVRRDEILTKYGRCIVEMEEVFQCGQVQSNQTGNKPSSGF FT IYGTGNSLTNINYYGSDYSQAYNPSQQQMDPSQFTKPVTEIAGSLKGPALKKPDTEESG FT YSDRLLQLTAGNSCITTQEAAKAVVAYGMWPTYNIDAGEALDLDTRPGPSCDRFYTFDS FT LNWQNTQYGEWTCPLPGALMDTGVFGQNLRFHYLYRSGFCVHVQVNASSFHQGCLLVAM FT VPEHQTPKQQNNDFQYYETKEFCGTEYPTEQLTLFPHQFLNLRTNNSVTIVYPYTNCTP FT SGFGLSHNFVTLVIRIVVPLSYSTGASTQIPITVSVAPMCSSFAGLRSAVKSQGIPVRQ FT IPGSSQFLTVQRDAGVPLYPEFQKTARFTLPGRVTNYMQVARVPTLMKMPNTMSDGTYL FT AVDVTQNIRTQAIGKWDMSLIGDLFKPTYLGRLAKMYANYRGSVIIEFMFCGSKMATGK FT FLVAYTPPGGSSPATREEAMLGTHVIWDIGLQSTCKFVIPYISTSVYRSSMLTNTTLSY FT DGWITMWYQTAIVVPPNCPSTCQIIGLVSASDNFVFRIPSDNKYYTNNVNISKSATVQG FT ESDSIPSALNAHIEQAVTSALNTRPQHSHDNGLEIIQGDAPALTAAESGETSDSSGQTS FT MELRESNAIFSIRETDIEYLYSRYFMFYEQDIVITTADLNKEMINKSFTFDAVAASDPA FT TTRWRAFTYWRFDLDVVVVIYPQIHNGTSPQSMTFQMMFSPPGCEVPEDYSSKVWLSPI FT NPTCITKIQDPPTSFRIPFLSVCNYYTSRYDGDGTFDPSDKQYGVNPGNFIGNLTIKMI FT NNVQPNFTGSYGVRIYVRPVNIEAYMPRPLLAYREGKVVEDYSRYTTGGARNLGLEYDV FT DIKSPIGDMWNVDDFDFLNMSPTDVLLERCFDVLSFSAQFDKGPFTAWWWKDDIIITSY FT HACNDWYAYLERKNPVFRYRISMSTKRWWKNPYLVEAVGVKQVWIDSFRDIAFIKVIPS FT SRIKARPGLLGENRVRHKNERKFEHCLCVTNSVVFPVRYTEYRFPQYCELLNFRDHQQR FT DLWSCVGDAEPGFCGSMLFSEGKVIGMLTAKSECTYADGQKKMTTFFTQLDTASFYRCV FT EITKKDCFYAVQHEPAEQCGLEDPFRCNTGYPDDLSEEEEEEDTPLTFPEAHYQGLYDW FT IHDMGISFGDGAGESFQRNVDEAIEKITPIVSQFKGGVEGFLKDKLFNSLFSILVKAIG FT SLVIYINAKDECKLSTLLALGSMLGVDFMSKDPFTYLYEKFTGCVQMQGPSDWLKDFNI FT ACNAFKGLEYIYQKLSTFFDWIRGLVKKSEDPARAEFHRMLEDWPEVMEKMDLIERNRK FT NYHDADVLEVCEFIVTLKKLADSYGVERNMATTQIVRYHAKAQKLAQSIRSSRYEPVAL FT CIHGSPGTGKSIATEIISRSLAQATDTQMPYSLPPDPKYFDGYSQQNVVVMDDLGQNPD FT GEDMSLFCQMVSTTAFIPPMASLEEKGMYFTSNFVCASTNCTSLKPPTVMEPAALHRRF FT FLDCDIIVNKDYAIDRKLDMSKCQKCLNCDKPENFKHCNPLICGKAILLQDRRTNVRYT FT LDKVVTIMLAESRRRRNILNVVDALFQGPSYEKPKLIRKQVVDKLLPEEVVEVLKEVPS FT EELIAKLKEKGYVFPIEVEVIRERSKVQKYLNWFTTVMSTLTTIVSFSTVVYMLVSVFA FT GKQGAYTGNIKPVMQKPVLRKAVVQGPDLEFAKSLMKSSLFPVCTSTGSYTALGLFDQW FT LVLPAHSNPKDSIVFKGESVKIVDSMLLESSRGNLELVVVKLDRTEKFRDIRKYLVENF FT HTEKECWLALNSDQFRDVYVPVGSVSLFGFLNLSMTPTYNTLKYNYPTKVGQCGGIVVK FT AGKILGMHIGGDGVSGYAAMLKKSYFSVCQGEIVHKESTKERGVKSINVKTKTGLYPSV FT FHDVFEGTKEPAALRPGDSRLKVDLNEALFSKYKGNKHISIPPETFIAIDHYVEQIRPL FT LPENLTEQLELEDVVYGIENLEGLDLNTSAGYPYNTMGIRKRDLIPHRGEPLTQLQKAL FT DLHGYDLPFSTYLKDELRPKAKVEAGKTRLIECSSLNDTIRMKRIFGRLFQTFHSNPGT FT CTGSAVGCNPDYHWSQFASEIGMDNICAFDYTNWDASLSPFWFDALKVFLVKLGYGEGA FT IDAIDHICYSSHIFKDQYYVVHGGMPSGCSGTSIFNSIINNLVVRTLVLKCYKGINLDL FT LRILAYGDDLLVSYPFPLDPAVLADAGKELGLTMTPADKSDSFSGCSKLTEVTFLKRSF FT VFDEQFPFLCHPVFPMSEIHESIRWTRSAATTQEHVTSLCLLAWHNGKEVYEEFCEKIR FT STPVGRALSLPSFEVLRYNWLDLF" FT mat_peptide 742..1005 FT /product="leader" FT /note="L" FT mat_peptide 1006..1206 FT /product="VP4" FT mat_peptide 1207..1920 FT /product="VP2" FT mat_peptide 1921..2643 FT /product="VP3" FT mat_peptide 2644..3495 FT /product="VP1" FT mat_peptide 3496..4401 FT /product="2A" FT mat_peptide 4402..4737 FT /product="2B" FT mat_peptide 4738..5736 FT /product="2C" FT mat_peptide 5737..6018 FT /product="3A" FT mat_peptide 6019..6081 FT /product="3B" FT mat_peptide 6082..6630 FT /product="3C" FT mat_peptide 6631..8028 FT /product="3D" FT 3'UTR 8032..8126 XX SQ Sequence 8126 BP; 2358 A; 1531 C; 1751 G; 2486 T; 0 other; ctcacactca tttcccccct cgcctgtcac aggcaacccc caccccttct cttacgggag 60 ttagggccaa ggatctgttg cataggcgtt gtatccccta accttttacc tacccatccc 120 aataggactg gtatttcggt tttgattgag taatggatac tgattctata cctgttaccc 180 attcagggga aaaatggagt ttctttcatg gatctgactt gatatgacca agagtcaaca 240 ctttgcgtgt tggccgtatg gaatgcttta aggtttattc tttggattat gacttcaggg 300 ttggccgccc aggataaaag gcaattgtgg taagtgatgt tagtcattgg tggttgaaac 360 ctgcctaaga cgtcctaggt ctacgctgtg cgggccgaag taagcttagg aataacaggg 420 agtatgccat tttctgcttt cacccaacac gaccgtacac gaaagagcta gaggcacttt 480 ggggcaaagg gaaaagcttt gcttagcccg aatgttcatt tgagtccttg acgaatgcgt 540 cccgtctgtc ccgacggtga ggcgtatggc gcatgctcat ggcattaccc aatggtgtat 600 ctgtgagggg ggggctcctc acacttagtc tagtgctacc tgacagggcc gcggctggtc 660 gtttgtgtat ggtataacca gtagtaatcc cccatggatt gctttaactt cccctcctcc 720 cttaccaaga cattctctaa gatggcaatc tatgaggatg actcctcgga gtcaattaca 780 tgctgtaact ggattccacg gaatcgtcgt aacaaagtaa gaaaacaaaa acccaggagt 840 aaggcctcca gagtcgagat gtcaccaggg cctcttgtca ccttggccga tgatggctat 900 ctctatgtgc ataaacataa aggtgagact aaatttgtta ggagggatga aattctcaca 960 aaatatggca gatgtattgt tgagatggaa gaagtttttc aatgtggaca agtccaatca 1020 aatcaaacgg gaaacaaacc atcgtctggt tttatatatg gtacaggtaa ttcattaaca 1080 aatataaatt attatggtag tgattactca caggcatata acccttccca acaacagatg 1140 gacccgagtc aatttactaa gcctgttaca gagattgctg gttctctcaa aggtcctgca 1200 ctcaaaaaac ctgacacaga agaaagtggt tactcagata gattactaca actgacagct 1260 ggtaactcat gcatcaccac acaagaagcg gcgaaagccg ttgttgcata tggcatgtgg 1320 cctacataca atatagatgc tggggaggca ctggatttgg acacacgacc aggtccctca 1380 tgtgatagat tttacacatt tgattcatta aattggcaaa atacacagta tggagagtgg 1440 acatgcccct tgccaggcgc ccttatggac actggggtgt ttggacagaa cttgagattc 1500 cactatttat atagatctgg tttttgtgta catgtacagg tgaatgcttc ttccttccat 1560 cagggttgtt tattggttgc catggtgccc gaacatcaga caccaaaaca gcaaaacaat 1620 gacttccaat actatgagac taaggaattt tgtggaactg aatatccaac agaacagttg 1680 accctcttcc cacatcaatt cttaaacctg agaacaaata attctgttac aattgtttac 1740 ccttacacaa attgcacccc ttctggtttt ggattgagtc ataattttgt tactttagta 1800 attaggattg ttgttcctct gtcctattca acaggtgctt ccactcaaat ccctattact 1860 gtaagtgttg cccccatgtg ttcttcattt gctggtttga gatctgcagt taaatcacaa 1920 gggattccag tcaggcaaat accaggtagt agccaatttc tgacagtaca gagagatgcg 1980 ggtgtacccc tctatccaga gttccagaaa accgcacgat tcacacttcc tggtagagtc 2040 accaattaca tgcaggtggc tcgtgtcccg accctcatga aaatgccaaa cactatgagt 2100 gatggaacgt atttagctgt tgatgtcacc cagaatatta gaactcaagc aattggtaaa 2160 tgggatatgt cattgattgg agatttattc aaaccaacat atttaggtag attggctaag 2220 atgtatgcaa attatagggg ctctgtaata atagaattca tgttttgtgg gtcaaagatg 2280 gctacaggaa aatttcttgt tgcatacact cccccgggtg gttctagccc agcaacaagg 2340 gaggaagcaa tgcttgggac acatgtaatt tgggacattg gattacaatc tacatgtaaa 2400 tttgttatac catacatttc cacatctgtg tataggagtt caatgttgac aaacacgacc 2460 ttgtcatatg atggctggat cactatgtgg taccaaacag ccatagttgt accacctaac 2520 tgcccctcaa cctgccaaat tataggacta gttagtgctt ctgataattt tgtgttcagg 2580 ataccttctg ataataagta ttataccaac aatgtaaata tttctaagag tgctactgta 2640 cagggagaat cagactcaat tccatctgct ctaaatgctc acattgaaca agcggtcaca 2700 agtgcattaa acacccggcc acaacacagc catgacaatg ggcttgagat tatacaggga 2760 gatgcacccg ctctaactgc tgcagagtcg ggagaaacat cagatagtag tggccaaaca 2820 agcatggaat tgagggaatc taatgccatc ttttctatta gggaaacaga tatagagtat 2880 ctttattcta gatattttat gttttatgaa caagacattg ttataactac tgctgatctt 2940 aataaagaaa tgattaataa gtcttttact tttgatgctg ttgctgcttc tgaccctgct 3000 accacgaggt ggagagcttt tacctactgg agatttgatt tagatgttgt tgtagttata 3060 tatccccaga ttcataatgg aacctctccc caatctatga cttttcagat gatgttttca 3120 ccccccgggt gcgaggtccc agaagattat agttcaaagg tgtggctgtc tcccattaat 3180 ccaacttgca taaccaagat tcaagaccct cctactagtt tcagaatacc tttcttgtct 3240 gtttgtaatt attacacctc taggtatgat ggtgacggta catttgatcc ctctgataaa 3300 caatatggtg taaatccagg aaatttcatt ggtaatttaa caatcaagat gataaataat 3360 gtacaaccaa atttcacagg atcatatggg gttaggatct atgtaagacc tgtaaacatt 3420 gaggcatata tgcccaggcc attgctagca tatagggaag gaaaagttgt agaagactac 3480 tccagatata caactggtgg agctagaaac ttgggtcttg agtatgatgt tgacatcaaa 3540 tcccccattg gtgatatgtg gaatgtggat gactttgatt ttttaaatat gtctcctaca 3600 gatgttctgc tcgagagatg ttttgatgtt ttatctttct ctgctcaatt tgataaaggc 3660 cccttcactg cttggtggtg gaaagatgat ataattataa cctcatatca tgcttgcaat 3720 gattggtatg catatcttga aaggaaaaac ccagttttta ggtatagaat tagtatgtca 3780 actaagagat ggtggaagaa cccttacctt gttgaggccg ttggcgtgaa acaagtgtgg 3840 attgattcat ttcgcgacat cgctttcatc aaggtaattc catcttctag gataaaggct 3900 aggcctgggc tactgggtga aaatagagtc aggcataaga atgaaagaaa atttgaacat 3960 tgcttgtgtg taactaattc tgtagtattc cctgttagat atactgaata tagattcccc 4020 caatactgtg aattgctaaa ctttagagat caccaacaga gagacctatg gagttgtgtg 4080 ggtgatgctg agccaggttt ttgtggtagt atgctctttt ctgaaggcaa agtcataggg 4140 atgctcactg ccaaatctga atgtacatat gctgatggac aaaagaaaat gacaactttc 4200 ttcacccagt tagatactgc ttccttctat aggtgtgttg aaattaccaa gaaagattgc 4260 ttttatgcag ttcagcacga gcccgccgag caatgcgggc ttgaagaccc ctttaggtgt 4320 aatacaggat atccagatga tctcagtgag gaagaggaag aagaagatac tcctctaacc 4380 tttccagaag ctcactatca aggtttgtat gattggattc atgatatggg catttcattt 4440 ggtgatgggg ctggggaatc tttccagaga aatgtggatg aggcaattga aaaaataacc 4500 cctattgttt cacaatttaa aggtggagtg gagggctttc tcaaggacaa attatttaac 4560 tctttgtttt ccattcttgt taaggccata ggatctcttg tgatctacat aaatgctaaa 4620 gatgaatgta agctttctac ccttttagct cttggtagca tgttaggtgt ggatttcatg 4680 tcaaaagacc ccttcacata tttgtatgaa aaatttactg ggtgtgtaca aatgcaaggg 4740 cctagtgatt ggttaaaaga ttttaatatt gcttgtaatg catttaaagg tttagagtat 4800 atttaccaaa agttatccac attctttgat tggatcaggg gtcttgttaa gaaatctgag 4860 gatccagcta gggcggaatt tcatagaatg cttgaagatt ggcctgaagt tatggagaag 4920 atggatctga ttgaaagaaa caggaagaat taccatgatg ctgatgtgct tgaagtgtgt 4980 gaattcatag tgacattaaa gaagttagct gactcctatg gtgtagagag aaatatggcc 5040 accactcaaa tagtcagata ccatgcaaag gctcagaaac ttgcacaatc aattaggtct 5100 tctagatatg agcctgtagc attatgcatt catgggtccc caggcacagg aaaatcaata 5160 gccactgaaa tcatatcaag gtcacttgca caggctacag atacccaaat gccttactca 5220 ttacctcctg accccaaata ttttgatgga tattctcagc aaaatgtggt tgtaatggat 5280 gatttaggtc aaaacccaga tggtgaagac atgtccctat tctgtcagat ggtttccacc 5340 acagctttta tacctcctat ggcctctttg gaagagaagg gaatgtactt tacttctaat 5400 tttgtttgtg cctctacaaa ttgtacatct cttaaacccc ctacggtgat ggaaccagct 5460 gccctccatc gtcgattctt tcttgattgt gacataattg ttaataagga ttatgctata 5520 gataggaaat tagatatgtc taagtgtcag aaatgtctca actgtgataa gcctgaaaat 5580 tttaagcatt gtaatcctct tatttgtggt aaagccattt tattgcagga tagaaggact 5640 aatgttagat acacattgga taaggtcgtt acaataatgc ttgcagagtc taggaggagg 5700 agaaacatac tcaatgtggt tgatgcctta tttcagggtc ctagctatga gaaacctaag 5760 cttatcagaa agcaagtggt ggataaattg ctaccagagg aagttgttga ggttttgaag 5820 gaagtgccat cagaagagct catagctaag ttgaaggaaa aaggatatgt gttccccatt 5880 gaagttgagg taattaggga aagaagcaag gtgcagaagt acttaaactg gtttaccact 5940 gttatgtcta ctctcactac cattgtatca ttttctactg ttgtctatat gcttgttagt 6000 gtctttgcag ggaagcaagg tgcttacact ggtaacatca aaccagttat gcaaaaacct 6060 gtgctgagga aagctgttgt tcaaggacca gatctggaat ttgccaaatc tcttatgaaa 6120 tcttctctgt tccctgtttg tacatccact ggttcctata ctgctctagg actgtttgac 6180 caatggcttg ttcttcccgc tcactcaaac cccaaggatt ctattgtttt caaaggtgag 6240 agtgttaaaa tagtcgactc tatgcttctt gaatctagta gaggtaattt ggaattagtt 6300 gttgtgaaat tagataggac tgaaaaattt agagatatta ggaaatattt ggtagagaat 6360 ttccatacag aaaaagaatg ttggctggct ctgaattctg atcagtttcg ggatgtctat 6420 gtcccagttg gctctgtttc ccttttcggt tttcttaact tatccatgac tcccacatat 6480 aacaccctta aatataatta cccaacgaaa gttggacagt gtgggggaat agtggtgaaa 6540 gcaggaaaaa ttttggggat gcatattggt ggtgatggag tctcaggtta tgctgcaatg 6600 ttaaagaaat cctattttag tgtatgtcaa ggtgaaattg tacataagga atcaactaag 6660 gaaagaggtg tcaaatctat taatgttaaa accaagactg gactctaccc ttctgtcttt 6720 catgatgtgt ttgaagggac aaaagaacct gcagctcttc ggcctggtga tagccgtctt 6780 aaagttgatt tgaatgaagc tctcttttca aagtataagg gcaacaagca catctctatc 6840 cctcctgaaa cattcattgc tatagaccat tatgtagaac aaattagacc ccttctacca 6900 gagaatctga ctgaacaatt ggaattggaa gatgtagtct atggaattga aaatttagaa 6960 ggtttggatc tgaacacatc tgctgggtac ccctacaaca caatggggat aaggaagaga 7020 gacttaatcc cacacagagg tgaaccattg acacaattgc agaaagctct cgatttacat 7080 ggttatgatc ttcccttctc tacttatcta aaggatgaac ttagacccaa ggcaaaggta 7140 gaagcaggaa aaactaggtt aatagaatgt agttccctta atgacactat taggatgaag 7200 agaatctttg gtagattatt tcaaactttc cactctaacc ctggtacctg cactggatca 7260 gctgtgggtt gcaatcctga ttatcactgg tctcaattcg cctctgaaat aggtatggat 7320 aacatctgtg cctttgatta cactaattgg gatgcttcct tatctccttt ttggtttgat 7380 gctctgaagg tgtttttagt taaattaggt tatggtgaag gtgctataga tgctatagat 7440 catatctgtt attcatccca tatttttaaa gatcaatatt atgttgttca tggagggatg 7500 ccatcaggat gttcagggac ctccattttt aattctatca ttaataattt agttgttagg 7560 actttagttc ttaagtgcta taaaggaatc aacttagatt tactaagaat ccttgcttat 7620 ggagatgact tacttgtctc atacccattt ccattggacc ctgcggtgct tgctgatgcg 7680 ggcaaggagt taggcctcac aatgacccca gctgataaat ctgattcttt tagtggttgt 7740 agtaagttaa ctgaagttac tttcttgaag agatcttttg tctttgatga acaattccct 7800 tttctttgcc acccagtgtt ccctatgtct gaaattcatg agtccattag atggactagg 7860 agtgctgcaa caacacagga acatgtgaca tcgttgtgct tattggcttg gcataacgga 7920 aaggaagttt atgaagaatt ttgtgaaaag attcgcagca ctccagttgg gcgagcttta 7980 tctttgccat cttttgaggt gcttagatac aactggcttg acttgttcta attggctata 8040 atatggtgtt taacttgaat ttggttgaat tggttcttgt taatttggct aattggatga 8100 tataggtatt gcaccttata cctatt 8126 //