ID AY064391; SV 1; linear; genomic DNA; STD; VRL; 2663 BP. XX AC AY064391; XX DT 28-DEC-2001 (Rel. 70, Created) DT 08-MAR-2018 (Rel. 136, Last updated, Version 6) XX DE Melon chlorotic leaf curl virus isolate 98-631 segment DNA-A, complete DE sequence. XX KW . XX OS Melon chlorotic leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2663 RA Karkashian J.P., Maxwell D.P., Ramirez P.; RT "Squash yellow mottle virus: A new cucurbit-infecting geminivirus from RT Costa Rica"; RL Unpublished. XX RN [2] RP 1-2663 RA Karkashian J.P., Maxwell D.P., Ramirez P.; RT ; RL Submitted (29-NOV-2001) to the INSDC. RL Escuela de Biologia / CIBCM, Universidad de Costa Rica, Campus Rodrigo RL Facio, San Jose, SJ, Costa Rica XX DR MD5; c411d7726974354d4adb4028b7df183e. DR EuropePMC; PMC2258725; 18057231. DR EuropePMC; PMC3550763; 23637479. DR EuropePMC; PMC4174809; 25288955. XX FH Key Location/Qualifiers FH FT source 1..2663 FT /organism="Melon chlorotic leaf curl virus" FT /segment="DNA-A" FT /host="Cucurbita sp." FT /isolate="98-631" FT /mol_type="genomic DNA" FT /country="Costa Rica:Guanacaste Province" FT /note="collected January 5, 1998" FT /db_xref="taxon:165826" FT gene 205..960 FT /gene="cp" FT CDS 205..960 FT /codon_start=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:Q8UZM8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8UZM8" FT /protein_id="AAL47672.1" FT /translation="MVKRDAPWRLMAGTSKVSRSANYSPRGGMGPKFNKAAAWVNRPTY FT RKPRIYRTLRGPDIPKGCEGPCKVQSFEQRHDISHLGKVLCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVIFWLTRDRRPYGIPMDFGQVFNMFDNEPSTATI FT KNDLRDRFQVLHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYDNHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(957..1361) FT /gene="ren" FT CDS complement(957..1361) FT /codon_start=1 FT /gene="ren" FT /product="replication enhancer" FT /db_xref="GOA:Q8UZM7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8UZM7" FT /protein_id="AAL47675.1" FT /translation="MVMDLRTWEDITVYQAENSVFIWEVPNPLYFKIYNVEDPLYTHTR FT IYHIQIRFNHNLRRALNLHKAYLNFQVWTESIRASGTTYLSRFRHLVMLYLNRLGVIGL FT NNVIRAVSWATDRSYVTGVIEDHKIKFNIY" FT gene complement(1102..1497) FT /gene="trap" FT CDS complement(1102..1497) FT /codon_start=1 FT /gene="trap" FT /product="transactivation protein" FT /db_xref="GOA:Q8UZM6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8UZM6" FT /protein_id="AAL47674.1" FT /translation="MPNSSSSTAPSIKARHKIAKTRAIRRRRIDLNCGCSIFLHLNCQK FT NGNGFTHLGRHHCVSGGEFRFYLGSSKSPLFQDIQRGGSTLYAHQNIPHTNPVQPQPEE FT STKSSQSVPELPSLDGIDSSFWDDLFK" FT gene complement(1439..2518) FT /gene="rep" FT CDS complement(1439..2518) FT /codon_start=1 FT /gene="rep" FT /product="replication-associated protein" FT /db_xref="GOA:Q8UZM5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8UZM5" FT /protein_id="AAL47673.1" FT /translation="MPRNPKSFRLTTRNIFLTYPKCDVPKDEVLQMLQGLSWSVVRPTY FT IRVAREEHSDGFPHLHCLVQLSGKSNIKDAGFFDLTHPRRSARFHPNIQAAKDTNAVKN FT YITKEGDYCESGQYKVSGSSKSNKDDVYHNAVNAASAGEALDIIKGGDPKTFIVSYHNI FT TANVERLFQKPPEPWVPPFELSSFTSVPEELKDWAGHYFNECSAARPDLIGKSNSVCNR FT PISVIVEGDSRTGKTMWARALGPHNYMSGHLDFNSRVFSNDVKYNVIDDVAPHYLKLTH FT WKELIGAQRDWQSNCKYGKSVQIKGGIPSIVLCNPGEGASYKDFLDKAENAALREWTLK FT NAKFIFLNCPLYQSTTQDR" XX SQ Sequence 2663 BP; 715 A; 587 C; 594 G; 767 T; 0 other; accggatggc cgcccttttt ttggtgtcct acactttatc ccaggcccag gcccaaagca 60 accacaacct ttgttttttt gggaccacta caattatatc gaccaatcat attgacccat 120 gacagtctag ataatgatga cttggtgact aagcgtggtc cctataaatt aaagctgtct 180 aagcccatac ctctttaatt cgaaatggtt aagagggatg ccccatggcg tttaatggcg 240 gggacctcca aggtttcccg ctctgctaac tattcgcctc gtggaggtat gggccctaaa 300 ttcaataagg ccgctgcatg ggtgaacagg cccacgtaca gaaagcccag gatctatcgc 360 acattgcgag gacccgacat ccccaaagga tgtgaagggc catgtaaggt acaatcattt 420 gagcagcggc atgatatctc tcatcttggt aaagtgttat gtatttccga cgtgacgcgg 480 ggtaatggta ttacccatcg cgttggtaag cgtttttgtg ttaagtctgt atatatttta 540 ggcaagatat ggatggacga gaatatcaag ttgaagaacc atacgaacag cgttatcttc 600 tggttaacac gtgaccgtag accatatgga atccctatgg atttcgggca agtattcaac 660 atgttcgaca acgagcctag tactgccact atcaagaacg atctacgcga tcgtttccaa 720 gtacttcacc ggttttatgc gaaagtcacc ggtggacaat acgctagcaa cgaacaagcc 780 ctggtccggc gcttttggaa ggtgaacaac catgttgtgt ataaccacca agaagcaggg 840 aagtatgata accataccga gaacgcgttg ttattgtata tggcatgtac tcatgcctct 900 aaccctgtgt atgcgacatt gaagattcgg atctattttt atgattcgat aaccaattaa 960 taaatattga actttatttt atgatcttca atgacaccag ttacatatga tcgatctgtc 1020 gcccacgaaa cagctcgtat gacgttattc agaccaataa ctcctaatct atttaaatac 1080 aacataacta aatgcctaaa tctacttaaa taagtcgtcc cagaagctcg aatcgattcc 1140 gtccagactt ggaagttcag gtacgctttg tgaagattta gtgctctcct caggttgtgg 1200 ttgaaccgga tttgtatgtg gtatattctg gtgtgcgtat agagtggatc ctccacgttg 1260 tatatcttga aatagagggg atttggaact tcccagataa aaacggaatt ctccgcctga 1320 tacacagtga tgtcttccca agtgcgtaaa tccattacca ttcttttgac aattgagatg 1380 aaggaatatg gaacagccgc aattcaagtc gatgcgtctt cgacggatag ctcttgtttt 1440 agcgatcttg tgtcgtgctt tgatagaggg ggcagttgag gaagatgaat ttggcatttt 1500 tgagtgtcca ctctctaagt gctgcatttt cagctttgtc gaggaaatct ttatagctgg 1560 ccccctctcc aggattgcac agcacgattg aagggatacc gcctttaatt tgaactgact 1620 ttccatattt acagttggac tgccagtccc tctgggcccc aatcaattct ttccagtgcg 1680 ttagctttaa ataatgcgga gcgacgtcat caatgacgtt atacttgacg tcatttgaga 1740 acaccctaga attgaaatcc agatgaccac tcatatagtt atgtgggcct aaagcacgag 1800 cccacattgt tttgccagtt ctagaatcac cttcgactat tacactaata ggtctattac 1860 acacgctatt tgattttcct attaaatctg gccgcgcagc ggaacactca ttaaaataat 1920 gaccagccca atcttttaac tcttctggaa ctgacgtgaa cgacgacagt tcaaatgggg 1980 gaacccatgg ttctggaggt ttttgaaaca ggcgctcgac gttagccgtt atgttatggt 2040 aactcacgat aaacgttttt ggatccccac cctttataat gtcgagagcc tctcccgcac 2100 ttgctgcatt gacggcgttg tgataaacgt cgtctttatt ggactttgaa ctcccagaca 2160 ccttgtactg cccggattca caataatcac cttctttggt gatgtaattc ttgacggcat 2220 tggtgtcttt ggcagcttga atgttcggat gaaatcgggc agaccttctg gggtgagtaa 2280 ggtcgaaaaa tccagcatcc ttgatgttgg acttgcctga aagttgaacg aggcagtgta 2340 agtgcgggaa tccatctgaa tgttcctctc gggcgacacg gatatacgtt ggtctgacga 2400 ccgaccatga aagaccttga agcatttgaa gaacttcatc tttgggaaca tcgcacttcg 2460 gatacgttaa aaaaatgttc ctggtagtta aacggaacga tttagggttt cgtggcattt 2520 tttgtaaata tgacccagga caccaggagg agctctctca aaaagtccta tatttgtggt 2580 gtcctggtgt cctatatata ctacaaggct ctagaaggct ccttaggaca ccaggggtaa 2640 attcggccat ccgcaataat att 2663 //