ID   AY050489; SV 1; linear; genomic RNA; STD; VRL; 1801 BP.
XX
AC   AY050489;
XX
DT   21-OCT-2001 (Rel. 69, Created)
DT   17-APR-2003 (Rel. 75, Last updated, Version 2)
XX
DE   Rice black streaked dwarf virus isolate zhjr segment 10, complete sequence.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1801
RX   DOI; 10.1023/A:1020170020581.
RX   PUBMED; 12416683.
RA   Bai F.W., Yan J., Qu Z.C., Zhang H.W., Xu J., Ye M.M., Shen D.L.;
RT   "Phylogenetic analysis reveals that a dwarfing disease on different cereal
RT   crops in China is due to rice black streaked dwarf virus (RBSDV)";
RL   Virus Genes 25(2):201-206(2002).
XX
RN   [2]
RP   1-1801
RA   Bai F., Qu Z., Xu J., Ye M., Shen D.;
RT   ;
RL   Submitted (11-AUG-2001) to the INSDC.
RL   The Institute of Genetics, Fudan University, 220 Handan Road, Shanghai
RL   200433, P.R.China
XX
DR   MD5; 79a53f8f61a4fcd2a3df8c1b493c0a68.
DR   EuropePMC; PMC4015479; 24131521.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1801
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /isolate="zhjr"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:10990"
FT   CDS             22..1698
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:Q913D9"
FT                   /protein_id="AAL13116.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKAPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTIYLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSTSSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSATNTSTTVKKVKIHFPVQYFDEFKVNGHEKSIVVQ
FT                   THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVIMKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSSSNTSSHEHTQKIVLNKVTR"
XX
SQ   Sequence 1801 BP; 584 A; 336 C; 319 G; 562 T; 0 other;
     aagttttttt cctcacccat aatggctgac ataagactcg atatagcgcc cgatcttatc        60
     cataatggtg taccccagag actttccgat acaataattt taaacaaccg accaacaatc       120
     actctgttat ctcatttcaa caatctattt catgaattaa acattgtcaa agcgccccac       180
     gttgcatctt cccaaactac cgttaatttg tacattcgca aacatttgtt gacccgactt       240
     catgatagac tacagaccgt agaaactagc actttaccca acatcacgca acttaaagat       300
     catattcgca gtttctttca aaatgaacac caacctattt ttcagaccct aacgaacaac       360
     gacctgagcg aagaatttgt aggtgtgact acttttggac taagcttatt tgctacctcc       420
     aaacttgatg ctgaacaaat agaacgtgtg caaattgaga ccttaactga aggaaacatt       480
     acgttgaagc ccttttccgc tgatggttta gaagtcattc tcgatgatag ttatattggt       540
     atagttggca aaattccagg tttagaagtt cataaattgt tagataaatg ctgtcgtgaa       600
     gttcctgctc aaatgggaat acttactgat gaagttaaac ttttgatgcg tactggtaaa       660
     ttaagaattg atggtggtta cgatttcaat tgtcctgcaa gcactacaga tgttacacac       720
     tatggtggtt atgaccaatt ttcgcgtcaa atgttcgaac gtttgaatct cttttataat       780
     attagtctta gcataattcc cgtttcagct ttaaaaacaa tttatttatt cgaaaaagaa       840
     ttaagtgttt tggatgcaga taaatcttta ctcgaacaga cttggagcgc agtagcgtca       900
     tttgttgaaa cttggcaagt taaatctaaa gttaaagctg atgatcccga tgaatacgaa       960
     ctgaccagtt tgtccacttt gcgtactaat tacgatggta cttctacttc tagtcctttt      1020
     acagataaga aattcattga ctggtatatt aagacttttt ctaagactga aaaaggatcg      1080
     tctttacgtc gaaatgaatt agaagagaaa agtgccacta atacttcaac cacagtaaag      1140
     aaggttaaaa ttcatttccc tgttcaatat tttgacgaat ttaaagttaa tggacatgaa      1200
     aaaagcattg tagttcaaac tcataaaggt gaaatgacac tagattatta ccgtaaaatt      1260
     ggcgaagtat taagtgcgat ttggaaacgc ggtaaatctt tggctgtacc ttgttttgat      1320
     tacattaaac ttggcgttga aaaagcattt catttggcac ccgtaattat gaagaagtat      1380
     aacttgacga tcgacgacat tatcaacttc attgataaag gaccttccta tttggctaag      1440
     ttagacaaaa ttgatgattg gtctctaatt tcaaagctta ttattaccag tgttttacct      1500
     aacattattc aagctgttta taaaaccgat ccaagtaata atgttatgaa ctcagtaatt      1560
     atcagtagag cgaacaactt gttgaaatct gatagggaca gactattaaa gaaggcactt      1620
     tccgccaacg tttcttcctc caatacatct agtcatgagc atacacagaa gatagtacta      1680
     aacaaagtga caagatgacc actggaagta catcattagt gcgactagtt cagtgctgtg      1740
     cgatcttcag ttcattatcg atgccgagtg acgacggcta gggggaaatt cagctattgt      1800
     c                                                                      1801
//