ID   AY049220; SV 1; linear; genomic DNA; STD; VRL; 1379 BP.
XX
AC   AY049220;
XX
DT   06-MAR-2002 (Rel. 71, Created)
DT   22-DEC-2015 (Rel. 127, Last updated, Version 4)
XX
DE   Tomato chlorotic mottle virus isolate PE-Pt4 replication-associated protein
DE   (AC1) gene, partial cds; putative AC4 protein (AC4) gene, complete cds; and
DE   capsid protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   Tomato chlorotic mottle virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1379
RX   DOI; 10.1007/s00705-002-0917-0.
RX   PUBMED; 12556993.
RA   Ribeiro S.G., Ambrozevicius L.P., Avila A.C., Bezerra I.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., de Mello R.N., Rocha H., Zerbini F.M.;
RT   "Distribution and genetic diversity of tomato-infecting begomoviruses in
RT   Brazil";
RL   Arch. Virol. 148(2):281-295(2003).
XX
RN   [2]
RP   1-1379
RA   Ribeiro S.G., Ambrozevicius L.P., de Avila A.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., Mello R.N., Rocha H., Zerbini F.M.;
RT   ;
RL   Submitted (31-JUL-2001) to the INSDC.
RL   Departamento de Fitopatologia, Universidade Federal de Vicosa, Av. P.H.
RL   Rolfs s/n, Vicosa, MG 36571-000, Brazil
XX
DR   MD5; a6bcff544688822f966b8f88ec7aee3b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1379
FT                   /organism="Tomato chlorotic mottle virus"
FT                   /isolate="PE-Pt4"
FT                   /mol_type="genomic DNA"
FT                   /note="acronym: TCMV"
FT                   /db_xref="taxon:172391"
FT   gene            complement(<1..695)
FT                   /gene="AC1"
FT   CDS             complement(<1..695)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication-associated protein"
FT                   /note="Rep"
FT                   /db_xref="GOA:Q8QPR4"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPR4"
FT                   /protein_id="AAL82869.1"
FT                   /translation="MPPPKRFRLSAKNYFLTYPQCSLPKEEALSQLLAIQTPVNKLFLR
FT                   VARELHEDGQPHLHILIQFEGKFVCTNSRLFDLTSPTRSTHFHPNIQAAKSSSDVKSYV
FT                   EKDGDFVDHGVFQVDGRSARGGQQSANDTYAKVLNAGSVMEALNILREEQPKDFVLQHH
FT                   NIRSNLERIFAKAPEPWVPPFPLSSFTNVPVEMQAWADDYFGRHAAARPERPVSIIIEG
FT                   DSRTGKTMWA"
FT   gene            complement(245..544)
FT                   /gene="AC4"
FT   CDS             complement(245..544)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="putative AC4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QHP9"
FT                   /protein_id="AAL82870.1"
FT                   /translation="MKMGNLICTSSFSSKESSSAQTADYSTSHLQPGQHISIRTYRQLR
FT                   ARQMSNHTWRKTETSLIMEFSRSMVDQLEEVSNLPTTRTPRSSMQDQSWKHSIY"
FT   gene            1015..>1379
FT                   /gene="AV1"
FT   CDS             1015..>1379
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="capsid protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q8QPR3"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPR3"
FT                   /protein_id="AAL82868.1"
FT                   /translation="MPKRDAPWRHMAGTSKISRGANYSPRAGVGPRSNKAAEWVNRPMY
FT                   RKPRIYRMYRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCVSDVTRGNGITHRVGKRF
FT                   CVKSVYILGKVWMDENI"
XX
SQ   Sequence 1379 BP; 365 A; 295 C; 339 G; 380 T; 0 other;
     gcccacatcg tctttcccgt tcttgaatca ccctcgatta ttatactgac aggtctctcc        60
     ggccgcgcag cggcatgtct tccgaaataa tcatctgccc aagcttgcat ctcgacaggc       120
     acgttagtga acgacgagag tggaaacgga ggaacccacg gttctggagc cttcgcaaaa       180
     atacgctcta aattagaacg aatattatga tgttgaagca cgaaatcctt tggctgttct       240
     tctcttaata tattgagtgc ttccatgact gatcctgcat tgaggacctt ggcgtacgtg       300
     tcgttggcag attgctgacc tcctctagct gatctaccat cgacctggaa aactccatga       360
     tcaacgaagt ctccgtcttt ctccacgtat gatttgacat ctgacgagct cttagctgcc       420
     tgtatgttcg gatggaaatg tgttgacctg gttggagatg tgaggtcgaa taatctgctg       480
     tttgtgcaga cgaactttcc ttcgaactga atgaggatgt gcagatgagg ttgcccatct       540
     tcatgtaatt ccctggcaac tcgcaagaac agtttattaa ctggtgtttg aatggctaat       600
     agttgagaaa gtgcttcttc ttttggtaag gagcactgag gatatgtgag aaaataattc       660
     ttcgcactta aacgaaaacg ttttggcggt ggcattctcg taaataaagg ggtgtcacca       720
     attggggtct cgctcaaact gtgctagtca attggtgact ggtgacaata tatagtagaa       780
     gcctctatag aactttcaat cacaatcgaa cacttggcgg ccatccgtta taatattacc       840
     ggatggccgc gaaaaaattt agacctgggc cgctttattt gggccgctca atgaaagtaa       900
     tgtgtggccc aaccatgtta cgtctgacga gctaagataa ttgaaacgac ttagcgccca       960
     agtttaacaa cggctataaa ttgaatgtgc atttgtcgat aactttaatt caaaatgcct      1020
     aagcgcgatg ccccatggcg ccacatggca ggtacgtcta agattagccg gggcgctaat      1080
     tattctcctc gtgcaggagt tgggccacga tccaacaagg ccgctgaatg ggtaaatagg      1140
     cctatgtaca ggaagcccag gatatatcgg atgtacagga cccccgatgt tccaagaggc      1200
     tgtgaaggcc catgtaaagt ccagtcgtat gagcagcgtc acgatatatc ccatgttggg      1260
     aaggtgatgt gcgtctcgga cgtgacaaga ggtaatggta ttacccaccg tgtaggaaaa      1320
     cgtttttgtg ttaagtctgt gtatatttta ggtaaggtat ggatggatga gaatatcaa       1379
//