ID   AY049218; SV 1; linear; genomic DNA; STD; VRL; 1152 BP.
XX
AC   AY049218;
XX
DT   06-MAR-2002 (Rel. 71, Created)
DT   22-DEC-2015 (Rel. 127, Last updated, Version 4)
XX
DE   Tomato crinkle virus isolate PE-Pq3 replication-associated protein (AC1)
DE   gene, partial cds; putative AC4 protein (AC4) gene, complete cds; and
DE   capsid protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   Tomato crinkle virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1152
RX   DOI; 10.1007/s00705-002-0917-0.
RX   PUBMED; 12556993.
RA   Ribeiro S.G., Ambrozevicius L.P., Avila A.C., Bezerra I.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., de Mello R.N., Rocha H., Zerbini F.M.;
RT   "Distribution and genetic diversity of tomato-infecting begomoviruses in
RT   Brazil";
RL   Arch. Virol. 148(2):281-295(2003).
XX
RN   [2]
RP   1-1152
RA   Ribeiro S.G., Ambrozevicius L.P., de Avila A.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., Mello R.N., Rocha H., Zerbini F.M.;
RT   ;
RL   Submitted (31-JUL-2001) to the INSDC.
RL   Departamento de Fitopatologia, Universidade Federal de Vicosa, Av. P.H.
RL   Rolfs s/n, Vicosa, MG 36571-000, Brazil
XX
DR   MD5; f60c5595be292cff26032a4cbe66e8da.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1152
FT                   /organism="Tomato crinkle virus"
FT                   /isolate="PE-Pq3"
FT                   /mol_type="genomic DNA"
FT                   /note="acronym: ToCV"
FT                   /db_xref="taxon:172395"
FT   gene            complement(<1..694)
FT                   /gene="AC1"
FT   CDS             complement(<1..694)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication-associated protein"
FT                   /note="Rep"
FT                   /db_xref="GOA:Q8QPS0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPS0"
FT                   /protein_id="AAL82863.1"
FT                   /translation="MPLPKRFRLNAKNYFLTYPKCSLSKEEALSQLLALTIPVNKLFVR
FT                   VARELHEDGQPHLHVLIQFEGKFQCTNERLFDLTSPTRSAHFHPNIQAAKSSSDVKTYV
FT                   EKDGDFVDHGVFQIDGRSARGGQQSANDTYAKVLNAGSVMEALNILREEQPKDFVVQHH
FT                   NIRSNLERIFAKAPEPWVPPFPLSSFTNVPVEMQAWADDYFGRGSAARPERPVSIIIEG
FT                   DSRTGKTMW"
FT   gene            complement(244..537)
FT                   /gene="AC4"
FT   CDS             complement(244..537)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="putative AC4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPR9"
FT                   /protein_id="AAL82864.1"
FT                   /translation="MGNLICTSSSNSKGNSNVQTRDCSTLHLQPGQHISIQTYRQLRAA
FT                   QMLKHTWKKTEISLIMECSKSMADQLEEVSSLPTTRTPRSSTQDQSWRPSIY"
FT   gene            989..>1152
FT                   /gene="AV1"
FT   CDS             989..>1152
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="capsid protein"
FT                   /note="CP"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPR8"
FT                   /protein_id="AAL82862.1"
FT                   /translation="MALSLIQMSKRGATWRSLEGISKARRSINFSPRGGNGPRSNKAAD
FT                   WVNRPMYRKP"
XX
SQ   Sequence 1152 BP; 289 A; 251 C; 271 G; 341 T; 0 other;
     cccacattgt ctttcccgtt ctggaatcac cctcgattat tatactgaca ggtctctccg        60
     gccgcgcagc ggaacctctt ccgaaatagt catctgccca agcttgcatc tcgacaggca       120
     cgttagtgaa cgacgagagt ggaaacggag gaacccacgg ttctggagcc ttagcaaata       180
     tcctctccaa atttgaacga atattatgat gttgaacgac gaaatctttg ggttgttcct       240
     ctcttaatat attgagggcc tccatgactg atcctgcgtt gaggaccttg gcgtacgtgt       300
     cgttggcaga ctgctgacct cctctagctg atctgccatc gatttggaac actccatgat       360
     caacgaaatc tccgtctttt tccacgtatg ttttaacatc tgagctgctc ttagctgcct       420
     gtatgtttgg atggaaatgt gctgacctgg ttggagatgt aaggtcgaac aatctctcgt       480
     ttgtacattg gaatttccct tcgaattgga tgaggacgtg cagatgaggt tgcccatctt       540
     cgtgtaattc tctggcaaca cgaacgaata atttattgac tggtattgtt aaggctaata       600
     gttgggaaag tgcttcttcc ttcgatagag agcacttagg ataagtgagg aaatagtttt       660
     tggcatttaa acgaaatcgt tttgggagtg gcatatttgt aaataagagc ttgtacaccg       720
     attgggagct ctcaaaactt gctgaatgaa tcggtgtatt ggtgtacaat ttatactaga       780
     acccccaata gaactcccat tgtggtccca cacacgtggc ggccatccgt cataatatta       840
     ccggatggcc gcgcgatttt ttgccccccc ccctttaatt tgaattaaag taaagttttg       900
     tttggaccaa tgatattgcg tctgacgagg ttatttaatt tgaacaactt ggtgaccaag       960
     ttttaacggg tataaataga acgtacgact ggcattatct ttaattcaaa tgtctaagcg      1020
     aggggccaca tggcgctcac tggaggggat ctcaaaggcc cgtcgttcta tcaatttttc      1080
     gcctcgtgga ggtaatgggc ctaggtccaa taaggccgct gattgggtta acaggcctat      1140
     gtacagaaag cc                                                          1152
//