ID   AY049213; SV 1; linear; genomic DNA; STD; VRL; 1918 BP.
XX
AC   AY049213;
XX
DT   06-MAR-2002 (Rel. 71, Created)
DT   22-DEC-2015 (Rel. 127, Last updated, Version 4)
XX
DE   Tomato chlorotic mottle virus isolate BA-Ju2 replication-associated protein
DE   (AC1) gene, partial cds; and putative AC4 protein (AC4) and capsid protein
DE   (AV1) genes, complete cds.
XX
KW   .
XX
OS   Tomato chlorotic mottle virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1918
RX   DOI; 10.1007/s00705-002-0917-0.
RX   PUBMED; 12556993.
RA   Ribeiro S.G., Ambrozevicius L.P., Avila A.C., Bezerra I.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., de Mello R.N., Rocha H., Zerbini F.M.;
RT   "Distribution and genetic diversity of tomato-infecting begomoviruses in
RT   Brazil";
RL   Arch. Virol. 148(2):281-295(2003).
XX
RN   [2]
RP   1-1918
RA   Ribeiro S.G., Ambrozevicius L.P., de Avila A.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., Mello R.N., Rocha H., Zerbini F.M.;
RT   ;
RL   Submitted (31-JUL-2001) to the INSDC.
RL   Departamento de Fitopatologia, Universidade Federal de Vicosa, Av. P.H.
RL   Rolfs s/n, Vicosa, MG 36571-000, Brazil
XX
DR   MD5; 7762c19189c7088d30740d3564ff30e3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1918
FT                   /organism="Tomato chlorotic mottle virus"
FT                   /isolate="BA-Ju2"
FT                   /mol_type="genomic DNA"
FT                   /note="acronym: TCMV"
FT                   /db_xref="taxon:172391"
FT   gene            complement(<1..671)
FT                   /gene="AC1"
FT   CDS             complement(<1..671)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication-associated protein"
FT                   /note="Rep"
FT                   /db_xref="GOA:Q8QPT2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPT2"
FT                   /protein_id="AAL82848.1"
FT                   /translation="MPLPKRFRLNAKNYFLTYPKCSLSKEEALSQLLALTIPVNKLFVR
FT                   VARELHEDGQPHLHVLIQFEGKYQCTNERLFDLVSPTRSAHFHPNIQAAKSSSDVKAYV
FT                   EKDGDFVDHGVFQIDGRSARGGQQSANDTYAKVLNAGSVMEALNILKEEQPKDYVLQHH
FT                   NIRSNLERIFAKAPEPWVPPFPLSSFTNVPVEMQSWADDYFGRDAAARPERPISIIIEG
FT                   DS"
FT   gene            complement(221..514)
FT                   /gene="AC4"
FT   CDS             complement(221..514)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="putative AC4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPT1"
FT                   /protein_id="AAL82849.1"
FT                   /translation="MGNLICTSSYSSKENTSARTNDCSTLYPQQGQHISIRTFRQLRAL
FT                   QMSRHTWRKTETSLIMEFSRSMEDQLEEVSNLPTTRMPRSLTQDQSWRPSIY"
FT   gene            1002..1757
FT                   /gene="AV1"
FT   CDS             1002..1757
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="capsid protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q8QPT0"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPT0"
FT                   /protein_id="AAL82847.1"
FT                   /translation="MPKRDAPWRHMAGTSKISRSANYSPRAGVGPRPTKASEWVNRPMY
FT                   RKPRIYRMYRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCVSDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWRVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 1918 BP; 537 A; 391 C; 442 G; 548 T; 0 other;
     gaatcaccct cgattattat actgataggc ctctccggcc gcgcagcggc atcccttccg        60
     aaatagtcat ctgcccaaga ttgcatctcg acaggcacgt tagtgaacga cgagagggga       120
     aacggaggaa cccacggttc tggagccttt gcaaatatac gctctaaatt tgaacgaata       180
     ttatgatgct gaagaacgta atcttttggt tgttcctcct ttaatatatt gagggcctcc       240
     atgactgatc ctgcgttaag gaccttggca tacgtgtcgt tggcagattg ctgacctcct       300
     ctagctgatc ttccatcgat ctggaaaact ccatgatcaa cgaagtctcc gtctttctcc       360
     acgtatgcct tgacatctga agagctctta gctgcctgaa tgttcggatg gaaatgtgct       420
     gaccttgttg gggatacaag gtcgaacaat cgttcgttcg tgcactggta ttttccttcg       480
     aactgtatga ggacgtgcag atgaggttgc ccatcttcgt gtaattctct ggcaacgcga       540
     acgaatagtt tattcactgg tattgttaag gctaatagtt gggaaagtgc ttcttctttc       600
     gaaagagaac acttaggata agtgaggaaa tagtttttgg catttaaacg aaatcgtttc       660
     gggagtggca tatttgtaaa taagagcttg tacaccgatt gggagctctc acaaagtccg       720
     aatgaatcgg tgtattggtg tacaatatat actagaaccc tcaatagaac tttcaatctc       780
     gatcgaacac gtggcggcca tccgttataa tattaccgga tggccgcgaa aaaatttgga       840
     cctgggccgc ttttattggg cccgctctct ttattgattg aaagtaatgt gtggcccaac       900
     catgttaagt ctgacgagct tagatatttg taactactta gcgcccaagt tgtataacgg       960
     ctataaattg aacgtggttg tgatgataac tttaattcaa aatgcctaag cgcgatgccc      1020
     catggcgcca catggcaggg acgtctaaga ttagccgttc cgctaattat tctcctcgtg      1080
     caggagttgg gccacgaccc accaaggcct ctgaatgggt taacaggcct atgtacagga      1140
     agcccaggat atatcggatg tataggaccc ccgatgttcc aagaggctgt gaaggcccat      1200
     gtaaagtcca gtcgtatgag cagcgtcacg atatatccca tgttggtaag gtgatgtgtg      1260
     tgtcggacgt gacaagaggt aatggcatta cccaccgtgt aggaaagcgt ttttgtgtta      1320
     agtctgttta tattttaggt aagatatgga tggacgagaa tatcaagttg aagaaccaca      1380
     ccaacagtgt tatgttttgg ctggtcagag accgtagacc ctatgggact cctatggact      1440
     ttggccaagt ttttaacatg tttgacaatg agcccagtac tgccacggtc aagaatgatc      1500
     ttcgtgatcg ttatcaagtt atgcataaat tctatgctaa ggtgacaggc ggacaatacg      1560
     caagcaacga acaagcgctg gtcaagcgtt tttggagggt aaacaatcac gtggtgtaca      1620
     atcatcaaga agccgggaaa tacgagaacc atacggagaa cgcactatta ttgtatatgg      1680
     catgtactca tgcctcgaac cctgtgtatg cgacattaaa aattcggatc tatttttatg      1740
     attcgataac aaattaataa attttgaatt ttattgaatg attttctagt acatcatgga      1800
     catatgattt gtctgttgcg aaacgaacag ctcttattac attattaaat gaaataacgc      1860
     ctaattgatc tagatacaac tgaacaagaa atttaaatct acttaaatat ctcatccc        1918
//