ID   AY049206; SV 2; linear; genomic DNA; STD; VRL; 1336 BP.
XX
AC   AY049206;
XX
DT   06-MAR-2002 (Rel. 71, Created)
DT   22-DEC-2015 (Rel. 127, Last updated, Version 4)
XX
DE   Tomato chlorotic mottle virus isolate MG-Ig1 replication-associated protein
DE   (AC1) and putative AC4 protein (AC4) genes, complete cds; and capsid
DE   protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   Tomato chlorotic mottle virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1336
RX   DOI; 10.1007/s00705-002-0917-0.
RX   PUBMED; 12556993.
RA   Ribeiro S.G., Ambrozevicius L.P., Avila A.C., Bezerra I.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., de Mello R.N., Rocha H., Zerbini F.M.;
RT   "Distribution and genetic diversity of tomato-infecting begomoviruses in
RT   Brazil";
RL   Arch. Virol. 148(2):281-295(2003).
XX
RN   [2]
RP   1-1336
RA   Ribeiro S.G., Ambrozevicius L.P., de Avila A.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., Mello R.N., Rocha H., Zerbini F.M.;
RT   ;
RL   Submitted (31-JUL-2001) to the INSDC.
RL   Departamento de Fitopatologia, Universidade Federal de Vicosa, Av. P.H.
RL   Rolfs s/n, Vicosa, MG 36571-000, Brazil
XX
RN   [3]
RC   Sequence update by database staff to remove vector contamination
RP   1-1336
RA   Ribeiro S.G., Ambrozevicius L.P., de Avila A.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., Mello R.N., Rocha H., Zerbini F.M.;
RT   ;
RL   Submitted (21-DEC-2015) to the INSDC.
RL   Departamento de Fitopatologia, Universidade Federal de Vicosa, Av. P.H.
RL   Rolfs s/n, Vicosa, MG 36571-000, Brazil
XX
DR   MD5; 25281beab0af257cc9be48c2af61aab4.
XX
CC   On Dec 21, 2015 this sequence version replaced gi:19033281.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1336
FT                   /organism="Tomato chlorotic mottle virus"
FT                   /isolate="MG-Ig1"
FT                   /mol_type="genomic DNA"
FT                   /note="acronym: TCMV"
FT                   /db_xref="taxon:172391"
FT   gene            complement(<1..847)
FT                   /gene="AC1"
FT   CDS             complement(<1..847)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication-associated protein"
FT                   /note="Rep"
FT                   /db_xref="GOA:Q8QPV0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPV0"
FT                   /protein_id="AAL82827.2"
FT                   /translation="MPPPKHFRVNSKNYFLTYPHCSLSKEEALSQLLAIQIPVNKLFIR
FT                   VARELHEDGQPHLHVLIQFEGKFVCTNNRLFDLVSPTRSAHFHPNIQGAKSSSDVKAYV
FT                   EKDGDFSDHGVFQIDGRSARGGQQSANDTYAKVLNAGSVMEALNILREEQPKDFVLQHH
FT                   NIRSNLERIFAKAPEPWVPPFPLSSFTNVPVEMQDWVDDYFGRDAAARPERPISIIIEG
FT                   DSRSGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDVAPHYLKLKHRKDDVGLQ
FT                   M"
FT   gene            complement(397..690)
FT                   /gene="AC4"
FT   CDS             complement(397..690)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="putative AC4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPU9"
FT                   /protein_id="AAL82828.1"
FT                   /translation="MGNLICTSSYSSKGNSSAQTTDYSTLYPQQGQHISIRTFRELRAR
FT                   QMSRHTWRKTETSVIMEFSRSMADQLEEVSNLPTTRTPRFSTQDLSWKHSIY"
FT   gene            1186..>1336
FT                   /gene="AV1"
FT   CDS             1186..>1336
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="capsid protein"
FT                   /note="CP"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPU8"
FT                   /protein_id="AAL82826.2"
FT                   /translation="MPKRDAPWRHMSSTVKISRGFNSSPRAGVGPRSNKASDWVNRPMY
FT                   RKPCS"
XX
SQ   Sequence 1336 BP; 344 A; 298 C; 303 G; 391 T; 0 other;
     gcatctgcag gcccacatcg tctttcctgt gctttaactt tagatagtgc ggtgcgacat        60
     catcaatgac gttatactgc acatcgtttg agtagacctt tgaattgaaa tcgaggtgac       120
     cactcaagta attatgggac cctaatgcac gtgcccacat tgttttgcca cttcgagaat       180
     caccctcgat tattatactg ataggtctct ccggccgcgc agcggcatct ctcccgaaat       240
     agtcatctac ccaatcttgc atctcgacag gcacgttagt gaacgacgag aggggaaacg       300
     gaggaaccca aggttctgga gcctttgcga aaatacgctc taaatttgac ctaatgttat       360
     gatgttgaag cacgaaatct ttgggttgtt cctcccttaa tatattgagt gcttccatga       420
     cagatcctgc gttgagaacc ttggcgtacg tgtcgttggc agattgctga cctcctctag       480
     ctgatctgcc atcgatctgg aaaactccat gatcactgaa gtctccgtct ttctccacgt       540
     atgccttgac atctgacgag ctcttagctc cctgaatgtt cggatggaaa tgtgctgacc       600
     ttgttgggga tacaaggtcg aataatctgt tgtttgtgca gacgaatttc ccttcgaact       660
     gtatgaggac gtgcaaatga ggttgcccat cttcatgtaa ttctctggca acacgaatga       720
     acaacttatt aacaggtatt tgtatggcta ataattggga aagtgcttct tctttggaaa       780
     gagaacagtg tggatatgtc agaaaataat ttttggaatt tactcggaaa tgtttaggcg       840
     gtggcatatt tgaaataata gttgggcacc gattggggac tctctaaact tgctctagca       900
     attggggact ggggtcctat atatactaga accctctata ggactttcaa tctcgttcac       960
     acacgtggcg gccatccgat ataatattac cggatggccg cgcgattttt ttaaggccca      1020
     ttcagtttgg gccgctcttt tgggccttca cctttaattt tattgatagt aaatttggcc      1080
     caatcatgat gcatttgaca agctaagata tttacaacta cttaacgccc aagttgcata      1140
     acggctataa attaaacgtg gtagtgtcgt taactttaat tcaaaatgcc taagcgcgat      1200
     gccccatggc gccacatgtc aagtacagtt aagattagcc ggggctttaa tagttctcct      1260
     cgagcaggag ttgggccccg gtctaataag gcctctgact gggtaaacag gcccatgtac      1320
     agaaagccct gcagta                                                      1336
//