ID AY044137; SV 1; linear; genomic DNA; STD; VRL; 2779 BP. XX AC AY044137; XX DT 06-AUG-2002 (Rel. 72, Created) DT 31-AUG-2025 (Rel. 144, Last updated, Version 10) XX DE Tomato leaf curl Sudan virus - [Gezira] precoat protein (V2), coat protein DE (V1), replication enhancer (C3), transactivation protein (C2), DE replication-associated protein (C1), and C4 genes, complete cds. XX KW . XX OS Tomato leaf curl Sudan virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus solanumsudanense. XX RN [1] RP 1-2779 RX DOI; 10.1007/s00705-004-0484-7. RX PUBMED; 15703848. RA Idris A.M., Brown J.K.; RT "Evidence for interspecific-recombination for three monopartite begomoviral RT genomes associated with the tomato leaf curl disease from central Sudan"; RL Arch. Virol. 150(5):1003-1012(2005). XX RN [2] RP 1-2779 RA Idris A.M., Brown J.K.; RT ; RL Submitted (06-JUL-2001) to the INSDC. RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA XX DR MD5; 5cef9ca20da4d2205b04d7a4562afd84. XX FH Key Location/Qualifiers FH FT source 1..2779 FT /organism="Tomato leaf curl Sudan virus" FT /isolate="ToLCSDV-Gez" FT /mol_type="genomic DNA" FT /db_xref="taxon:270146" FT gene 135..485 FT /gene="V2" FT CDS 135..485 FT /codon_start=1 FT /gene="V2" FT /product="precoat protein" FT /note="movement protein" FT /protein_id="AAL05286.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYSHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT SKAQNIQNVSKS" FT gene 295..1068 FT /gene="V1" FT CDS 295..1068 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="encapsidation of viral genome" FT /protein_id="AAL05285.1" FT /translation="MSKRPGDIVISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSFDKRHDLKHTGEVLCVSDVTRGNGLTH FT RVGKRFCIKSIYIVGKVWMDENIKVKNHTNTCMFWLVRDRRPVTTPYGFGELFNMYDNE FT PSTATIKNDLRDRCQVLKRFTASLSGGQYASKEQCVIRRFYKIYNHIVYNHQEQGKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSISN" FT gene complement(1065..1469) FT /gene="C3" FT CDS complement(1065..1469) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer" FT /protein_id="AAL05290.1" FT /translation="MDSRTGELITAHQAENGVFIWEINNPLYFKITEHNERPFLMNHDI FT ISMQIRFSHNIRKVLGIHKCFLNFRIWTTLRPQTGRFLRVFRYQVLRYLNNIGVISINN FT VIRAVDHVLYNVLENTINVTEIHDIKYKFY" FT gene complement(1210..1617) FT /gene="C2" FT CDS complement(1210..1617) FT /codon_start=1 FT /gene="C2" FT /product="transactivation protein" FT /protein_id="AAL05289.1" FT /translation="MQPSSPSTSHCSPVPIKDQHKIAKKQPIRRKRVDLDCGCSYYLHI FT NCINYGFTHRGTHHCSSSREWRFYLGDKQSPIFQDNRTQREAISNEPRHHFHADKIQPQ FT YQEGTGDSQMFSQLPNLDDLTASDWSFLKSI" FT gene complement(1526..2605) FT /gene="C1" FT CDS complement(1526..2605) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /note="rep" FT /protein_id="AAL05287.1" FT /translation="MAPPKRFKINAKNYFLTYPQCSLSLSEALSQLQTLETPVNKLYIK FT ICRELHENGEPHLHALVQFEGKYQCTNNRFFDLASPSRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTIDWGEFQIDGRSARGGQQSANDAYAAALNAGSKSEALRIIKELAPKDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPEELEVWVSENVMSSAARPWRPNSIIIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNISLKNWALKNATFVTLYEPL FT FSSTNQGPTQNSQETTNQA" FT gene complement(2146..2448) FT /gene="C4" FT CDS complement(2146..2448) FT /codon_start=1 FT /gene="C4" FT /product="unknown" FT /protein_id="AAL05288.1" FT /translation="MGNLICMPLFSSKASTSARITDSSTWHPQVDQHISIQTFRELNPH FT LMSSPTSIKTETPSIGVSFRSMEDLQEEDNNQPMTLTQQHLTQAVSQRLLESLKN" XX SQ Sequence 2779 BP; 752 A; 533 C; 614 G; 880 T; 0 other; accggatggc cgcgcccctc tttttagtgg gtcccactca cgtcgctatc aaccaatcaa 60 aatgcatcct caaacgttag ataagtgttc atttgtcctt atatacttgg tccccaagtt 120 gtttgtcaag caatatgtgg gatccacttc taaatgaatt tcctgaatct gttcatggat 180 ttcgttgtat gttagctatt aaatatttgc aggccgttga ggaaacttac gagcccaata 240 cattgggcca cgatttaatt agggatctta tatctgttgt aagggcccgt gattatgtcg 300 aagcgacccg gcgatatagt catttccacg cccgtctcga aggttcgccg aaggctgaac 360 ttcgacagcc catacagcag ccgtgctgct gtccccattg tccaaggcac aaacaagcga 420 cgatcatgga cgtacaggcc catgtatcga aagcccagaa tatacagaat gtatcgaagt 480 cctgatgttc cccgtggatg tgaaggccca tgtaaggtcc aatcgtttga caagcgccat 540 gatttgaagc atacgggtga ggtattgtgt gtttcagatg taacacgtgg taatggcctt 600 actcatcgtg ttgggaaacg tttttgtatc aagtctattt acattgttgg caaagtgtgg 660 atggatgaga acattaaggt gaagaatcat actaacactt gtatgttctg gcttgttcgg 720 gatcgtcgtc cagttactac tccctatgga tttggagaat tgtttaacat gtatgataat 780 gagccatcta ctgccactat taagaatgat ctgcgggatc gttgtcaggt tcttaagagg 840 ttcactgcta gtttgagtgg tggtcaatat gcgtccaaag agcaatgtgt cattaggcga 900 ttttataaga tttataacca tattgtttat aatcatcaag agcaggggaa atatgagaat 960 catactgaga acgctctttt actgtatatg gcatgtactc atgcttctaa tccagtgtac 1020 gctactctta aaataagggt gtacttctac gattcaatat cgaattaata aaatttatat 1080 tttatatcgt gaatctcggt tacatttatt gtgttttcaa gtacattata caatacatga 1140 tcaactgctc taattacatt gttaatggaa attacaccaa tattatttaa atatctaaga 1200 acttgatatc taaatactct taagaaacga ccagtctgag gccgtaaggt cgtccagatt 1260 cggaagttga gaaaacattt gtgaatcccc agtaccttcc tgatattgtg gctgaatctt 1320 atctgcatgg aaatgatgtc gtggttcatt agaaatggcc tctcgttgtg ttctgttatc 1380 ttgaaatata ggggattgtt tatctcccag ataaaaacgc cattctctgc ttgatgagca 1440 gtgatgagtt cccctgtgcg tgaatccata gttgatgcag ttgatgtgga ggtagtatga 1500 gcagccacaa tctaggtcta cacgcttacg cctgattggt tgtttcttgg ctattttgtg 1560 ttggtccttg attggtactg gagaacagtg gctcgtagag ggtgacgaag gttgcattct 1620 tgagagccca atttttcaag gaaatatttt tttcttcgtc tagatattcc ttatatgagg 1680 aggtaggtcc tggattgcag aggaagatag tgggaattcc ccctttaatt tgaatgggct 1740 tcccatactt tgtgttgctt tgccagtccc tctgggcccc catgaattcc ttgaagtgct 1800 ttaaataatg cgggtctacg tcatcaatga cgttgtacca cgcatcatta ctgtacacct 1860 ttggacttag gtctagatgt ccacataaat agttatgtgg gcctagagac ctagcccaca 1920 ttgttttgcc tgttctgcta tcaccctcga tgataatact gttaggtctc catggccgcg 1980 cagcggaaga catgacgttc tcggacaccc atacttcaag ttcctctgga acttgattaa 2040 aagaagaaga taaaaaagga gagatataag gagccggagg ctcctgaaaa attctatcta 2100 aattagaatt taaattatga aactgtaaaa tataatcttt cggtgctaat tctttaatga 2160 ttctaagagc ctctgactta ctgcctgcgt taagtgctgc tgcgtaagcg tcattggctg 2220 attgttgtcc tcctcttgca gatcttccat cgatctgaaa ctcaccccaa tcgatggtgt 2280 ctccgtcttt atcgatgtag gacttgacat cagatgagga tttagctccc tgaatgtttg 2340 gatggaaatg tgttgatcta cttggggatg ccaggtcgaa gaatctgtta ttcgtgcact 2400 ggtacttgcc ttcgaactga acaagggcat gcagatgagg ttccccattc tcgtggagct 2460 ctctgcaaat tttaatgtat aatttattta caggagtttc gagggtttgt agttgggaaa 2520 gtgcttcgga taaagaaaga gaacactggg gataagtaag gaaataattt ttggcattta 2580 ttttaaaacg ctttggggga gccatttggt caatgtaccc cgattgactt ggatttcatt 2640 tatccctgca atcggtgtag tggggtacaa tatatacttg taccccaaat ggcaaattgg 2700 taatttagta aaagtatatt gcaattcaaa tttcaaaatt caaaaatcaa atcactaaag 2760 cggccatccg tataatatt 2779 //