ID   AY040344; SV 1; linear; mRNA; STD; VRL; 1953 BP.
XX
AC   AY040344;
XX
DT   31-JUL-2001 (Rel. 68, Created)
DT   27-FEB-2006 (Rel. 86, Last updated, Version 3)
XX
DE   Barley yellow dwarf virus - PAV coat protein mRNA, complete cds; and
DE   readthrough domain mRNA, partial cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-1953
RX   DOI; 10.1007/s00705-002-0859-6.
RX   PUBMED; 12376751.
RA   Papura D., Jacquot E., Dedryver C.A., Luche S., Riault G., Bossis M.,
RA   Rabilloud T.;
RT   "Two-dimensional electrophoresis of proteins discriminates aphid clones of
RT   Sitobion avenae differing in BYDV-PAV transmission";
RL   Arch. Virol. 147(10):1881-1898(2002).
XX
RN   [2]
RP   1-1953
RA   Kervarrec C., Jacquot E.;
RT   ;
RL   Submitted (14-JUN-2001) to the INSDC.
RL   UMR BiO3P, INRA, BP29, Domaine de la Motte, Le Rheu 35653, France
XX
DR   MD5; 4291f06a4e3b61949e697ff57ecdfd41.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1953
FT                   /organism="Barley yellow dwarf virus PAV"
FT                   /serotype="PAVb"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:2169986"
FT   CDS             1..603
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q91GX5"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q91GX5"
FT                   /protein_id="AAK77216.1"
FT                   /translation="MNSVGRRGPRRANQNGTRRRRRRTVRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   ASIRVEFKSHASATTAGAIFIELDTACKQSALGSYINSFTISRTASKVFRAEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
FT   CDS             <604..1953
FT                   /codon_start=1
FT                   /product="readthrough domain"
FT                   /note="expressed as a result of translational readthrough
FT                   of the coat protein amber codon"
FT                   /db_xref="GOA:Q91GX4"
FT                   /db_xref="InterPro:IPR002929"
FT                   /db_xref="UniProtKB/TrEMBL:Q91GX4"
FT                   /protein_id="AAK77217.1"
FT                   /translation="VDSSTPEPKPAPEPTPTPQPTPAPQPAPEPTPAPVPKRFFEYVGT
FT                   PTGTISTRENSDSISVSKLGGQSMQYIENEKCETKVIDSFWSTNNNVSAQAAFVYPVPE
FT                   GSYSVNISCEGFQSVDHIGGNEDGYWIGLIAYSNSSGDNWGVGNYKGCSFKNFLATNTW
FT                   RPGHKDLKLNDCQFTDGQIVERDAVMSFHVEATGTDACFYLMAPKTMKTDKYNYVVSYG
FT                   GYTNKRMEFGTISVTCDESDVEAKRITRHAETPIRSKHTLVSERYEEPLPTVIDQGLCD
FT                   VKTPEQEQTLVEEEDRQTVSTEPDIALQEYEAATAEIPDAEEDVLPSKEQLSSKPLDTS
FT                   GNIIPKPKEPEVLGTYQGQNIYPEDVPPLARQRLREAAKAPSTLLYERTPKKSNNFLTR
FT                   FVEANRSPTTPAAPTVSTASNMTREQLAEYTRIRKSLGLTAAKEYKAQFQ"
XX
SQ   Sequence 1953 BP; 597 A; 503 C; 452 G; 401 T; 0 other;
     atgaattcag taggccgtag aggacctaga cgcgcaaatc aaaatggcac aagaaggagg        60
     cgccgtagaa cagttcggcc agtggttgtg gtccaaccca atcgagcagg acccagacga       120
     cgaaatggtc gacgcaaggg aagaggaggg gcaaatcctg tatttagacc aacaggcggg       180
     actgaggtat tcgtattctc agtcgacaac cttaaagcca actcttccgg ggcaatcaaa       240
     ttcggcccca gtctatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccac       300
     cgttacaaga tcgcaagtat ccgtgttgag tttaagtcac acgcgtccgc aactacggcc       360
     ggcgctatct ttattgaact cgacaccgcg tgcaaacaat cagccctggg tagctacatt       420
     aattccttca caatcagcag gaccgcctca aaggtcttca gagccgaagc gattaacggg       480
     aaggaattcc aggaatcaac gatagaccag ttctggatgc tctacaaggc caatggaacc       540
     accactgaca cggcaggaca attcattatc acgatgagtg tcagtttaat gacggccaaa       600
     taggtagact cctcaacacc ggaaccgaaa cctgcaccag aacccacacc aaccccacag       660
     ccaacgccag ctccacagcc cgcacctgaa ccaactcctg caccagtccc caaaagattc       720
     tttgagtatg tcggcactcc aaccggtaca atctcaacta gagagaactc tgacagcatc       780
     tctgtcagca agctcggtgg acaatccatg cagtacatag agaatgagaa atgtgaaaca       840
     aaggtcattg actccttctg gagcactaac aacaacgtgt ctgcacaggc agccttcgtt       900
     tacccagtgc cagaaggatc atacagcgta aacatttcgt gcgaaggctt tcaatccgtt       960
     gaccatatag ggggcaatga ggatggctat tggattggtt taattgccta ctccaattcg      1020
     tcaggagaca attggggggt gggcaactac aaagggtgca gtttcaagaa tttcttggca      1080
     accaatactt ggagaccagg ccataaagat ctcaagttga atgattgcca gttcacagat      1140
     ggacaaatag ttgaaaggga cgccgtgatg tcttttcacg tcgaagctac aggtactgat      1200
     gcctgtttct acctaatggc tcccaaaaca atgaaaactg acaagtacaa ctatgttgtc      1260
     tcttatggag ggtacacaaa caaacgaatg gaatttggta ccatatctgt gacatgcgac      1320
     gaatccgatg ttgaggcaaa acgcataaca aggcacgctg aaactcccat ccgctccaag      1380
     cacacccttg tgtccgagcg gtatgaggag ccattaccca ccgtaatcga tcaaggcttg      1440
     tgtgatgtga aaactcccga gcaagaacaa acattggtgg aagaagaaga cagacaaact      1500
     gtttccactg aacctgatat agcactccag gaatacgaag ctgccacagc tgaaattcct      1560
     gatgctgaag aggatgtttt gccctccaag gaacagctgt cttccaagcc attggacacg      1620
     tctggcaata taatacctaa acccaaggaa cctgaagtac ttggaacata ccagggtcag      1680
     aatatttacc ctgaagacgt gccaccacta gcgcgacaga gattgcgcga agccgcgaaa      1740
     gcaccctcca cgttgctcta tgagagaacg ccaaagaaga gcaacaactt tttgactcgt      1800
     tttgtggagg cgaataggtc ccctaccact cccgctgccc caacagtgtc aactgcatca      1860
     aacatgacaa gggaacagct tgcggagtac actagaatta ggaaatccct tggactcaca      1920
     gcagctaagg aatacaaggc gcaatttcag tga                                   1953
//