ID   AY040343; SV 1; linear; mRNA; STD; VRL; 1953 BP.
XX
AC   AY040343;
XX
DT   31-JUL-2001 (Rel. 68, Created)
DT   27-FEB-2006 (Rel. 86, Last updated, Version 3)
XX
DE   Barley yellow dwarf virus - PAV coat protein mRNA, complete cds; and
DE   readthrough domain mRNA, partial cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-1953
RX   DOI; 10.1007/s00705-002-0859-6.
RX   PUBMED; 12376751.
RA   Papura D., Jacquot E., Dedryver C.A., Luche S., Riault G., Bossis M.,
RA   Rabilloud T.;
RT   "Two-dimensional electrophoresis of proteins discriminates aphid clones of
RT   Sitobion avenae differing in BYDV-PAV transmission";
RL   Arch. Virol. 147(10):1881-1898(2002).
XX
RN   [2]
RP   1-1953
RA   Kervarrec C., Jacquot E.;
RT   ;
RL   Submitted (14-JUN-2001) to the INSDC.
RL   UMR BiO3P, INRA, BP29, Domaine de la Motte, Le Rheu 35653, France
XX
DR   MD5; 077dd8faa7e610baf098e42b5e06cab1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1953
FT                   /organism="Barley yellow dwarf virus PAV"
FT                   /serotype="PAV13"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:2169986"
FT   CDS             1..603
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q91GX7"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q91GX7"
FT                   /protein_id="AAK77214.1"
FT                   /translation="MNSVGRRGPRRANQNGTRRRRRRTVRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSVRVEFKSHASATTAGAIFIELDTACKQSALGSYINSFTISRTASKVFRAEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
FT   CDS             <604..1953
FT                   /codon_start=1
FT                   /product="readthrough domain"
FT                   /note="expressed as a result of translational readthrough
FT                   of the coat protein amber codon"
FT                   /db_xref="GOA:Q91GX6"
FT                   /db_xref="InterPro:IPR002929"
FT                   /db_xref="UniProtKB/TrEMBL:Q91GX6"
FT                   /protein_id="AAK77215.1"
FT                   /translation="VDSSTPEPKPAPEPAPTPQPTPAPQPAPEPTPAPVPKRFFEYIGT
FT                   PTGTISTRENSDSISVSKLGGQSMQYIENEKCETKVIDSFWSTNNNVSAQAAFVYPVPE
FT                   GSYSVNISCEGFQSVDHIGGNEDGYWIGLIAYSNSSGDNWGVGNYKGCSFKNFLATNTW
FT                   RPGHKDLKLNDCQFTDGQIVERDAVMSFHVEATGTDACFYLMAPKTMKTDKYNYVVSYG
FT                   GYTNKRMEFGTISVTFDESDVEAKRITRHAETPIRSKHILVSERYEEPLPTITNQGLCD
FT                   VKTPEQEQTLVDEEDRQTVSTEPDVALQEYEAATAEIPDAEEDVLPSKEQLSSKPLDTS
FT                   GNIIPKSKEPEVLGTYQGQNIYPEDVPPLARQRLREAAKAPSTLLYERTPKKSNNFLTR
FT                   FVEANRSPTTPAAPTVSTTSNMTREQLAEYTRIRKSLGLTAAKEYKAQFQ"
XX
SQ   Sequence 1953 BP; 590 A; 509 C; 457 G; 397 T; 0 other;
     atgaattcag taggccgtag aggacctaga cgcgcaaatc aaaatggcac aagaaggagg        60
     cgccgtagaa cagttcggcc agtggttgtg gtccaaccca atcgagcagg acccagacga       120
     cgaaatggtc gacgcaaggg aagaggaggg gcaaatcctg tatttagacc aacaggcggg       180
     actgaggtat tcgtattctc agtcgacaac cttaaagcca actcttccgg ggcaatcaaa       240
     ttcggcccca gtctatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccac       300
     cgttacaaga tcacaagtgt ccgtgttgag tttaagtcac acgcgtccgc aactacggcc       360
     ggcgctatct ttattgaact cgacaccgcg tgcaaacaat cagccctggg tagctacatt       420
     aattccttca caatcagcag gaccgcctcc aaggtcttca gagccgaagc gattaacggg       480
     aaggaattcc aggaatcgac gatagaccag ttctggatgc tctacaaggc caatggaacc       540
     accactgaca cggcaggaca attcattatc acgatgagtg tcagtttaat gacggccaaa       600
     taggtagact cctcaacacc ggaaccgaaa cctgcaccag aacccgcacc aaccccacag       660
     ccgacgccag ctccacagcc cgcacctgaa ccaactcctg caccagtccc caaaagattc       720
     tttgagtata tcggcactcc aaccggtaca atctcaacta gagagaactc tgacagcatc       780
     tctgtcagca agctcggtgg acaatccatg cagtacatag agaatgagaa atgtgaaaca       840
     aaggtcattg actccttctg gagcactaac aacaacgtgt ctgcacaggc agccttcgtt       900
     tacccagtgc cagaaggatc atacagcgta aacatttcgt gcgaaggctt tcaatccgtt       960
     gaccacatag ggggcaacga ggatggctat tggattggtt taattgccta ctccaattcg      1020
     tcaggagaca attggggggt gggcaactac aaagggtgca gtttcaagaa cttcttggca      1080
     accaacactt ggagaccagg ccacaaagat ctcaagttga atgactgcca gttcacagat      1140
     ggacaaatag ttgaaaggga cgccgtgatg tcttttcacg tcgaagctac aggtactgat      1200
     gcctgtttct acctaatggc tcccaaaaca atgaaaactg acaagtacaa ctatgttgtc      1260
     tcttacggag ggtacacaaa caaacgaatg gaatttggta ccatatctgt gacattcgat      1320
     gaatccgatg ttgaggcaaa acgcataaca aggcacgctg aaactcccat ccgctccaag      1380
     cacatccttg tgtccgagcg gtatgaggag ccattgccca ccataaccaa tcaaggcttg      1440
     tgtgatgtga aaactcccga gcaagaacaa acattggtgg atgaagaaga cagacaaact      1500
     gtttccactg aacctgatgt agcactccag gaatacgaag ctgccacagc tgaaattcct      1560
     gatgctgaag aggatgtttt gccctccaag gaacagctgt cctctaagcc attggacacg      1620
     tctggcaata taatacctaa atccaaggaa cctgaagtac ttggaacata ccagggtcag      1680
     aacatttacc ctgaagacgt gccaccgcta gcgcggcaga gattgcgtga agccgcgaaa      1740
     gcaccctcca cgttgttata tgagcgaacg ccgaagaaga gcaacaactt cttgactcgt      1800
     tttgtggagg cgaataggtc ccctaccact cccgctgccc caacagtgtc aactacatca      1860
     aacatgacaa gggaacagct tgcggagtac actagaatta ggaaatccct tgggctcaca      1920
     gcagcgaagg aatacaaggc gcaatttcag tga                                   1953
//