ID AY036010; SV 1; circular; genomic DNA; STD; VRL; 2764 BP. XX AC AY036010; XX DT 09-JAN-2002 (Rel. 70, Created) DT 29-NOV-2005 (Rel. 85, Last updated, Version 6) XX DE Cotton leaf curl Gezira virus-[Okra/Egypt] isolate OkLCV/EG okra segment A, DE complete genome. XX KW . XX OS Cotton leaf curl Gezira virus-[Okra/Egypt] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2764 RA Idris A.M., Hussein M.H., Abdel-Salam A.M., Brown J.K.; RT "Phylogenetic relationships for okra leaf curl- and hollyhock leaf crumple RT begomoviruses and first report of associated satellite DNAs"; RL Arab J. Biotechnol. 5:67-82(2002). XX RN [2] RP 1-2764 RX DOI; 10.1603/0013-8746(2005)098[0827:GDOWBT]2.0.CO;2. RX AGRICOLA; IND43764757. RA Brown J.K., Idris A.M.; RT "Genetic differentiation of whitefly Bemisia tabaci mitochondrial RT cytochrome oxidase I, and phylogeographic concordance with the coat protein RT of the plant virus genus Begomovirus"; RL Ann. Entomol. Soc. Am. 98(6):827-837(2005). XX RN [3] RP 1-2764 RA Idris A.M., Hussein M.H., Abdel-Salam A.M., Brown J.K.; RT ; RL Submitted (17-MAY-2001) to the INSDC. RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA XX DR MD5; ee8554fbf3a602d113a1c0cfc4d03e7f. DR EuropePMC; PMC2839976; 20178575. XX FH Key Location/Qualifiers FH FT source 1..2764 FT /organism="Cotton leaf curl Gezira virus-[Okra/Egypt]" FT /segment="A" FT /host="okra" FT /isolate="OkLCV/EG okra" FT /mol_type="genomic DNA" FT /country="Egypt:Cairo" FT /db_xref="taxon:222461" FT gene 163..531 FT /gene="V2" FT CDS 163..531 FT /codon_start=1 FT /gene="V2" FT /product="precoat protein" FT /note="functions in movement" FT /db_xref="GOA:Q8V0H9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8V0H9" FT /protein_id="AAK64552.1" FT /translation="MWDPLLNDFPESVHGFRCMLAVKYLQAVRETYDPSTLGYDLLSDL FT IGVVRRTNYVEATSRYHHFHSRLESASPSELRQSRVILCTCPHCPRHKQTPGVVQQTQL FT QEAQNVQNVSEPRCPKGV" FT gene 323..1099 FT /gene="V1" FT CDS 323..1099 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="functions in encapsidation" FT /db_xref="GOA:Q8V0H8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8V0H8" FT /protein_id="AAK64553.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPGLSSARAPTVLVTNKRRAW FT SNRPNYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTKGSGLTH FT RTGKRFTIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATIKNDYRDRFQVMRKFSATVTGGPSGMKEQALVRRFFKINSQIVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1096..1497) FT /gene="C3" FT CDS complement(1096..1497) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancement protein ReN" FT /db_xref="GOA:Q8V0H7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8V0H7" FT /protein_id="AAK64557.1" FT /translation="MDSRTGELITAHQTENGVLIWTINNPLYFKTIKEIRLTHGNQTMV FT EMQIRFNYNLRKELGIHKCFMNFRVWTISRPPTGLFLNVFRKQIMKYLYRIGVISINNV FT IRAVNHVLYDVLQTTVASEFTHNIQIKLY" FT gene complement(1241..1645) FT /gene="C2" FT CDS complement(1241..1645) FT /codon_start=1 FT /gene="C2" FT /product="transcription activation protein TrAp" FT /db_xref="GOA:Q774U1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q774U1" FT /protein_id="AAK64556.1" FT /translation="MRPSSPSQIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAF FT TCRDNGFTHRGTHHCASDREWRTYLDNQQSPVFQNHKGDSSNARESNNGRDADKIQLQP FT QEGIGDSQMFHELQGLDDLTPSDWSFLKRI" FT gene complement(1545..2633) FT /gene="C1" FT CDS complement(1545..2633) FT /codon_start=1 FT /gene="C1" FT /product="replication associated protein Rep" FT /db_xref="GOA:Q8V0H6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8V0H6" FT /protein_id="AAK64554.1" FT /translation="MAPPHRFQIYAKNYFLTFPKCSQTKEEALEQIQQISTASNKKYIK FT ICRELHEDGQPHLHVLLQFEGKFKCQNQRLFDLVSPNRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKAEALRVIRELAPKDFVLQFH FT NLNSNLERIFQEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPSRPISIVIEGE FT SRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEDKNAHLKSWSLKNATFITLSNPL FT YSGTNQSPASGGQEESNQETQD" FT gene complement(2183..2476) FT /gene="C4" FT CDS complement(2183..2476) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q774U0" FT /protein_id="AAK64555.1" FT /translation="MANLIYMCFSSSKGSSSAKIRDSSTWSPQIGQHISIQTFRELNPA FT PTSSPTSTRMETHWNGENSRSTEDLQEEDNRPPMTLTPQRLTQEVRQRLLGL" XX SQ Sequence 2764 BP; 687 A; 615 C; 623 G; 839 T; 0 other; accggtgggc gcgaaaaaaa aaagtggtcc ccgccccacg tgaacatgtc gcgcgagtgc 60 tgaacatgtc gcgcgatgat gtccaatcag aacgcgcgct ctacgcatta taatttgaaa 120 tttgaaatat aaacttgctc cctaagtttg gccggcataa ctatgtggga tccgttattg 180 aacgacttcc ctgaatccgt tcacggtttc cgttgtatgc tcgccgtgaa atatctgcag 240 gctgttcgag agacgtacga tccttccact cttgggtacg atcttcttag cgatctcatc 300 ggagttgttc gccgtaccaa ctatgtcgaa gcgaccagca gatatcatca tttccactcc 360 cgcctcgaaa gtgcgtcgcc gtctgaactt cgacagtccc gggttatcct ctgcacgtgc 420 ccccactgtc ctcgtcacaa acaaacgccg ggcgtggtcc aacagaccca attacaggaa 480 gcccagaatg tacagaatgt atcggagccc agatgtccca aaggggtgtg aaggtccatg 540 taaggtccag tcatatgaac agcgtgatga tgtgaagcat actggtattg ttcgctgtgt 600 ttctgatgtg accaagggaa gtgggcttac tcatcgtact ggaaagcgtt tcacaatcaa 660 atccatttat attcttggta aggtatggat ggatgagaac attaagaagc agaatcacac 720 caacaatgtc atgtttttcc ttgttcgtga tagaagaccg tatgggaatt ccccgatgga 780 ttttggtcaa gtttttaaca tgtttgataa tgagcccagt actgctacta taaagaatga 840 ttatcgagat cgtttccagg tgatgcgtaa gtttagtgct actgtaactg gtggtccttc 900 tgggatgaag gaacaggctc ttgttcgtag gttttttaag attaacagtc agattgtgta 960 taaccatcag gaagctgcga agtatgagaa ccatactgag aatgctttgt tgttgtatat 1020 ggcatgtact catgcctcta atcctgtgta tgctacgtta aagatacgga tctacttcta 1080 cgattcggta tctaattaat acaattttat ttgaatattg tgggtgaatt cacttgccac 1140 tgttgtttgc aatacatcgt acaaaacatg attgactgcc ctaattacat tgttaattga 1200 aattacgcct attctataca aatatttcat aatctgcttc ctaaatacgt ttaagaaaag 1260 accagtcgga gggcgtgaga tcgtccagac cctgaagttc atgaaacatt tgtgaatccc 1320 caattccttc ctgaggttgt agttgaatct tatctgcatc tctaccattg tttgattccc 1380 gtgcgttaga cgaatctcct ttatggtttt gaaatacagg ggattgttga ttgtccagat 1440 aagtacgcca ttctctgtct gatgcgcagt gatgagttcc cctgtgcgtg aatccattgt 1500 ctctgcacgt gaaggctacg tataccgtgc aaccacaagg gatgtcaatc ctgcgtctcc 1560 tgattgctct cttcttggcc tcccgatgct ggactttgat tggtacctga gtacagcgga 1620 tttgagaggg tgatgaaggt cgcattcttt aatgaccagg atttaagatg cgcgttcttg 1680 tcctcgtcta aatactcttt ataggaggaa ttgggacctg gattgcagag gaagattgtt 1740 gggatgcccc ctttaatttg aactggcttc ccgtattttg tgttgctttg ccagtccttt 1800 tgtgccccca tgaactcctt aaagtgtttc agataatgcg ggtcaacatc atctatgacg 1860 ttataccatg cgtcattact gaacaccttt gggctcagat caagatgacc gcacagataa 1920 ttgtgaggcc caagacttct ggcccatacg gtctttcctg ttctgctttc cccttcaatc 1980 actatactaa tcggtctact tggccgcgca gcggcctcaa cgacgttctc cgccgcccat 2040 tcttcaagtt cttcgggaac ttggtcgaac gaagaagaca aaaaaggaga aacataagga 2100 gctggaggct cctgaaaaat cctctctaaa ttactattta aattatgaaa ttgtaaaaca 2160 aaatctttgg gagctaactc ccttataacc ctaagagcct ctgccttact tcctgcgtta 2220 agcgctgcgg cgtaagcgtc attggcggtc tgttgtcctc ctcttgcaga tcttccgtcg 2280 atctggaatt ctccccattc cagtgtgtct ccatccttgt cgatgtagga cttgacgtcg 2340 gagctggatt tagctccctg aatgtttgga tggaaatgtg ctgacctatt tggggagacc 2400 aggtcgaaga gtctctgatt ttggcacttg aacttccctt cgaactggag aagcacatgt 2460 agatgaggtt ggccatcctc gtgaagctct ctgcagatct tgatatattt cttgtttgaa 2520 gctgtgctta tttgctgtat ttgctctagg gcttcctctt tcgtttgaga acattttggg 2580 aaagttagga aataattctt ggcatatatt tggaatctgt ggggaggagc cattgacttg 2640 gtcaatcggt actcagatgc ttctctccaa tatatcggta ctcaatatat agtgagtacc 2700 aaatggcatt ttggtaaaaa tcccaataat tttgaacccc catagcgccc accgttctaa 2760 tatt 2764 //