ID   AY029750; SV 1; circular; genomic DNA; STD; VRL; 2588 BP.
XX
AC   AY029750;
XX
DT   09-MAY-2001 (Rel. 67, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Tomato severe rugose virus DNA-A, complete sequence.
XX
KW   .
XX
OS   Tomato severe rugose virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2588
RA   Rezende W.L., Goulart L.R., Parreira K.S., Figueiredo J.E.F.;
RT   "The full-length DNA-A nucleotide sequence of a novel tomato-infecting
RT   begomovirus, Tomato severe rugose virus, in Brazil";
RL   Unpublished.
XX
RN   [2]
RP   1-2588
RA   Rezende W.L., Goulart L.R., Parreira K.S., Figueiredo J.E.F.;
RT   ;
RL   Submitted (03-APR-2001) to the INSDC.
RL   Instituto de Genetica e Bioquimica, Universidade Federal de Uberlandia, Av.
RL   Amazonas s/n, Bloco 2E, Sala 24, Campus Umuarama, Uberlandia, Minas Gerais
RL   38.400-000, Brazil
XX
DR   MD5; 964945d0099084ef2459f62a171cd8a8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2588
FT                   /organism="Tomato severe rugose virus"
FT                   /segment="DNA-A"
FT                   /strain="Minas Gerais"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:158463"
FT   rep_origin      join(2583..2588,1..304)
FT                   /note="common region"
FT   CDS             305..1060
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q91R13"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q91R13"
FT                   /protein_id="AAK50360.1"
FT                   /translation="MPKRDAPWRLMAGTSKVSRSANYSPRAGYGPKYNKAAEWVNRPMY
FT                   RKPRIYRTLRGPDVPRGCEGPCKVQSYESRHDVSHVGKVICVSDVTRGNGITHRVGKRF
FT                   CVKSLYILGKVWMDESIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRFQVMHMFYAKVTGGQYASNEQALVKRFWKVNNNVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(1057..1455)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="enhancer protein"
FT                   /db_xref="GOA:Q91R12"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q91R12"
FT                   /protein_id="AAK50358.1"
FT                   /translation="MDSRTGGLITARQAENGVYIWEISNPLYFKINRVEDPMYTTSRVY
FT                   HVQIRFNHNLRRALHLHKSFINFQIWTTSLTASGTTYLNRFKYLVLLYLDRLGVISINN
FT                   VIRAVRFATDKSYVNAVLENHLIKFKFY"
FT   CDS             complement(1202..1591)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="TrAP"
FT                   /db_xref="GOA:Q91R11"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q91R11"
FT                   /protein_id="AAK50361.1"
FT                   /translation="MRNSSSLTPPSIKVQHRAAKKRGIRRRRIDIECGCSIYVHIGCRG
FT                   HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDKQSGGSNVHHEQSLPRPNTVQPQPEESI
FT                   ASPQELHQLPDMDDFTDSFWDDIFK"
FT   CDS             complement(1533..2588)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="rep protein"
FT                   /db_xref="GOA:Q91R10"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q91R10"
FT                   /protein_id="AAK50357.1"
FT                   /translation="MPSATKRFQIKAKNYFLTYPKCSLSKEEALSQLKKLNTPTNKKFI
FT                   KVCRELHENGEPHLHVLLQFEGNYCRQNQRFFDLVSPTRSTHFHPNIQRAKSSSDVKSY
FT                   VDKDGDTIEWGEFQIDGRSARGGCQTANDAAAEALNAPSKDVALQIIREKLPEKFLFQF
FT                   HNLNSNLDRIFARAPEPWAPTFPLSSFTNVPREMQDWADDYFGRGAARPERPISIIIEG
FT                   DSRTGKTMWARAFGAHNYLSGHLDFNPRVYSNHVEYNVIDDIAPHYLKLKHWKELLGAQ
FT                   KDWQSNCKYGKPVQIKGGIPCIELCNPGEGASYKVFPRHKENASLNNWTKHNAKFVFLN
FT                   TPLYQGTTQSC"
FT   CDS             complement(2171..2434)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="AC4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q91R09"
FT                   /protein_id="AAK50359.1"
FT                   /translation="MKMGSLISTCFFNSKAITAAKINDSSTWSPQQGQHISIRTFRELN
FT                   HRPTSSPMSTRTEILSNGANSKSTAEVLEAVARQLTMLPQKP"
XX
SQ   Sequence 2588 BP; 660 A; 525 C; 598 G; 805 T; 0 other;
     atttgtaaat atggccctta ctaccaattg gtagctgctc taaaactcat atgaattggt        60
     agtaatggta gctcttatat agtagaagtt cctttaagga gattgctaca cgtggcggcc       120
     atccgttata atattaccgg atggccgcgc gattttcacc cttttatttt caattaaagt       180
     aaagtgattg tctgtggccc aatcatattg ggcctgtcga gcttagatag ttgtatcaac       240
     ttaaggccca agttgttaaa cggctataaa ttgaacatac actttacttt tgctttaatt       300
     caaaatgcct aagcgtgatg ccccatggcg tttaatggcg ggaacttcaa aggtttcccg       360
     ctctgccaat tattctcctc gtgcaggata tgggccaaaa tataacaagg ccgctgagtg       420
     ggtgaacagg cccatgtaca ggaagcccag gatctaccgt actttgagag gcccagatgt       480
     tcctagaggc tgtgaagggc cttgtaaggt tcagtcttac gagtctcgtc atgatgtttc       540
     ccatgtcggg aaggtgattt gtgtgtctga cgttacacgt ggtaacggta ttactcaccg       600
     tgttggtaag cgtttctgcg tgaagtctct atatatttta gggaaggtat ggatggacga       660
     gagcatcaag ttgaagaatc acacaaatag tgtgatgttc tggttggtta gagatcggag       720
     accttatggg acacctatgg attttggcca ggtgttcaac atgtttgaca acgagcctag       780
     cactgcaact gttaagaacg atcttcggga tcgttttcaa gtcatgcaca tgttttatgc       840
     caaggttact ggtggccagt atgccagtaa tgagcaggca ttggtgaagc gcttttggaa       900
     ggtcaacaac aacgtggtct acaaccatca ggaggcaggg aaatacgaga atcatactga       960
     gaacgccttg ctattgtata tggcatgtac tcatgcctct aaccccgtgt atgctacatt      1020
     gaaaattcgg atctattttt atgattcgat tactaattaa taaaatttaa attttattaa      1080
     atgattttcg agtacagcat ttacatatga tttgtctgtt gcaaaacgaa cagctctgat      1140
     tacattatta atggaaataa cgcctaatcg atctaggtac aataagacta aatatttaaa      1200
     tctatttaaa tatgtcgtcc cagaagctgt cagtgaagtc gtccatatct ggaagttgat      1260
     gaagctcttg tggagatgca atgctctcct caggttgtgg ttgaaccgta tttggacgtg      1320
     gtagactctg ctcgtggtgt acattggatc ctccactctg tttatcttga aatagagggg      1380
     atttgatatc tcccaaatat agacgccatt ctctgcctga cgtgcagtga tgagtccccc      1440
     tgtgcgtgaa tccatgtcct ctgcagccga tgtgtacgta aatagagcat ccgcactcta      1500
     tatcaattcg tcgtctcctg attcctcgtt ttttagcagc tctgtgttgt accttgatag      1560
     aggggggtgt taaggaagac gaatttcgca ttgtgctttg tccaattatt tagacttgca      1620
     ttttccttgt gtcgaggaaa cactttatag ctggccccct cgccaggatt gcaaagctcg      1680
     atgcatggga taccaccttt aatttgaact ggctttccgt atttgcagtt tgattgccaa      1740
     tccttttggg ccccaagcaa ttctttccag tgctttaact ttagataatg cggtgcgatg      1800
     tcatcaatga cgttatattc aacatgattt gaataaaccc taggattaaa atctaggtgt      1860
     ccactcaaat aattatgggc cccgaatgca cgtgcccaca tcgtctttcc tgttcgagaa      1920
     tcaccttcaa tgatgatact aataggtcgt tcaggccgcg cagcacctct cccaaaatag      1980
     tcatctgccc aatcttgcat ctctctcggt acgttagtga aagaggagag gggaaacgta      2040
     ggggcccatg gctccggagc ccttgcaaat atcctatcta aattactatt tagattgtga      2100
     aactgaaata aaaacttttc cggtagcttc tcccggatta tctgcaaggc gacgtctttg      2160
     gaaggtgcgt tcaaggcttc tgcggcagca tcgttagctg tctggcaacc gcctctagca      2220
     cttctgccgt cgatttggaa ttcgccccat tcgatagtat ctccgtcctt gtcgacatag      2280
     gacttgacgt cggacgatga tttagctctc tgaatgttcg gatggaaatg tgttgacctt      2340
     gttggggaga ccaggtcgaa gaatcgttga ttttggcggc agtaattgcc ttcgaattga      2400
     agaagcacgt ggagatgagg ctccccattt tcatggagct ctctgcaaac tttgatgaac      2460
     ttcttatttg taggagtgtt aagttttttc aattgggaaa gtgcttcttc tttcgataat      2520
     gagcatttgg gatatgttag gaaataattc ttggctttta tttgaaagcg ctttgtagct      2580
     gatggcat                                                               2588
//