ID AY017339; SV 1; linear; genomic RNA; STD; VRL; 3820 BP. XX AC AY017339; XX DT 08-JUN-2001 (Rel. 68, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Arabis mosaic virus isolate NW segment RNA2 polyprotein P2 gene, complete DE cds. XX KW . XX OS Arabis mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3820 RX DOI; 10.1016/S0168-1702(01)00235-0. RX PUBMED; 11325468. RA Wetzel T., Meunier L., Jaeger U., Reustle G.M., Krczal G.; RT "Complete nucleotide sequences of the RNAs 2 of German isolates of RT grapevine fanleaf and Arabis mosaic nepoviruses"; RL Virus Res. 75(2):139-145(2001). XX RN [2] RP 1-3820 RA Wetzel T., Meunier L., Jaeger U., Reustle G., Krczal G.; RT ; RL Submitted (08-JAN-2001) to the INSDC. RL Staatliche Lehr und Forschungsanstalt, Centrum Gruene Gentechnik, RL Breitenweg 71, Neustadt an der Weinstrasse 67435, Germany XX DR MD5; e449ca99fef6a3b9e86d1bb1339afb6f. DR EuropePMC; PMC3550808; 23730004. XX FH Key Location/Qualifiers FH FT source 1..3820 FT /organism="Arabis mosaic virus" FT /segment="RNA2" FT /host="grapevine cultivar Pinot gris" FT /isolate="NW" FT /mol_type="genomic RNA" FT /note="Neustadt an der Weinstrasse" FT /db_xref="taxon:12271" FT CDS 296..3628 FT /codon_start=1 FT /product="polyprotein P2" FT /db_xref="GOA:Q91HK4" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/Swiss-Prot:Q91HK4" FT /protein_id="AAK07728.1" FT /translation="MAKFYYSDRRLACWAAGKNPHLGGSIESWLAAIKSDSSFRQTVKE FT DVQVNRLQPTAVRMFSWKVGSGPIDNPEKCNWHYVLTGEVPAQPTEPVKAREVVVPPVK FT VIPSPPPVPRPYFRPVGAFAPTRSGFIRATVERLSRKREESRAAALFAELPLEYPQGAP FT LVVPRGFAAMRWTYHATWRRWYDASDERALRVHPGGPALPPPPPPPPIQKPPSFEERLQ FT AALERQSCARAFALETSLGLNMAWLGTAAIPSTSVCCADGRTTGGQTIAQEADPINHRV FT TSNTAPGRAQWISERRSALRRREQANSLQSLAAQTDMTFEQARNAYLGAADMVEQGLPL FT LPPLRNAYAPRGLWRGPSTRANYTLDFRLNGIPTGQNTLEILYNPVADEEMDEYRDRGM FT SAVVIDALEIAINPFGMPGNPTDLTVVATYGHERNMERAFIGSSSTFLGNGLARAIFFP FT GLQYSQEEPRRESIIRLYVASTNATVDADSILAAISVGTLRQHIGSLHNRTVASSVHAA FT QVQGTTLRATMMGNAVVVSPEGSLVTGTPEANVQIGSGSSMRMVGPLAWENVEEPGQTF FT TIRNRSRSMRVDRNADVGVALPRMSTTTRGLAGRGSVQVPKDCQAGRYLKTLDLRDMVS FT GFSGIQYEKWITAGLVMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSITTTASPAYT FT LSVPHWLLHHKNGTTSCDIDYGELCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEF FT VVELYAEFEAAKTFLGRPNFVYSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQT FT LIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICSPCTYGIVLRVVSEWNGVTNNWNQLF FT KYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAASAFTSTLNFYAISGPIAPSGETAKM FT PVVVQIDEIALPDLSVPSFPNDYFLWVDFSAFTVDAEEYVIGSRFFDISSTTSTVHLGD FT NPFAHMIACHGLHHGILDLKLMWDLEGEFGKSSGGVTITKLCGDKATGMDGASRVCALQ FT NMGCETELYIGNFAGANPNSALSLYSRWLAIKLDKARSMKMLRILCKPRGNFEFYGRTC FT FRV" XX SQ Sequence 3820 BP; 917 A; 814 C; 937 G; 1152 T; 0 other; atgaaaattc tcgtggggtt ttcatataaa cgcagcccac gacttttcta atcaagagtt 60 taagaaactc aagtttgata tagccaatcc gttaagagcg gaaacaaaat caaaccgtta 120 agagcggtat caaggcgaag agtttaagaa actcacaatt gcttttcttt attccttact 180 tatttacgcg ttttatttgt ttagtgttta ttttgtttgt atatttagtg cggcatattg 240 ttacgttaat ttctctgccc gcaagggcat tttctctttt tccttttctg gccttatggc 300 caaattttat tactccgaca ggcgtttagc ctgttgggct gctggaaaga accctcacct 360 tgggggttct attgagtcat ggctggcggc cattaaatct gactcctcct tccgccaaac 420 tgttaaggag gatgtacagg tgaacagatt gcagcctacg gctgtcagga tgttttcctg 480 gaaagtgggg tctgggccca ttgacaaccc ggaaaagtgc aactggcact acgtcctcac 540 gggcgaggtg ccagcgcaac cgaccgagcc ggtaaaagct cgagaggtgg tggtgccacc 600 tgtgaaggtc attccttcac cgccccctgt gccaaggcct tactttaggc cagttggggc 660 ttttgcaccg acccggtccg ggtttatacg ggccactgtg gaaagactct cccggaaacg 720 ggaagagtcg agagctgcgg cactctttgc cgaattaccc ttggagtacc cacaaggtgc 780 tccattggtt gtcccccgtg gtttcgcggc catgaggtgg acttatcatg ccacctggag 840 gcggtggtat gacgccagtg atgagcgcgc tttgcgcgtt catcctggtg gccctgctct 900 gccccccccc cccccccctc ccccaatcca aaaaccaccc tcttttgagg agaggttaca 960 ggctgctctt gaaaggcagt cctgtgctag ggcttttgcc ctagaaacct cgctaggcct 1020 taacatggcc tggctgggaa cggctgctat ccccagcact tctgtgtgct gtgctgatgg 1080 caggactact ggggggcaaa ctattgccca ggaggctgat cctattaatc atagggtcac 1140 ttccaataca gcccctggta gggcacaatg gatctcagag cgccgcagtg ctctgagaag 1200 aagggagcaa gcaaatagct tgcaaagtct tgctgctcaa actgacatga catttgagca 1260 ggccaggaat gcgtatcttg gtgctgctga catggttgag caaggcctac cgttactacc 1320 tccattgagg aatgcctacg cacctcgtgg tctatggagg ggaccttcca ctagagccaa 1380 ttatactctt gattttaggc tcaatggaat tcccaccggg caaaatactt tagaaatatt 1440 gtataatccg gtggcagatg aggaaatgga cgaataccgt gacaggggta tgtcagcggt 1500 cgtgattgat gcactggaaa ttgctatcaa tccttttgga atgccaggca atccgaccga 1560 tcttactgtc gtagcgacat atgggcatga acgtaacatg gaacgtgcct ttattggctc 1620 ttcgtcgacc tttcttggga atggtttggc gagagctatt ttctttcctg gtttgcaata 1680 tagtcaggaa gaacctaggc gcgaatctat tattcgcctg tatgttgctt ctactaatgc 1740 cactgttgat gctgattcta tattagcagc cattagtgtt ggcactctac gccagcacat 1800 tggttcgctt cataatagaa cagtggcaag ttctgtgcat gctgctcagg tgcagggcac 1860 tactttaaga gctactatga tgggtaatgc cgttgtggtt tctcctgaag gaagtcttgt 1920 gactggaacc cctgaagcta atgttcaaat tggaagtggt tctagcatgc gaatggttgg 1980 tcccctggca tgggaaaacg ttgaagaacc aggccagact tttaccataa gaaaccgctc 2040 tcggtctatg cgagtagatc ggaatgccga cgttggagtt gctcttcctc ggatgagtac 2100 tacaacgcgg ggtcttgctg gtagaggttc tgtgcaggtg cctaaagatt gccaggcagg 2160 gagatatctg aaaacccttg atcttagaga tatggtgagt gggttttcag gtatacagta 2220 tgaaaagtgg atcactgctg gacttgttat gccagatttt aaagtggtga tccgctatcc 2280 agccaatgcc ttcacgggta ttacgtgggt tatgagcttt gatgcttaca accgaataac 2340 tagtagtatc acaactactg ctagccctgc gtataccctt tcggtccctc attggctctt 2400 acatcataaa aatgggacta cctcatgtga tattgattat ggggagcttt gcggtcacgc 2460 gatgtggttt aatgccacta cttttgaaag ccctaaactt catttcacat gcctcactgg 2520 aaataacaag gaacttgctg cggattggga attcgtggtt gagttgtatg ctgagtttga 2580 ggcagcaaaa acttttcttg gaaggcctaa ctttgtttat agtgctgatg catttaatgg 2640 gtctttcaag tttttgacta tccccccact ggaatatgac ttaagtacca ccagtgctta 2700 caagagtgtg tcccttcttt tgggtcaaac tcttattgat ggaactcata aggtatataa 2760 ttataacaat acgcttttga gttactatct tggtataggt ggtgtggtca agggcagagt 2820 gcatatatgt agcccttgta cttatggcat agtcctaaga gttgttagtg aatggaacgg 2880 ggtcactaac aattggaatc aactatttaa ataccccgga tgttatatcg gtgaagatgg 2940 gaactttgag attgaaatac gttctcccta tcatcgaact ccactacgtt tattggacgc 3000 acaggcagct agtgctttta cgagtacgct gaatttctat gcgatttcag ggccaattgc 3060 cccaagtgga gaaactgcaa aaatgccagt ggtagtgcag attgatgaaa ttgcacttcc 3120 agatctttct gttccgtcct tccccaatga ttatttttta tgggtggact tttcagcatt 3180 tactgttgat gctgaagagt atgtaatagg gtccaggttt tttgatattt cctctactac 3240 tagtactgtc caccttggag ataatccttt tgcccacatg atagcttgtc atggactcca 3300 tcatggtatc cttgatctta agttaatgtg ggatttggag ggcgaatttg gaaagagttc 3360 cggtggagtt accattacaa aattgtgtgg tgataaagct actggcatgg atggtgcatc 3420 ccgtgtttgt gctttgcaaa atatgggatg tgaaactgaa ctgtacatag gtaattttgc 3480 tggtgccaat cctaattcag cattatcttt gtacagtcga tggcttgcca ttaagttgga 3540 taaggctagg agcatgaaga tgctccgaat tttatgcaag ccaagaggga attttgagtt 3600 ttatggtaga acttgtttca gagtttaaat tcccaagcgt cttgagaatc tgacgttaaa 3660 agactcattt tgtattatat ttatatttag cttgtctacc gcttatgtgt gttgtttttc 3720 atacttttag tggcgacagt gtgttgtttg tcctttggac acacttgcct tgttggacac 3780 aaaaagattt tgctttcttt ttactgcttt tatttatttt 3820 //