ID   AY017188; SV 1; linear; mRNA; STD; VRL; 1180 BP.
XX
AC   AY017188;
XX
DT   02-JAN-2002 (Rel. 70, Created)
DT   02-JAN-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Papaya mosaic virus clone YcY-22 12 kDa protein mRNA, partial cds; and 7
DE   kDa protein and coat protein mRNAs, complete cds.
XX
KW   .
XX
OS   Papaya mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-1180
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   "First report of a Mexican isolate of papaya mosaic virus in papaya and
RT   cucubirts";
RL   Unpublished.
XX
RN   [2]
RP   1-1180
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   ;
RL   Submitted (21-DEC-2000) to the INSDC.
RL   Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL   Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
DR   MD5; 5f07eb01340fc13f5d9e5db18766d0f4.
DR   EuropePMC; PMC4213569; 25337891.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Papaya mosaic virus"
FT                   /isolate="Yucatan"
FT                   /mol_type="mRNA"
FT                   /country="Mexico"
FT                   /clone="YcY-22"
FT                   /note="isolated from pumpkin"
FT                   /db_xref="taxon:12181"
FT   CDS             <1..316
FT                   /codon_start=2
FT                   /product="12 kDa protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:Q8V0Q0"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V0Q0"
FT                   /protein_id="AAG52897.1"
FT                   /translation="FLTPPPDHSKSVLAVAVGLGLALVIHFSLSYKLPTPGDNIHNLPF
FT                   GGYYRDGTKTIHYNSPGRGPKLSGPAPILLVFALIFALHVLRKRDVNDRPHHSGCPHCS
FT                   "
FT   CDS             252..458
FT                   /codon_start=1
FT                   /product="7 kDa protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V0P9"
FT                   /protein_id="AAG52898.1"
FT                   /translation="MFSGREMLMIGLTTLAALIVLNWLQTDVEKWCVVVLSGHSSTLKG
FT                   KGCELLNPDIIKAKSAHVEGLRY"
FT   CDS             489..1136
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF5; CP"
FT                   /db_xref="GOA:Q8V0P8"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V0P8"
FT                   /protein_id="AAG52899.1"
FT                   /translation="MSKSSMSSSNTPFPPITSEQMSTLKVDPTSNLLPSPEQLKSVSAL
FT                   MVAAKVPAASVTTVAMELVNFCYDNGSSAYTTVAGPSSVPEVSLAQLVSIVKASGTSLR
FT                   KFCRYFAPIIWNIRTDKTPPANWEAAGYKPNAKFAAFDFFDGVENPAAMQPPTGLIRSP
FT                   TQEERIANATNKQVHLFQAAAQDNNFASNSAFITKGQISGSSPTIQFLPPPE"
XX
SQ   Sequence 1180 BP; 302 A; 333 C; 245 G; 300 T; 0 other;
     tttcctcaca ccacctcccg accacagtaa gtcagtgtta gccgtagctg taggtttagg        60
     tttagcctta gttatacatt tttctctttc atataaatta cctacgcctg gtgacaacat       120
     tcacaatctc ccattcggtg ggtattatag ggacggaaca aaaacaattc actacaactc       180
     acctggccgt ggacccaaac tatctgggcc tgccccgatt cttctggtgt ttgccctaat       240
     tttcgctctc catgttctca ggaagagaga tgttaatgat cggcctcacc actctggctg       300
     ccctcattgt tcttaactgg cttcaaactg atgttgagaa atggtgcgtt gtagtccttt       360
     ccggacatag ctccaccctg aagggtaaag ggtgtgaatt gttgaaccca gatataataa       420
     aagcgaagtc agcccatgta gaggggctta ggtactagct gataatttga aagtttagaa       480
     tttactcaat gtcaaagtca agtatgtcct catcaaacac ccccttccca ccaatcactt       540
     ctgaacagat gtccaccctt aaagtggacc ccacttccaa cctgctgcct tcgcctgagc       600
     aattgaagtc ggtatccgct ctaatggttg ccgccaaggt tccagctgcc agtgtcacta       660
     cagtggcaat ggaactggtc aacttctgtt atgacaacgg atctagcgct tacaccacgg       720
     ttgctgggcc atcatctgtg ccggaggtct ccttagcaca gctggtcagc atagtgaagg       780
     cctctggcac ttcgctgaga aaattctgcc gatactttgc acccattatc tggaacataa       840
     ggacggacaa aactccacca gcgaactggg aggctgctgg gtacaaaccc aacgccaagt       900
     ttgccgcctt cgactttttc gacggtgttg aaaacccagc cgccatgcaa cctcccactg       960
     ggcttatcag gtcccccaca caagaggaga ggattgccaa tgccactaac aagcaagtcc      1020
     acctgttcca agcggcagca caggacaaca actttgctag taactccgcc ttcatcacca      1080
     aaggccagat atcaggatcc tcccccacca ttcaatttct tccaccccct gaataaacac      1140
     gtacttgacc cagcccgttg tttagcacta tttgaagggc                            1180
//