ID   AY017186; SV 1; linear; genomic RNA; STD; VRL; 1180 BP.
XX
AC   AY017186;
XX
DT   02-JAN-2002 (Rel. 70, Created)
DT   02-JAN-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Papaya mosaic virus clone CpT-33 12 kDa protein gene, partial cds; and 7
DE   kDa protein and coat protein genes, complete cds.
XX
KW   .
XX
OS   Papaya mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-1180
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   "First report of a Mexican isolate of papaya mosaic virus in papaya and
RT   cucubirts";
RL   Unpublished.
XX
RN   [2]
RP   1-1180
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   ;
RL   Submitted (21-DEC-2000) to the INSDC.
RL   Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL   Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
DR   MD5; 1e850abf059b73836ef3336b6dbfdc20.
DR   EuropePMC; PMC4213569; 25337891.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Papaya mosaic virus"
FT                   /isolate="Chiapas"
FT                   /mol_type="genomic RNA"
FT                   /country="Mexico"
FT                   /clone="CpT-33"
FT                   /note="isolated from papaya"
FT                   /db_xref="taxon:12181"
FT   CDS             <1..316
FT                   /codon_start=2
FT                   /product="12 kDa protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:Q8V0Q6"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V0Q6"
FT                   /protein_id="AAG52891.1"
FT                   /translation="FLTPPPDHSKSVLAVAVGLGLALVIHFSLSYKLPTPGDNIHNLPF
FT                   GGYYKDGTKTVHYNSPGRAPKISGPAPILMVFALIFALHVLRKRDVIDRPHHSGCPHCS
FT                   "
FT   CDS             252..458
FT                   /codon_start=1
FT                   /product="7 kDa protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V0Q5"
FT                   /protein_id="AAG52892.1"
FT                   /translation="MFSGKEMLLIGLTTLVALIALNWLQTDAERGCVVVLSGHSSTLKG
FT                   QRCELLHPDAIKAMSAHLKGLRY"
FT   CDS             489..1136
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF5; CP"
FT                   /db_xref="GOA:Q8V0Q4"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V0Q4"
FT                   /protein_id="AAG52893.1"
FT                   /translation="MSKSSMSSSKTPFPPITSEQMSTLKVDPTSNLLPSPEQLKSVSAL
FT                   MVAAKVPAASVTTVAMELVNFCYDNGSSAYTTVVGPSSVPEVSLAQLASIVKASGTSLR
FT                   KFCRYFAPIIWNIRTDKTPPANWEAAGYKPNAKFAAFDFFDGVENPAAMQPPTGLIRSP
FT                   TQEERIANATNKQVHLFQAAAQDNNFASNSAFITKGQISGSSPTIQFVPPPE"
XX
SQ   Sequence 1180 BP; 297 A; 333 C; 250 G; 300 T; 0 other;
     tttcctcaca ccacctcccg accacagtaa gtcagtgtta gctgtagccg taggtttagg        60
     tttagcttta gttatacatt tttctctgtc atacaaattg cctacgcctg gtgacaacat       120
     tcacaatctc ccattcggtg ggtattacaa ggacggaaca aagaccgttc actacaactc       180
     acccggccgc gcacctaaaa tatccgggcc tgctccgatc cttatggtgt tcgccctgat       240
     attcgctctc catgttctcc ggaaaagaga tgttattgat cggcctcacc actctggttg       300
     ccctcattgc tcttaactgg cttcagactg atgcggagag agggtgtgtt gtagttcttt       360
     ccggacacag ctccaccctg aagggtcaaa ggtgtgaatt gttgcacccg gacgcaataa       420
     aggcgatgtc agcccatcta aaggggctta ggtattagct aatactttga aagtttagag       480
     tttagtcgat gtcaaagtca agtatgtcct catcaaagac tcccttccca ccaatcacct       540
     ctgaacagat gtccactctc aaagtggacc ccacttccaa cctgttgcct tcacccgagc       600
     aattgaagtc tgtatccgct ctaatggttg ctgccaaggt tccagctgct agtgtcacca       660
     cagtggcaat ggaattggtc aacttctgtt atgataacgg atcgagtgct tacaccacgg       720
     ttgttggccc atcatctgtg cctgaggtct ccttggcaca gctagcaagc atcgtgaagg       780
     cctctggcac ttcactgaga aaattctgcc gatactttgc accaattatc tggaacataa       840
     ggacggacaa aactccgcca gcgaactggg aggctgctgg gtacaaaccc aacgccaagt       900
     ttgccgcctt cgactttttc gatggtgtcg aaaacccagc cgccatgcaa cctcccactg       960
     gactcattag atcacccact caagaggaga ggattgccaa cgccaccaac aaacaagtcc      1020
     atctgttcca agcggcagct caggataata actttgctag caactctgcg ttcatcacca      1080
     aaggccagat atcaggatcc tcccccacaa ttcaatttgt tccacccccc gaataaacac      1140
     gtacttgacc cagcccgttg tttagcacta tttgaagggc                            1180
//