ID AY004291; SV 2; linear; genomic RNA; STD; VRL; 4148 BP. XX AC AY004291; XX DT 29-AUG-2000 (Rel. 64, Created) DT 03-SEP-2006 (Rel. 89, Last updated, Version 4) XX DE Sesbania mosaic virus, complete genome. XX KW . XX OS Sesbania mosaic virus OC Viruses; Riboviria; Solemoviridae; Sobemovirus. XX RN [1] RP 1-4148 RX DOI; 10.1007/s007050170170. RX PUBMED; 11315633. RA Lokesh G.L., Gopinath K., Satheshkumar P.S., Savithri H.S.; RT "Complete nucleotide sequence of Sesbania mosaic virus: a new virus species RT of the genus Sobemovirus"; RL Arch. Virol. 146(2):209-223(2001). XX RN [2] RP 1-4148 RA Lokesh G.L., Gopinath K., Satheshkumar P.S., Savithri H.S.; RT ; RL Submitted (07-JUL-2000) to the INSDC. RL Department of Biochemistry, Indian Institute of Science, Bangalore, RL Karnataka 560 012, India XX RN [3] RC Sequence update by submitter RP 1-4148 RA Lokesh G.L., Gopinath K., Satheshkumar P.S., Savithri H.S.; RT ; RL Submitted (01-SEP-2006) to the INSDC. RL Department of Biochemistry, Indian Institute of Science, Bangalore, RL Karnataka 560 012, India XX DR MD5; 878d5152beacf46c227c8d6e9ee86b95. DR EuropePMC; PMC3016346; 21246040. DR EuropePMC; PMC3280281; 22355344. DR EuropePMC; PMC3791421; 23830075. DR RFAM; RF01838; sobemo_FSE. XX CC On Sep 1, 2006 this sequence version replaced gi:9931918. XX FH Key Location/Qualifiers FH FT source 1..4148 FT /organism="Sesbania mosaic virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:12558" FT CDS 77..559 FT /codon_start=1 FT /product="putative movement protein" FT /db_xref="UniProtKB/TrEMBL:Q9EB09" FT /protein_id="AAG01368.1" FT /translation="MQAQHTFTIKFLRHACFIGFEDPRVVLDHEEIDIPCEVEFDCNAE FT SVCLVRAHNQPYSEGEVKNYSVYFNSGLNDYYGPLLPVWLEIVCRVCATSYSFVLAPED FT LEDEAGRVSRKYAPCENGKVFQRAVRRATGEEYFYSCRKKVCRECIIRAARAMSSS" FT CDS 520..2238 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q9EB08" FT /db_xref="InterPro:IPR000382" FT /db_xref="InterPro:IPR009003" FT /db_xref="PDB:1ZYO" FT /db_xref="UniProtKB/TrEMBL:Q9EB08" FT /protein_id="AAG01369.2" FT /translation="MYHPSCKGYVLLLANMASFAILVDTFLMGVHNPSHVVPVVALMTL FT CATPLWLSASYVIYLLRYMLVRLSPEAKQDRVYYTATTAPYFDPALGVMMQFAPSSGGP FT SIEVQINPSWISLLGSSLKLNVGDASNESAVLGSFYSPVKAGDEPASLVAIKSGPTTIG FT FGCRTKIDGEDCLLTAHHVWCNSMRPTGLAKAGKQVSVEDWEISMSSSDKMLDFAIVRV FT PTHVWSKLGVKSTPLVCPSSKDVITCYGGSSSDCLMSGVGSSSTSEFTWKLTHTCPTAA FT GWSGTPLYSSRGVVGMHVGFEEIGKLNRGVNMFYVANYLLRSNETLPPELSIIEIPFDD FT VETRSYEFIEVEIKGRGKAKLGKREFAWIPESGKYWADEDEDELPPPPKLVGGKLVWEN FT AQETVAVENLNCQRAAGSRPLPPSLNLHATSSAKEKSPLPKACHSDLLGERLASLESCV FT EKILQKMSCEQYLPSQSSQTTLGQSEAPKLSLAPCYYKQESLILPESQQTLKELVKTSL FT SATPPPNPVAALDQKPGPSTQSLKKSVRRRNRRKSTKKPAQGSPSPASPPPTKTS" FT mat_peptide 520..1494 FT /product="protease" FT mat_peptide 1495..1725 FT /product="Vpg" FT mat_peptide 1726..2013 FT /product="P10" FT CDS 1842..3407 FT /codon_start=1 FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:Q9EB07" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:Q9EB07" FT /protein_id="AAG01370.2" FT /translation="MPLRFAGRTSCKFRELCRKDTPEDVLRAVPTFPELSDYSWPERGS FT KAELGSLLLQAGKFNPSRVPTNLEGACQNLLERYPASKPCCCLRSEAWSFDAVFEEVCK FT KAQSAEINEKASPGVPLSRLASTNKDLLKRHLQLVALCVTERLFLLSEAPDLHYLSPTQ FT LVELGYCDPVRIFVKQEPHASRKVREGRFRLISSVSLVDQLVERMLFGPQNQLEIAEWE FT RIPSKPGMGLSLDRQARSLFGDLRVKHSRCPAAEADISGFDWSVQDWELWADVEMRVVL FT GGFGQTLARAARNRFSCFMNSVFQLSDGTLIEQLQPGIMKSGSYCTSSTNSRIRCLMAE FT LIGSPWCIAMGDDSVEGWVDGAKDKYMRLGHVCKDYKPCATTPEGDLYEVEFCSHVIRA FT NRCWLASWPKTLFKYLSEAKWFFEDIERELETSPHWPRIRHYLVGNTPSPHKIGKSSPP FT YGEKAFETTVSQGYSEHSGDATPAESWAEAKPEEAAFCCAAASAYPGWNIHGPVCSGCY FT GADS" FT mat_peptide 2014..2235 FT /product="p8" FT CDS 3217..4023 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q9EB06" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="PDB:1SMV" FT /db_xref="PDB:1VAK" FT /db_xref="PDB:1VB2" FT /db_xref="PDB:1VB4" FT /db_xref="PDB:1X33" FT /db_xref="PDB:1X35" FT /db_xref="PDB:1X36" FT /db_xref="PDB:2VQ0" FT /db_xref="PDB:2WLP" FT /db_xref="PDB:4Y4Y" FT /db_xref="PDB:4Y5Z" FT /db_xref="UniProtKB/TrEMBL:Q9EB06" FT /protein_id="AAG01371.1" FT /translation="MAKRLSKQQLAKAIANTLETPPQPKAGRRRNRRRQRSAVQQLQPT FT QAGISMAPSAQGAMVRIRNPAVSSSRGGITVLTHSELSAEIGVTDSIVVSSELVMPYTV FT GTWLRGVAANWSKYSWLSVRYTYIPSCPSSTAGSIHMGFQYDMADTVPVSVNQLSNLRG FT YVSGQVWSGSAGLCFINGTRCSDTSTAISTTLDVSKLGKKWYPYKTSADYATAVGVDVN FT IATPLVPARLVIALLDGSSSTAVAAGRIYCTYTIQMIEPTASALNN" XX SQ Sequence 4148 BP; 959 A; 965 C; 1116 G; 1108 T; 0 other; cacaaaatat aagaaggaaa gctggatttc ctacctttgt gtttccattg tcgaagcatt 60 ggtcaaaccc tatttgatgc aagctcagca tactttcacc atcaaatttc tgagacacgc 120 gtgcttcatt ggttttgagg accctagagt tgttcttgac cacgaagaga tcgatattcc 180 ctgtgaagtg gaatttgatt gcaacgctga gtccgtttgt ttggtgagag cccacaacca 240 accgtatagc gaaggagaag ttaagaacta ttctgtttac tttaacagtg gtcttaacga 300 ctactacggc ccactactcc ctgtttggtt agagattgtg tgccgggtgt gtgctacctc 360 ttattccttt gtcttggcac cagaggatct ggaagacgag gctggtcgag tttcgaggaa 420 gtacgctcct tgtgaaaacg ggaaagtgtt tcagcgggct gtgcggcgcg caacaggaga 480 ggaatacttc tattcgtgtc gaaagaaagt ttgccgagaa tgtatcatcc gagctgcaag 540 ggctatgtcc tcctcctagc caatatggca agcttcgcga tccttgtgga cacgttcctt 600 atgggggtgc acaacccctc acacgttgtc ccggtggtgg cattgatgac tttgtgcgct 660 actccgcttt ggttgagcgc ctcatacgtg atttacctgc tcaggtacat gttggtgagg 720 ttgtctcctg aggcaaagca ggacagagtc tactataccg ctactacagc accgtatttc 780 gatccggcgc tgggggtcat gatgcaattt gctccgagca gcggtgggcc gagtattgaa 840 gttcaaatca acccttcatg gataagtctg ttgggtagct cccttaagtt aaacgtaggt 900 gatgcttcca atgagtctgc tgtgttgggg tccttctact cacccgttaa agctggagat 960 gaaccagcaa gcttagtggc tatcaagagt ggacctacta ctattggttt tggttgtaga 1020 actaagatcg atggtgagga ctgcttattg actgcccatc acgtgtggtg taattcgatg 1080 cgccctactg gcctggcgaa agctggcaag caggtttctg ttgaggattg ggagatttcc 1140 atgtcctcca gtgataagat gctcgatttc gccatagtga gagtaccgac tcatgtctgg 1200 tctaagcttg gggtcaaatc caccccgctg gtttgcccgt cgagcaaaga tgtcataact 1260 tgttatggtg gttccagttc tgactgcctg atgagcggtg ttggttctag ttcaacttct 1320 gagtttactt ggaagttgac ccacacctgt cctacagctg ccggttggag cggtacgccg 1380 ctgtattcaa gtagaggcgt ggttggaatg cacgtcggtt ttgaggaaat aggaaaactc 1440 aaccggggtg taaacatgtt ctatgttgcg aattacctct taaggtctaa tgagactctc 1500 ccaccggagc tttccattat tgaaatacct tttgatgatg ttgagacccg gagttatgag 1560 tttattgagg ttgagataaa aggtagaggt aaggctaaac ttggtaagcg tgagttcgct 1620 tggattccag aatcaggcaa gtactgggct gatgaggatg aagatgagct gccacctcct 1680 ccaaagttgg tgggcgggaa gttagtgtgg gaaaacgctc aagagaccgt cgctgttgag 1740 aatttaaact gccagcgggc ggcagggtca aggcccttgc cgccctcttt gaacttgcat 1800 gctacgagtt ccgcgaagga gaagtcgcct cttccaaagg catgccactc cgatttgctg 1860 ggagaacgtc ttgcaagttt agagagctgt gtagaaaaga tactccagaa gatgtcttgc 1920 gagcagtacc taccttccca gagctctcag actactcttg gccagagcga ggctccaaag 1980 ctgagcttgg ctccttgtta ttacaagcag gaaagtttaa tccttccaga gtcccaacaa 2040 accttgaagg agcttgtcaa aacctccttg agcgctaccc cgcctccaaa ccctgttgct 2100 gccttagatc agaagcctgg tccttcgacg cagtctttga agaagtctgt aagaaggcgc 2160 aatcggcgga aatcaacgaa aaagccagcc caggggtccc cctctcccgc ctcgcctcca 2220 ccaacaaaga cctcttgaag aggcatttgc aacttgttgc tctctgtgtt actgaaagac 2280 tcttcttact tagcgaggcg ccagatttgc attacttgag tcccactcag ttggttgagt 2340 tagggtattg cgatccagtg cgcatctttg ttaagcagga gccccacgcc tcccgaaagg 2400 tgagagaggg tcgattccgc ttgatttcat cagtctcgtt ggttgatcag ctagttgagc 2460 gcatgctctt cgggccgcaa aatcagcttg agatcgctga gtgggagaga attccgtcta 2520 agcctgggat gggcctgtca cttgataggc aagctcgcag cttgtttggc gacttgagag 2580 ttaaacactc tcgttgccct gctgctgagg ctgacatctc gggttttgac tggtctgtgc 2640 aagactggga gctgtgggct gatgttgaga tgagagtagt tctaggcggc tttggccaga 2700 cattggctag ggctgctagg aataggtttt cgtgtttcat gaactcagtc ttccagttat 2760 ctgacggtac attgattgag caactgcagc cgggaataat gaagtctgga tcttactgca 2820 cctcctcaac caatagcaga attcgttgcc ttatggctga gctcattggc tccccatggt 2880 gtattgctat gggtgatgat tctgttgaag gatgggttga tggcgcaaag gacaagtaca 2940 tgaggctagg ccatgtttgc aaggattaca agccttgcgc cacgactcct gaaggcgacc 3000 tatacgaggt agagttctgc tcacacgtta ttagggctaa caggtgttgg ttggcttcat 3060 ggcccaagac tctgtttaaa tacttgtctg aagctaagtg gttctttgag gatatcgagc 3120 gcgagcttga aacttcgccc cactggccta gaatcagaca ctatctagtg gggaatactc 3180 catcgcccca caaaattgga aaatcaagtc ctccctatgg cgaaaaggct ttcgaaacaa 3240 cagttagcca aggctatagc gaacactctg gagacgccac cccagccgaa agctgggcgg 3300 aggcgaaacc ggaggaggca gcgttctgct gtgcagcagc ttcagcctac ccaggctgga 3360 atatccatgg ccccgtctgc tcagggtgct atggtgcgga ttcgtaatcc cgctgtgagt 3420 agctcgcgcg ggggaatcac agtcttgacc cattctgaac tctcagctga gatcggagtg 3480 acggactcga tagtggtttc ctctgagctt gtgatgccct acacagtggg cacttggctt 3540 cgaggcgttg ctgctaattg gtctaagtat tcgtggttga gtgttcggta tacgtacatt 3600 ccctcttgtc catcgagtac tgctggttct atccatatgg gtttccagta tgacatggcg 3660 gacacggtgc cggtatcagt taaccagttg tctaatctga ggggttacgt ttctgggcag 3720 gtctggtcag gttctgcagg actgtgtttc attaatggaa caaggtgttc tgacacttcc 3780 accgctatct ccaccacttt ggatgtgagt aagcttggca agaagtggta cccgtataag 3840 accagcgcag attacgcgac cgctgttggc gttgacgtca acattgctac tcccctggtc 3900 ccggctaggc tagtgatagc tctgctggat gggtcgagtt ccacagctgt ggctgctgga 3960 cgcatttact gcacctatac aatacagatg atcgaaccaa ctgcctcagc cctgaacaac 4020 tgagaagttg taaaacattg gaaggcttcc ctttggaaag gaggctggat cttcacaaat 4080 ccaccgaggt tttggaatgg aatgctcgtt aaatccattc ccgcgagaaa ttggcgcgta 4140 atccaaat 4148 //