ID AM992534; SV 1; circular; genomic DNA; STD; VRL; 2725 BP. XX AC AM992534; XX DT 04-JUN-2008 (Rel. 96, Created) DT 07-OCT-2008 (Rel. 97, Last updated, Version 2) XX DE Tomato leaf curl Palampur virus segment B, complete sequence XX KW . XX OS Tomato leaf curl Palampur virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2725 RA Kumar Y.; RT ; RL Submitted (02-MAY-2008) to the INSDC. RL Kumar Y., Floriculture Division, Institute of Himalayan Bioresource Tech., RL P.O. Box 6, Palampur, Distt. Kangra, 176061, INDIA. XX RN [2] RX DOI; 10.1007/s11262-008-0286-1. RX PUBMED; 18792773. RA Kumar Y., Hallan V., Zaidi A.A.; RT "Molecular characterization of a distinct bipartite begomovirus species RT infecting tomato in India"; RL Virus Genes 37(3):425-431(2008). XX DR MD5; 06249c03278468eedab7707c8568a753. DR EuropePMC; PMC3120783; 21496256. DR EuropePMC; PMC3125359; 21676270. DR EuropePMC; PMC5775426; 29352245. XX FH Key Location/Qualifiers FH FT source 1..2725 FT /organism="Tomato leaf curl Palampur virus" FT /host="Solanum lycopersicum" FT /isolate="Palampur" FT /mol_type="genomic DNA" FT /country="India:Himachal Pradesh" FT /collected_by="Yogesh Kumar" FT /collection_date="30-Dec-2006" FT /identified_by="Yogesh Kumar" FT /tissue_type="leaf" FT /db_xref="taxon:526476" FT CDS 428..1234 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:B3CL31" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:B3CL31" FT /protein_id="CAQ52362.1" FT /translation="MAFPSPYTTPRRLGSSYPRRYNGTRSVRFWKFRKSQPWLRHRPSA FT SSSRSATELFGEPISKQYTRKEICETQQGSEYVLQNNRYMTSYVTYPSKTRTGTNNRVR FT SYIKLKSLNLSGTFAIRSTEMMQDVDQSGGLYGVMSVVVVRDKSPKIYSTAQPLIPFLD FT IFGSVNACRGTLKVAERHRDRFVVLNQSSIIVNTPHTNTMKKFCIRNCIPKTYTTWVTF FT RDEEEDNCTGLYSNTLRNAILIYYVWLSDVPSQVDLYSNVILNYIG" FT CDS complement(1301..2146) FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:B3CL32" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:B3CL32" FT /protein_id="CAQ52363.1" FT /translation="MSIRNDREGLSVGGYVQSERVEYALTNDAAEVKLTFPSMFEQKIS FT QLRNRCMKIDHIVLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFNIPIKCNCNLHY FT YSSSFFSLKDLNPWRVEYRVENTNVVDGVHFCRILGKLKLSSAKHSTDVEFRPPKIEIH FT SKEFTLNDIDFWSVGSKPQTRRLVDGSRLIGHSSRSLRVPYLTIGPNESWASRSEIGHS FT SVTSRPYKNLSGLDDSAIDPGPSASQAGSITREEIADIISKTVEQCIKSNVNAPLSKGV FT " XX SQ Sequence 2725 BP; 781 A; 561 C; 517 G; 866 T; 0 other; accgaaaggc cccggtttcc tggcaattca tcttagccgt tcttttttgt ctttctcata 60 atcctaacgg ttgtatttgt aacacgtgtt tatttggcag gctttattca tttaaagccg 120 tagcccgcgt tttagtgttg cgcattgtgg tccattcatt aatgcttatt tattgctttt 180 atgtggtccc gcgcactact aaaaagacgt tcaataaatc aaaatcatct gacaacgttt 240 ctttttattg atcggccaag atcaataggt aattgcttcg aaatttccaa ccgtccgatt 300 attgatattt gctttaattc aaacattatt tgtttgaatt ttatgtgttc ctcgacgtgc 360 ataatttccc tttataaacc ctaccattca tcaatgtctg aataggtttt tatacgtctt 420 tatctaaatg gcttttcctt ctccttatac cacccctcgt cggttaggtt catcctatcc 480 gagacggtac aacggaacca gaagcgtgag attctggaaa ttccgtaaat ctcagccatg 540 gttacgtcat cgtccaagtg catcgtcttc cagatctgct actgaactgt ttggagagcc 600 catctccaaa caatatacgc gtaaggaaat atgtgaaact caacaggggt cggaatatgt 660 tttgcagaac aatcgatata tgacctctta cgttacatat ccatctaaaa ctagaacggg 720 aacgaacaac cgagttcgtt cgtacatcaa gttaaaaagt ctgaacttat ctggaacttt 780 tgccattcgc agtactgaaa tgatgcagga cgtcgaccag agtggtggtt tatatggtgt 840 gatgtcagta gttgtcgtca gggataaatc gcctaagatt tattctactg cccaaccatt 900 aatcccgttt ctagatatat tcggatcggt aaacgcttgc aggggaacat tgaaggtggc 960 ggaacgccac cgcgatagat ttgtagtttt gaatcagtct tcaataattg ttaatactcc 1020 acatactaac actatgaaaa aattctgcat tcgcaattgc atcccaaaaa cctatactac 1080 ttgggtcacg ttccgcgacg aagaagagga caattgcact ggactgtact ctaacacact 1140 gcgaaatgct atacttattt attatgtatg gttaagcgat gtaccctctc aagtcgattt 1200 gtatagtaat gtaattctta attatattgg ctgattaaat gtatcaattc ttaaaaaatg 1260 cacccgtaat gcaaaagaaa taaatttgac ataaaattta ttagacgccc tttgaaagtg 1320 gagcatttac attggatttt atacattgtt ctactgtttt tgaaattata tctgcaattt 1380 cttctctcgt aatacttcct gcttgtgacg ccgaaggacc aggatcgatt gcggaatcgt 1440 ccagtccgct taagttcttg taaggtctgc tggtgacgga cgaatgtccg atctctgatc 1500 tgctagccca tgactcgttc ggacctatcg tcagatatgg tacccttaac gatctagaac 1560 tgtgtccgat taatcgtgaa ccatccacca aacgtcttgt ctgtggtttc gaacccacag 1620 accagaaatc aatgtcgttt aatgtgaatt ccttgctatg tatttcaatt ttcggtggtc 1680 ggaattcgac gtcagtcgaa tgttttgccg acgatagctt caatttaccc aaaatcctgc 1740 agaagtgaac tccatctacg acgtttgtgt tctccaccct atattcaact cgccaaggat 1800 ttaaatcctt gagagagaag aacgaagaag agtagtagtg caggttacaa ttgcatttga 1860 tgggaatatt aaactcagcc tgtttcgtgt ccccttccgt taacctcatg tcgtgtattt 1920 caatcacgac atgtccaact gcattaatgg gtacctgact gcggtattct agtacgatgt 1980 gatcaatttt catgcatctg tttcgtaatt ggcttatttt ctgctcgaac atcgacggaa 2040 acgttaattt aacctctgca gcatcgtttg tgagcgcgta ctcaacgcgt tcagactgaa 2100 cgtatcctcc cacggacaaa ccctccctat catttcttat tgacatattg gaagcgcagc 2160 gaaaaaggga gcgcagcgga tatgcagtaa aacctgcgaa cacaaagaac tacagagctt 2220 gagggaggaa atgaaatgct aaaatcaacg aagttgtatt ttgttagcaa cgacgaacat 2280 tgttttataa tgtctctaga gtcatgtcgt aatcaaatca aacaaactca aacggacggc 2340 acagatttta tggagtaaaa gctattgtgc ctatgcaact ttaatgaatt agggttttgc 2400 tatatcttct tcattttgtg ataccataaa ttggtaacaa tttatgagtt gtttgcaata 2460 tatgtatgtt cctgaaaaaa tggaagccca tatattacag gcccaatcca aaagcttcag 2520 gtcatatttt aaaacgacct cgttttaaag gagaaaagtt aatgcgtcta gagagaagtc 2580 acattttctc tctctaaaat ccatccggtg tctctcaact tcttgtatta tattggtgtc 2640 tggggtccta tatatactta aaaccctaaa tggcataaat gtaaatttag agaaaactac 2700 taaggggcct ttcgtatata atatt 2725 //