Dbfetch
ID AM950268; SV 1; circular; genomic DNA; STD; VRL; 2746 BP. XX AC AM950268; XX DT 01-APR-2010 (Rel. 104, Created) DT 20-JUN-2013 (Rel. 117, Last updated, Version 3) XX DE Mungbean yellow mosaic India virus segment DNA A, complete sequence, clone DE MI15 XX KW complete virus segment. XX OS Mungbean yellow mosaic India virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2746 RA Ilyas M.; RT ; RL Submitted (28-MAR-2008) to the INSDC. RL Ilyas M., Plant Biotechnology, Nibge, P.O Box. 577, Jhang Road Faisalabad, RL 38000, PAKISTAN. XX RN [2] RX DOI; 10.1099/vir.0.020404-0. RX PUBMED; 20375225. RA Ilyas M., Qazi J., Mansoor S., Briddon R.W.; RT "Genetic diversity and phylogeography of begomoviruses infecting legumes in RT Pakistan"; RL J. Gen. Virol. 91(Pt 8):2091-2101(2010). XX DR MD5; ef5d9f4be358aaf085669ce34d8dedcd. XX FH Key Location/Qualifiers FH FT source 1..2746 FT /organism="Mungbean yellow mosaic India virus" FT /segment="DNA A" FT /mol_type="genomic DNA" FT /country="Pakistan:Islamabad" FT /isolation_source="Mungbean" FT /collected_by="Muhammad Ilyas" FT /clone="MI15" FT /tissue_type="Leaf" FT /db_xref="taxon:223287" FT CDS 156..497 FT /gene="AV2" FT /product="Pre-coat" FT /db_xref="GOA:Q80P67" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:Q80P67" FT /protein_id="CAQ34822.1" FT /translation="MWDPLLNDFPKSVHGFRCMLAIKYLQQVQENYPSNSVGYSYLTGL FT IQVLRIRNHAKADLRYCLLYPDIECTEEIELRYPAHAPCLCGRCPYQHEKKALDQPPHV FT EETSVLPTV" FT CDS 316..1089 FT /gene="AV1" FT /product="Coat protein" FT /db_xref="GOA:Q1KWZ1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q1KWZ1" FT /protein_id="CAQ34823.1" FT /translation="MPKRTYDTAFSTPISNARRRLNFDTPLMLPASAGGVPTNMKRRRW FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGNGITH FT RIGKRFCIKSVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE FT PSTATVKNDLRDRYQVLRKFNATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(733..984) FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:D4YWD4" FT /protein_id="CAQ34824.1" FT /translation="MVLILRCLLVVVNNIIINFEKTIHHGLFFTSILATSNGGIKLSQY FT LITITQIVLHSSCTGLVVIHVEHLTKIHGCTKWSSVTT" FT CDS complement(1086..1490) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:D4YWD5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D4YWD5" FT /protein_id="CAQ34825.1" FT /translation="MDFRTGEYITAAQLRSGVYIWEVQNPLSFKIMHHSPIRAGSRMML FT TKLRIMFNHRLKKALGMHKCFLELKLFHYLTATSGMILSIFRNQLFRFLNNLGVISLAN FT ILYFASDFLYNKLHLVEDVSFTHNVQYKLY" FT CDS complement(1228..1680) FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:D4YWD6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D4YWD6" FT /protein_id="CAQ34826.1" FT /translation="MKRTMLRLNSGLQRMRNSTPSKNHCSPPSIKVQHKVAKKRAIRRS FT RIDLTCGCSYYIHINCRNYGFSHRGVHHCSSTQEWRLYLGGAKSPLFQDHAPQSNSSRV FT QNDAHQAAHNVQPQVEESTGDAQVLPGIEALPLFDGDFWDDLIHLP" FT CDS complement(1538..2626) FT /gene="AC1" FT /product="replication initiation protein" FT /db_xref="GOA:D4YWD7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D4YWD7" FT /protein_id="CAQ34827.1" FT /translation="MPREGRFAINARNYFLTYPKCPLTKEDALEQLLALSTPVNKKFIR FT ICRELHEDGQPHLHVLLQFEGKHQTRNQRFFDLHSRCRSAYYHPNIQAAKSCSDVKTYM FT EKDGDVLDHGTFQIDGRSARGGKQSANDAYAEALNSGSKLEALLILKEKAPKDFILQFH FT NLNCNLSRIFTEPVQAYVSPFTLESFDKVPSYISSWAERNVRDPAARPDRPISIVIEGD FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNVKYGKPTKIKGGIPTIFLCNPGPKSSYKEYLDEENNAALKQWASKNAEFYTLKEPL FT FSSVNQGSTQGRQEESNSTISN" FT CDS complement(2176..2475) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D4YWD8" FT /protein_id="CAQ34828.1" FT /translation="MKMDSLISMFCFSSKGSTKRETKGSSTSIPDADRHITIRTFRQLK FT AAQTLKHTWRKTETSLIMELSKSMADQLEEVNNLPTTHTPRHSILDQSWRPSLY" XX SQ Sequence 2746 BP; 731 A; 580 C; 619 G; 816 T; 0 other; acctgagtgc cccgcgaccg gtgtattggg gttgctttag cttttttgct ttttgggtac 60 ccttatcttt agtcgttcaa tcagaagcgc tcctcagcgc tatgttaatt caaatttgaa 120 ttataaagca tgtgcacact ctgaacccac taacaatgtg ggatccattg ttgaacgact 180 ttcccaaatc agtgcatgga ttccggtgca tgttggcaat aaagtatttg cagcaagttc 240 aagagaatta cccctctaat tctgttggtt attcgtacct tacagggtta attcaggtat 300 tgcgcatccg gaatcatgcc aaagcggacc tacgatactg ccttctctac cccgatatcg 360 aatgcacgga ggagattgaa cttcgatacc ccgctcatgc tccctgcctc tgcgggaggt 420 gtccctacca acatgaaaag aaggcgttgg accaaccgcc ccatgtggag gaaacctcgg 480 ttttaccgac tgtataggtc ccctgatgtc cctcgtggtt gtgagggacc atgtaaagtt 540 caatcatttg agcagaggca tgatattgcc cacacaggca aagtgatttg catatcggac 600 gtgactagag gtaatggaat tacacatcgt attggcaaac gtttttgcat caagtccgtt 660 tacattactg ggaaggtttg gatggacgaa aacattaagt ccaaaaatca cacgaacact 720 gtgatgttca agttatgtcg tgacagacga ccatttggta cacccatgga ttttggtcaa 780 gtgttcaaca tgtatgacaa cgagcccagt acagctactg tgaagaacga tctgcgtgat 840 cgttatcaag tattgcgaaa gtttaatgcc accgttactg gtggccaata tgcttgtaaa 900 gaacaagcca tggtgaatcg ttttttcaaa gttaataatt atgttgttta caaccaccag 960 gaggcagcga agtatgagaa ccatactgag aacgcattat tattgtatat ggcatgtact 1020 catgcctcaa atcctgtgta tgcaactctt aaaattcgga tctattttta cgattcgata 1080 ttgaattaat aaagtttgta ttgaacatta tgcgtaaagc ttacatcctc caccaggtgg 1140 agtttattgt acaggaaatc cgaagcgaaa tataaaatat ttgctaagct aatgacccct 1200 aaattattta gaaacctaaa taattggtta cggaagatgg ataagatcat cccagaagtc 1260 gccgtcaaat agtggaagag cttcaattcc aggaagcact tgtgcatccc cagtgctttc 1320 ttcaacctgt ggttgaacat tatgcgcagc ttggtgagca tcattctgga ccctgctcga 1380 attggactgt ggtgcatgat cttgaaagag aggggatttt gcacctccca gatatagacg 1440 ccactcctga gttgagctgc agtgatgtac tcccctgtgc gaaaatccat agttacggca 1500 gttgatatgg atgtaatagc tacacccaca ggttagatca attcgagatc gtcgaattgc 1560 tctcttcttg gcgaccttgt gttgaacctt gattgacgga ggagaacagt ggttctttga 1620 gggtgtagaa ttccgcattc tttgaagccc actgtttaag cgcagcattg ttctcttcat 1680 ccaagtactc tttataggag gacttgggac cagggttaca cagaaagatg gtggggatac 1740 cacctttaat tttagtgggc ttcccgtact tgacgttaga ctgccagtct ctttgcgcgc 1800 ccatgaattc tttgaaatgt ttcaaataat gtggatcaac gtcatcgatg acgttgtacc 1860 atgcctcgtt agagtatgtt ttgtcgttta gatccaaatg gccgcaaaga taattatgag 1920 gaccaatggc acgtgcccac atggttttac ccgtgcgact atctccttca ataacgatac 1980 taataggtct atctggccgc gcagcgggat ctctcacatt tctttcagcc catgaagaaa 2040 tgtagcttgg aaccttgtcg aatgactcta atgtaaaagg cgacacatat gcctggacag 2100 gctctgtgaa tatccgagac aaattacaat ttaaattatg aaattgtaaa ataaaatctt 2160 ttggagcctt ttcttttaat ataaggaggg cctccaactt tgatccagaa ttgagtgcct 2220 cggcgtatgc gtcgttggca gattgtttac ctcctcgagc tgatcggcca tcgatttgga 2280 aagttccatg atcaaggacg tctccgtctt tctccatgta tgttttaacg tctgagcagc 2340 ttttagctgc ctgaatgttc ggatggtaat atgccgatct gcatctggaa tggaggtcga 2400 agaacctttg gtttctcgtt tggtgcttcc cttcgaactg aagcagaaca tggagatgag 2460 gctgtccatc ttcatggagt tcacgacaga tgcgtatgaa cttcttgtta actggtgttg 2520 acaaggctag aagttgttca agagcgtcct cctttgtaag aggacatttg ggatatgtca 2580 agaaatagtt tcttgcgttt atagcaaaac gaccttccct gggcattttt gaagtcgttt 2640 ttgtatcggt gtacaccgat tacttctcta tccccctatc ggtgtatcgg tgtactatat 2700 atactagagc tactaaaagc ccataggggc actcagctat aatatt 2746 //